prot_H-elongata_contig178059.4692.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE) HSP 1 Score: 157 bits (396), Expect = 1.110e-41 Identity = 83/176 (47.16%), Postives = 116/176 (65.91%), Query Frame = 0
Query: 1 YVDDILFFSASKTFLNKLKKKLMDRFEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLN-QPEEKLLNEEEKRRYQVITR---------------AQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRMEA 160
YVDD+L ++ +K KL RF+M+++G+ S +LG+ + RDRE T+TISQ+ Y +++++R+GM P TPG G E+S N QPE+ LL+E+E R+YQ I A GGF+LA FS++NW NNPDN +STSSY+ MLANAP+SF+ GL+GLT MEA
Sbjct: 504 YVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNNIQPEDTLLDEKETRKYQGIMGSLMYIALVLRYDIMCATGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEA 679
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE) HSP 1 Score: 149 bits (377), Expect = 7.140e-40 Identity = 80/185 (43.24%), Postives = 114/185 (61.62%), Query Frame = 0
Query: 1 YVDDILFFSASKTFLNKLKKKLMDRFEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQV-------------------------ITRAQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRMEA 160
YVDD++ + + +K KLM++F+MS +G+VS +LG+ VTRD E GT+TI+Q DYT +++ R+GM+ P P VG ELS QP E +LN+E+ + IT +GGF+L AFS+ANW +NPDN+RSTSSY++M++ AP+SFK GL+ LT MEA
Sbjct: 241 YVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEKTQSQLARVMSKAAKAHMGAAKHLLRGTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEA 425
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.280e-38 Identity = 82/212 (38.68%), Postives = 116/212 (54.72%), Query Frame = 0
Query: 1 YVDDILFFSASKTFLNKLKKKLMDRFEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQ----------------------------------------------------VITRAQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRMEA 160
YVDD+L ++ +K KL RF+M+++G+ S +LG+ + RDRE T+TISQ+ Y +++++R+GM P TPG G E+S QPE+ LL+E+E R+YQ IT +GGF+LA FS++NW NNPDN +STSSY+ MLANAP+SF+ GL+GLT MEA
Sbjct: 118 YVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEA 329
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 142 bits (358), Expect = 2.910e-36 Identity = 81/212 (38.21%), Postives = 115/212 (54.25%), Query Frame = 0
Query: 1 YVDDILFFSASKTFLNKLKKKLMDRFEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQ----------------------------------------------------VITRAQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRMEA 160
YVDD+L ++ +K KL RF+M+++G+ S +L + + RDRE T+TISQ+ Y +++++R+GM P TPG G E+S QPE+ LL+E+E R+YQ IT +GGF+LA FS++NW NNPDN +STSSY+ MLANAP+SF+ GL+GLT MEA
Sbjct: 678 YVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEA 889
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 142 bits (358), Expect = 3.030e-36 Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 0
Query: 1 YVDDILFFSASKTFLNKLKKKLMDRFEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQ----------------------------------------------------VITRAQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRMEA 160
YVDD+L ++ +K KL RF+M+++G+ S +LG+ + RDRE T+TISQ+ Y +++++R+G+ P TPG G E+S QPE+ LL+E+E R+YQ IT +GGF+LA FS++NW NNPDN +STSSY+ +LANAP+SF+ GL+GLT MEA
Sbjct: 1347 YVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEA 1558
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE) HSP 1 Score: 135 bits (340), Expect = 7.790e-34 Identity = 69/146 (47.26%), Postives = 98/146 (67.12%), Query Frame = 0
Query: 26 FEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQ-----------VITRAQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRMEA 160
F+M+NMG+V +LG+++ +D +GT+TISQ+ Y++++++R+GM P TPG G ELS QPE+ LL+EEE RRYQ V+ G +LA FS +NW NNPDN +S+S Y+ ML NAP+SFK G++G T MEA
Sbjct: 914 FKMTNMGEVKLVLGMDIKKDCNRGTLTISQEAYSKSILERFGMSECKPISTPGYGSELSNKQPEDTLLDEEETRRYQGIVGCLMYIAQVLRYDVIGSKLATFSESNWANNPDNGKSSSCYLTMLGNAPVSFKSGIQGPTAMSTMEA 1059
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5KPN4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN4_9PHAE) HSP 1 Score: 125 bits (315), Expect = 2.630e-31 Identity = 72/187 (38.50%), Postives = 96/187 (51.34%), Query Frame = 0
Query: 26 FEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQVI----------------------------------------------------TRAQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRMEA 160
F+M++MG+V +LG+ + RD +GT+TISQK YT+++++R+GM P TPG G ELS QPE+ LL EEE RRYQ I T GF+LA FS++NW NNPDN +STS Y+ ML N P+S K G++G T MEA
Sbjct: 234 FKMTDMGEVKLVLGMEIKRDHNQGTLTISQKAYTKSILERFGMSECKPTSTPGYGSELSNKQPEDTLLGEEETRRYQGIVGCLMYIAQVLRYDIMYATGQLARPMEKPSKIHMVAAKHTLRYVAGTTNFRITYKSEGFKLATFSDSNWANNPDNGKSTSCYLTMLGNTPVSLKSGIQGPTAMSTMEA 420
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.360e-30 Identity = 70/190 (36.84%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 1 YVDDILFFSASKTFLNKLKKKLMDRFEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQ----------------------------------------------VITRAQGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPIS 144
YVDD+L ++ +K KL RF+M+++G+ S +LG+ + RDRE T+TISQ+ Y +++++R+GM P TPG G E+S QP+ LL+E+E R+YQ IT +GGF+LA FS++NW NNPDN +ST+SY+ ML NAP+S
Sbjct: 1512 YVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPDYTLLDEKETRKYQGIVGSPMYIAHXDQYTWLARPMAKPSKVHMVAAKHTLRFLVGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTASYLTMLVNAPMS 1701
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5KCG4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG4_9PHAE) HSP 1 Score: 115 bits (287), Expect = 9.980e-29 Identity = 54/105 (51.43%), Postives = 76/105 (72.38%), Query Frame = 0
Query: 1 YVDDILFFSASKTFLNKLKKKLMDRFEMSNMGDVSKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQVIT 105
YVDDIL +K +++ KK+LMD FEM++MG+V +++GI V RD E GT+ ISQ Y +++QRYGM+ NP TPG G ELS QP+++LL E+K+R+Q IT
Sbjct: 105 YVDDILITEGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAIT 209
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE) HSP 1 Score: 115 bits (288), Expect = 7.200e-27 Identity = 66/177 (37.29%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 35 SKLLGINVTRDREKGTITISQKDYTENVVQRYGMKSFNPAYTPGVGPELSLNQPEEKLLNEEEKRRYQVITRA----------------------------------------------------QGGFRLAAFSNANWGNNPDNSRSTSSYIVMLANAPISFKVGLKGLTEQFRME 159
S + G+ + RDRE+GT++IS++ Y+++++ R+GM + P TPG+GP S QPEE LLN+EE RRYQ I +GGF+L AF+++NWGNNPDN +STSS++ ML +AP++FK GL+ LT Q ME
Sbjct: 435 SLISGMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTME 611 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig178059.4692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig178059.4692.1 ID=prot_H-elongata_contig178059.4692.1|Name=mRNA_H-elongata_contig178059.4692.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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