mRNA_H-elongata_contig177904.4685.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A126WYE1_SCYLO (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126WYE1_SCYLO) HSP 1 Score: 295 bits (754), Expect = 4.690e-93 Identity = 144/151 (95.36%), Postives = 147/151 (97.35%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
P DADEWLNMFVSTAE+FPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFD D+IYRYVIGVQFEI +D GLKKRLVQLDKLLRLLPSRLNLKS
Sbjct: 206 PGDADEWLNMFVSTAEFFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDGDNIYRYVIGVQFEILEDKGLKKRLVQLDKLLRLLPSRLNLKS 356
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: D7FQX8_ECTSI (Helmchrome putative blue light receptor for phototaxis n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQX8_ECTSI) HSP 1 Score: 299 bits (766), Expect = 1.960e-91 Identity = 147/151 (97.35%), Postives = 148/151 (98.01%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
P DADEWLNMFVSTAE+FPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEI QD GLKKRLVQLDKLLRLLPSRLNLKS
Sbjct: 159 PGDADEWLNMFVSTAEFFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEILQDEGLKKRLVQLDKLLRLLPSRLNLKS 309
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A126X2E1_9PHAE (Putative LOV domain-containing protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A126X2E1_9PHAE) HSP 1 Score: 290 bits (741), Expect = 1.170e-88 Identity = 141/151 (93.38%), Postives = 146/151 (96.69%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
P DAD+WLNMF+S+AE FPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFD D+IYRYVIGVQFEI +D GLKKRLVQLDKLLRLLPSRLNLKS
Sbjct: 623 PQDADDWLNMFISSAESFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDGDNIYRYVIGVQFEILEDKGLKKRLVQLDKLLRLLPSRLNLKS 773
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A482RNG8_9ARCH (PAS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNG8_9ARCH) HSP 1 Score: 265 bits (678), Expect = 2.800e-88 Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
P DAD+WLN+FVSTAE PACIVISDMTIPGAPMVY+N EF KTTGY KEEA+GRNCRFLQGP+TEPE+I VIRNTLSKGQDCHVKLTNYRKNGE FQNLLSMKPVFDAD IYRYVIGVQFEI +D LK+RL+QLDKLLRLLPS+LNL+S
Sbjct: 10 PQDADDWLNIFVSTAESLPACIVISDMTIPGAPMVYVNQEFCKTTGYGKEEAIGRNCRFLQGPDTEPEAIQVIRNTLSKGQDCHVKLTNYRKNGEMFQNLLSMKPVFDADGIYRYVIGVQFEIKEDDKLKERLIQLDKLLRLLPSKLNLRS 160
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A7S1UBY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBY0_9STRA) HSP 1 Score: 270 bits (691), Expect = 7.410e-84 Identity = 128/151 (84.77%), Postives = 142/151 (94.04%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
P DAD+WLNMFVS+AE FPACIVISDMTIPGAPMVY+NGEF++TTGYTKEE+VGRNCRFLQGP+TEPESI VIRNTLSKGQDCHV LTNYRKNGEKF+NLLSM+PVFDAD+IYRYVIGVQFE+ QD LKKRLVQLDKLL+LLP ++ LKS
Sbjct: 203 PQDADDWLNMFVSSAESFPACIVISDMTIPGAPMVYVNGEFSRTTGYTKEESVGRNCRFLQGPDTEPESIQVIRNTLSKGQDCHVLLTNYRKNGEKFRNLLSMRPVFDADNIYRYVIGVQFEVVQDKNLKKRLVQLDKLLKLLPRKIGLKS 353
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A835YT73_9STRA (PAS/PAC sensor hybrid histidine kinase putative blue light receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT73_9STRA) HSP 1 Score: 277 bits (709), Expect = 1.130e-83 Identity = 137/149 (91.95%), Postives = 140/149 (93.96%), Query Frame = 1
Query: 7 DADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
DAD+WLNMFVSTAE FPACIVISDMTIPGAPMVYIN EFTK TGYTKEEAVGRNCRFLQGP+TEPESIAVIRNTLSKGQDCHVKLTNYRKNG+KFQNLLSMKPVFD D IYRYVIGVQFEI D GLKKRLVQLDKLLRLLPSRL LKS
Sbjct: 946 DADDWLNMFVSTAESFPACIVISDMTIPGAPMVYINSEFTKVTGYTKEEAVGRNCRFLQGPDTEPESIAVIRNTLSKGQDCHVKLTNYRKNGDKFQNLLSMKPVFDGDGIYRYVIGVQFEIIADQGLKKRLVQLDKLLRLLPSRLPLKS 1094
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A7S1UEB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEB3_9STRA) HSP 1 Score: 270 bits (691), Expect = 8.310e-82 Identity = 128/151 (84.77%), Postives = 142/151 (94.04%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
P DAD+WLNMFVS+AE FPACIVISDMTIPGAPMVY+NGEF++TTGYTKEE+VGRNCRFLQGP+TEPESI VIRNTLSKGQDCHV LTNYRKNGEKF+NLLSM+PVFDAD+IYRYVIGVQFE+ QD LKKRLVQLDKLL+LLP ++ LKS
Sbjct: 542 PQDADDWLNMFVSSAESFPACIVISDMTIPGAPMVYVNGEFSRTTGYTKEESVGRNCRFLQGPDTEPESIQVIRNTLSKGQDCHVLLTNYRKNGEKFRNLLSMRPVFDADNIYRYVIGVQFEVVQDKNLKKRLVQLDKLLKLLPRKIGLKS 692
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A835YJF7_9STRA (PAS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJF7_9STRA) HSP 1 Score: 241 bits (615), Expect = 7.130e-74 Identity = 111/150 (74.00%), Postives = 133/150 (88.67%), Query Frame = 1
Query: 4 SDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
+DAD+WL F++TA+ FPACIV+SDMT PGAPM+++N F K TGY+KEE VGRNCRFLQGP+TEPE+IA+IR+TLS+GQDCHVKLTNYRKNGEKFQNLLSMKPVFDA+ IYRYVIGVQFE+ D GLK+RL QLDKLL ++PS+L K+
Sbjct: 235 TDADDWLKAFIATADSFPACIVVSDMTQPGAPMIFVNDAFCKVTGYSKEETVGRNCRFLQGPDTEPEAIALIRSTLSQGQDCHVKLTNYRKNGEKFQNLLSMKPVFDANGIYRYVIGVQFEVVADKGLKRRLSQLDKLLTMMPSKLQTKA 384
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: A0A7S4IDC3_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IDC3_9EUKA) HSP 1 Score: 211 bits (536), Expect = 1.280e-66 Identity = 95/151 (62.91%), Postives = 123/151 (81.46%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEITQDVGLKKRLVQLDKLLRLLPSRLNLKS 453
P D W++ FV+ AE +PACIVISDM +PG PM ++N EF KTTGY K E GRNCRFLQGP+TEP+S+AVI++TL +G DCHVKLTNYRKNG+ F+NLL+M+PV D++ +YR+ IGVQFE+T+D+ LK RL +LDKL++LLPS L + S
Sbjct: 12 PEDCAGWIHSFVAVAETYPACIVISDMQVPGNPMFFVNQEFCKTTGYPKHEVQGRNCRFLQGPKTEPQSVAVIQDTLRRGVDCHVKLTNYRKNGDLFENLLTMRPVHDSNGVYRFCIGVQFEVTRDLSLKSRLAKLDKLVKLLPSTLEVSS 162
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Match: F0YGV8_AURAN (PAS domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGV8_AURAN) HSP 1 Score: 206 bits (524), Expect = 3.030e-66 Identity = 91/123 (73.98%), Postives = 109/123 (88.62%), Query Frame = 1
Query: 1 PSDADEWLNMFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFLQGPETEPESIAVIRNTLSKGQDCHVKLTNYRKNGEKFQNLLSMKPVFDADDIYRYVIGVQFEI 369
P DADEWL+ F++ AE +PACIV+SDMTIPGAPMVY+N EF + T Y +EEAVGRNCRFLQGP+TEPESI VI+ TL KG+DCHV LTNYRK+G+KF+NLLSM+PV+DADD+YRY IGVQFE+
Sbjct: 3 PQDADEWLSSFITFAETWPACIVVSDMTIPGAPMVYVNPEFCRVTEYPREEAVGRNCRFLQGPDTEPESIQVIQETLCKGEDCHVLLTNYRKSGDKFKNLLSMRPVYDADDVYRYTIGVQFEV 125 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig177904.4685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig177904.4685.1 >prot_H-elongata_contig177904.4685.1 ID=prot_H-elongata_contig177904.4685.1|Name=mRNA_H-elongata_contig177904.4685.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp MFVSTAEYFPACIVISDMTIPGAPMVYINGEFTKTTGYTKEEAVGRNCRFback to top mRNA from alignment at H-elongata_contig177904:214..666- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig177904.4685.1 ID=mRNA_H-elongata_contig177904.4685.1|Name=mRNA_H-elongata_contig177904.4685.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=453bp|location=Sequence derived from alignment at H-elongata_contig177904:214..666- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig177904:214..666- >mRNA_H-elongata_contig177904.4685.1 ID=mRNA_H-elongata_contig177904.4685.1|Name=mRNA_H-elongata_contig177904.4685.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig177904:214..666- (Himanthalia elongata Himel1 dioecious)back to top |