prot_H-elongata_contig1799.4781.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1799.4781.1
Unique Nameprot_H-elongata_contig1799.4781.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length189
Homology
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BLAST of mRNA_H-elongata_contig1799.4781.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.600e-7
Identity = 46/162 (28.40%), Postives = 73/162 (45.06%), Query Frame = 0 
Query:   30 LFALAIKSCNTRMVKWVAGLINRNYPDSKEAWDRLRGHKAEKSSLAYAASTPPTAKNNGEHMFDTVLWCLKKAAGNMYDDQRLEGTNPRPTKKEYVNALLRRELAV----TREPRVRGKLSQVSPLGGAMLQSNQVLFRRVYDTYVECGG-RWNRQQVLDQL 186
            LF  A+ S     V WV   + + YP  KE W  +RG + + ++L  A+S+    +  G  +   V  CL++AA       + E   P    K      L R L +    ++        S  +PL GA L  N VLF+++Y+ Y      RW+R+++L  L
Sbjct:  445 LFGQAVLSGKAEAVLWVYQFLAQRYP--KELWKNVRGAQDKINALTCASSSSMKCERQGVEVLVAVYSCLQEAA-------KYEFGTPEDVTKNLKELFLSRSLPMKPTGSKSSARTTVESSSTPLAGAALSGNWVLFQKIYEMYERLTDQRWSREELLRHL 597
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1799.4781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JB40_9PHAE4.600e-728.40Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1799contigH-elongata_contig1799:6511..7985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1799.4781.1mRNA_H-elongata_contig1799.4781.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1799 6355..7985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1799.4781.1 ID=prot_H-elongata_contig1799.4781.1|Name=mRNA_H-elongata_contig1799.4781.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
MLPRRFVVRSIPPTQTIMLIARRCYRRKCLFALAIKSCNTRMVKWVAGLI
NRNYPDSKEAWDRLRGHKAEKSSLAYAASTPPTAKNNGEHMFDTVLWCLK
KAAGNMYDDQRLEGTNPRPTKKEYVNALLRRELAVTREPRVRGKLSQVSP
LGGAMLQSNQVLFRRVYDTYVECGGRWNRQQVLDQLREE
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