mRNA_H-elongata_contig17903.4735.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: D7FP22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP22_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 2.940e-142 Identity = 188/240 (78.33%), Postives = 219/240 (91.25%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLKLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVTWMNAP 720
+ FNMTGG+K+ LCV +LK+D++AL A+KED+KRDDD+DGIPDV+QISPEKLLTRKTALALRVINPDRATNA+TGIWQGYM VLV+LKFRFAKV+ LAVSIGNN+RP VAKI GP+LAFV+P+EYHQWIAPMINY CKFVAMT+AWWIQR +STVQSAI+GGLLFSRSL+ F+S+ T LKLDPD +F+DE++GWTLAACGAYFQ S NWDLPW VDL LWPAY+LE FL+WSVTWM+ P
Sbjct: 148 EAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVINPDRATNAITGIWQGYMGVLVVLKFRFAKVVALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDHSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLFLWPAYLLETFLKWSVTWMDVP 387
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A835Z0S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S9_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.340e-86 Identity = 123/242 (50.83%), Postives = 179/242 (73.97%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLKLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVTWMNAPPT 726
+ F GG ++ + +LK D + ++ ANK+D++ DD+ +GI DV++I +L++RK L LR ++PDR +A+ G+++G+ VLV+L+FRFA+VI LAVSI ++MRP ++IL P LAF++PKEYH+WI+ MIN LC+ VA TIAW IQR +ST+QSAI+GGL+F+R+L+RF+ + + D + T++DEI+GW LAA G Y QI NW+LP VDL LWP +V E L WSVTWM+A P+
Sbjct: 103 EAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMDASPS 344
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A7S1REG4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1REG4_ALECA) HSP 1 Score: 216 bits (549), Expect = 9.570e-66 Identity = 97/239 (40.59%), Postives = 152/239 (63.60%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLKLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVTWMNA 717
+ F GG ++++C+++L E A+ A+ D + D D DG+ DV+Q+ +L+ RK AL ++ I+P+ A G+W YM VL +LKF+FA+ I LA SI N+RP +AK+LGP+L V P +Y +WI+P ++ LCK VA +AW +++ +TVQS GGL+ SR+LL + + + + D+T +DE+VGW + ACG Y Q+ +P + L WP VLE L+W+V W++A
Sbjct: 79 EAFRSMGGSQVYVCLQDLGEQGRAVWVAHVADEEEDADADGVADVRQLEGGRLVARKAALVMKTIDPETVARAAGGLWTAYMGVLTVLKFQFARTIALAESIAQNLRPAMAKVLGPTLVAVTPPDYRKWISPAVSLLCKLVAGAVAWKVKQLAATVQSGFCGGLIASRALLELMRERRLVSVADDETLLDEVVGWCVGACGIYVQLFRGGPVPAILSPLFWPLDVLERVLQWNVAWVDA 317
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A8J2ETN3_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2ETN3_9DINO) HSP 1 Score: 213 bits (541), Expect = 4.840e-64 Identity = 104/239 (43.51%), Postives = 156/239 (65.27%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLK-LDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVTWMN 714
+ F M+GGDKI C +++ E+ LR N+ED+ D DNDGI DV QIS +L+ RK L + I+PD+ + A+ G++QG++SVL+ +KF+FA+ + LAVS+ R A +L P LA +P + WI I+YL K VA+ AW +Q+ V VQSAI GG +F+++LL F+S ++ +D D+T +DE +GW +AACG YFQ+ H + L + L+L+P ++E LEW VTW+
Sbjct: 130 EAFKMSGGDKISACWKDICEEYAVLRDRNQEDDVEDLDNDGIADVLQISQRELMQRKIKLVVSSIDPDKVSGAVGGLYQGFLSVLMTVKFQFAQSVALAVSMAEKARKPCAVVLTPLLATALPPDSEDWIVAFIDYLTKTVALLFAWTLQKMVCAVQSAIAGGHIFAQNLLYFLSKKLGVENIDLDETMVDEYIGWAIAACGIYFQLIHGFSLSFPFSLILFPLNIVEFALEWVVTWLG 368
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A8J1Z0D1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z0D1_9DINO) HSP 1 Score: 209 bits (531), Expect = 1.800e-62 Identity = 102/239 (42.68%), Postives = 155/239 (64.85%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLK-LDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVTWMN 714
+ F M+GGD I C ++ E+ L N+EDN+ D DNDGI DV QIS +L+ RK L + I+PD+ T A+ G++QG++SVL+ +KF+FA+ I LAVS+ R A +L P LA +P WI I+YL K +A+ AW +Q+ V VQSAI+GG +F+++LL F+++ ++ +D D+T +DE +GW +AA G YFQI H + L + ++L+P ++E LEW+VTW+
Sbjct: 136 EAFKMSGGDTIEACWNDICEECSLLVEKNEEDNEEDLDNDGIADVLQISQRELMQRKVKLVVTSIDPDKLTKAVGGLYQGFLSVLMTVKFQFAQAIALAVSMAEQARKPAAVVLTPILASALPPNSEDWIVTAIDYLTKTIALLFAWTLQKMVCAVQSAIKGGHMFAQNLLLFLANKLGVENIDLDETMVDEYIGWAIAAMGVYFQIVHGFALVFPFSIVLFPLNIIEFSLEWTVTWLG 374
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A813D688_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D688_POLGL) HSP 1 Score: 204 bits (518), Expect = 1.290e-60 Identity = 99/240 (41.25%), Postives = 152/240 (63.33%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSL-KLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVTWMNA 717
+ F GGD++ +C+++L+ DL ++ +A +++ D +S EK ++ AL +R ++P R + AL+G+W GYM V++ LK+ FA+ + A SIG+N+RP AK+L P+ V P EY QW+ P IN CK VAM +AW +Q+ VS+VQS+I GGLL SR L ++ + L + +DT IDEI+GW LA+ G YFQI +P + +LWP V E++L+WSVTW+ +
Sbjct: 137 EAFKTAGGDQMLVCLQDLQADLVSVLQAQEDE-----------DEASLSGEKKASKTLALVMRTVDPGRLSMALSGVWAGYMGVVLALKYNFARTLAFAHSIGDNLRPVAAKLLAPTALSVTPPEYRQWVGPAINLGCKCVAMAVAWKLQQVVSSVQSSISGGLLASRCFLPYLMSSGLLASRNLEDTMIDEILGWGLASAGMYFQIIKGGSVPLLLAPILWPMGVAESWLQWSVTWLGS 365
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A7S2RLK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK5_9STRA) HSP 1 Score: 193 bits (490), Expect = 3.240e-56 Identity = 88/235 (37.45%), Postives = 149/235 (63.40%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLKLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVT 705
+ + GG + + R+L + + + + ED+ +D+D DGI DV QIS ++L RK +AL +PD+ A+ GI+ G++ V+ +LK +FAK I L +IG+ + ++ P L ++P++YH+WI ++ Y+CK +A++IAW++QR +S SAI GGLL SR +L F++ + + ++++DEIVGW+LAA G YFQ + +P+ +LLLWP V E ++ W+V+
Sbjct: 150 EAWQQAGGRRAYENARDLYIEFKRVMHKSAEDDLKDEDGDGIADVDQISGKELFMRKAHIALTTCDPDKLNGAIQGIYTGWVGVIAVLKIQFAKTIALGSAIGDFLYSPALRVATPVLVHLIPEDYHRWIPSLVLYVCKSIALSIAWYVQRVISAFHSAIRGGLLCSRGVLNFMNSRGIIDFNDTESYLDEIVGWSLAAAGFYFQFMMGFSMPFPFNLLLWPFGVAEWYIVWTVS 384
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A7S2VT12_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VT12_9DINO) HSP 1 Score: 184 bits (467), Expect = 3.890e-53 Identity = 92/227 (40.53%), Postives = 137/227 (60.35%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLKLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLE 681
+ F + GGD + + + L++ +++A++ED+K D D DG+ DV+Q+ +L +RK AL LR I+P + A+ G+W GY+ VL LK R+A+ LA SIG+ +RP +K+ GPS+ V P +Y W+ P N CK + +TIAW +Q +STVQS + GGL SR+ L + + DDT DE+ GW LAA G Y+Q LP + +LWPA +LE
Sbjct: 132 EAFKLAGGDSMMMHLVTLRDSAVKVQQASQEDDKHDADGDGVADVRQMGARQLFSRKMALVLRSIDPGVVSEAVGGLWSGYLGVLAALKLRYARTAALAHSIGDAVRPAASKLFGPSVLAVTPPDYRNWVGPAFNLACKVLGLTIAWRLQHAISTVQSGLTGGLQASRAALALMGRAS------DDTMADEVAGWALAATGIYYQFLGG-GLPAVLVPVLWPAGLLE 351
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A7S2D5F5_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5F5_9STRA) HSP 1 Score: 177 bits (448), Expect = 5.330e-52 Identity = 79/204 (38.73%), Postives = 130/204 (63.73%), Query Frame = 1
Query: 94 DNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLKLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVDLLLWPAYVLEAFLEWSVT 705
D+++DDD DGI DV Q+S + LLTRK+ L LR ++P++ + AL G+ + +V +LK FA+ I+L VSI + ++ +++ P L V+P EYH+WI I+YLCK+V +++AW +Q +S S+ GGL+F+R++L F + + +DT IDE GW LAA G + Q+ ++L + + +LWP E +++W +T
Sbjct: 1 DDQKDDDGDGIKDVNQVSGQALLTRKSLLVLRTVDPEKISKALAGVAVSWTAVAAVLKVEFARTISLGVSIADRLKAPTGRVMIPVLTHVLPPEYHRWIPVTIDYLCKYVGVSVAWKLQSAISAFHSSFRGGLMFTRAVLTFAGEKGLTNVRHEDTMIDEFTGWPLAAAGFWCQLKGGFELHFPFNFVLWPLEAAEKWIQWQIT 204
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Match: A0A7S1AZY3_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZY3_NOCSC) HSP 1 Score: 179 bits (455), Expect = 3.170e-51 Identity = 91/217 (41.94%), Postives = 131/217 (60.37%), Query Frame = 1
Query: 1 QTFNMTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLTRKTALALRVINPDRATNALTGIWQGYMSVLVILKFRFAKVITLAVSIGNNMRPTVAKILGPSLAFVVPKEYHQWIAPMINYLCKFVAMTIAWWIQRFVSTVQSAIEGGLLFSRSLLRFISDTTSLKLDPDDTFIDEIVGWTLAACGAYFQISHNWDLPWFVD 651
+ F TG + + L ++L + +K+D+ D D DGI DV QI+ +L+TRKT L +R + D+ AL ++ G++SV LK +FA+ I+L VSIGN RP +L P L +VPKEYH WI P+I+Y+CK VA+++AWWIQR +S SAI G L+ +R+LLR ++ D T +DE GW LAA G Q+ + LP+ VD
Sbjct: 148 EAFTQTGWKESQEAIGFLWDELHIIAEESKKDDDVDADGDGIKDVNQITGSELITRKTLLVMRKTHADKINRALGSLYVGFLSVAATLKVQFARTISLGVSIGNVARPVAETVLVPPLTHLVPKEYHHWIRPVIDYICKAVAVSVAWWIQRILSAYHSAIRGALMCTRALLRIANEKNWYSTTEDKTMLDEYAGWVLAAFGFMCQMYFGFALPFPVD 364 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17903.4735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17903.4735.1 >prot_H-elongata_contig17903.4735.1 ID=prot_H-elongata_contig17903.4735.1|Name=mRNA_H-elongata_contig17903.4735.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bp MTGGDKIWLCVRELKEDLEALRRANKEDNKRDDDNDGIPDVQQISPEKLLback to top mRNA from alignment at H-elongata_contig17903:2566..7246- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17903.4735.1 ID=mRNA_H-elongata_contig17903.4735.1|Name=mRNA_H-elongata_contig17903.4735.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4681bp|location=Sequence derived from alignment at H-elongata_contig17903:2566..7246- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17903:2566..7246- >mRNA_H-elongata_contig17903.4735.1 ID=mRNA_H-elongata_contig17903.4735.1|Name=mRNA_H-elongata_contig17903.4735.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at H-elongata_contig17903:2566..7246- (Himanthalia elongata Himel1 dioecious)back to top |