mRNA_H-elongata_contig177745.4679.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: D8LIQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIQ9_ECTSI) HSP 1 Score: 155 bits (391), Expect = 5.230e-46 Identity = 79/109 (72.48%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QTKQYFREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKHAAGDSQTIKEDEMEMNMKRRRMKEEYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEGE 327
+TKQYFREYMEDFNT TLPH+KYI+LEKWEMAEFHRKKA +AK+ A+GD+ +++EDEMEMN+K+RR +E N K+D+LVK SITG+KRE MQSQDLLRA+MQ AYK G+
Sbjct: 48 ETKQYFREYMEDFNTCTLPHDKYIDLEKWEMAEFHRKKASEAKRRASGDALSMREDEMEMNLKKRRAREAANAKFDNLVKASITGSKRENMQSQDLLRAKMQNAYKHGD 156
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: A0A835ZAA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA4_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.150e-14 Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 1
Query: 1 QTKQYFREYMEDFNTATLPHEKYINLEKWEMAEFH-------------------------------RKKARDAKKHAAGDSQTIKEDEMEMNMKRRRMKE-EYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEGE 327
+ K++FREYMED+NTATLPHEKYIN KWEM E+ +KK ++AK+ AG T DE + ++R+R K+ +++D+++ ++ K + M+SQ+LLRA+MQQAY++G+
Sbjct: 269 EVKEFFREYMEDYNTATLPHEKYINYAKWEMEEWESEWSSLAXXXXXXXXXXXXXXXXXXXPGLAAQKKRKEAKRLKAGAPVTA-GDEAAVALERKREKQLREQQEFDNMIMATMRSNKVQEMRSQELLRAEMQQAYRQGD 408
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: A0A7S1U4G1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4G1_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 9.080e-14 Identity = 43/109 (39.45%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 1 QTKQYFREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKHAAGDSQTIKEDEMEMNMKRRRMKEEYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEGE 327
+T + F E+ EDFNT TLPHEKY +LE WEMAE+ +++A A+ + S ++E+E + RR +E + Y+ +V++ + K + M+ Q LLRA+ Q A+K G+
Sbjct: 85 ETMELFAEFAEDFNTVTLPHEKYYDLEAWEMAEYRKREAAAAEARSGATSLQLEEEEAMRS--RREAEERKQRSYNDMVRQMLNKDKVDEMRHQQLLRAEAQIAFKSGD 191
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: T0RK20_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RK20_SAPDV) HSP 1 Score: 74.3 bits (181), Expect = 1.860e-13 Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 13 YFREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKHAAGDSQTIKEDEMEMNMKRRRMKEEYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEG 324
+FR+YMED+NTATLPHEKY ++EK+E +F +++A+ AK+H + KE+E +R R + + NKK +L+ +++ +K E M+ Q LR QMQ YK G
Sbjct: 192 HFRDYMEDYNTATLPHEKYYDVEKYEQRKFAKEQAKRAKRHKP----SAKEEEETAYAERMRQRADANKKEFALIMQTMDRSKIEHMREQQRLRDQMQMHYKAG 291
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: A0A8K1FMQ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMQ5_PYTOL) HSP 1 Score: 71.2 bits (173), Expect = 1.430e-12 Identity = 45/109 (41.28%), Postives = 71/109 (65.14%), Query Frame = 1
Query: 10 QYFREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKH--AAGDSQTIKEDEMEMNMKRRRMKEEYNKKYDS--LVKKSITGTKRETMQSQDLLRAQMQQAYKEG 324
+YF+EYMED+NTAT+PHEKY ++EK+EM ++ + + + A+KH AAG S+ E E ++R R + K+ + L+ +++ K E M+ Q+ LRA+MQ YK G
Sbjct: 135 EYFKEYMEDYNTATMPHEKYYDIEKYEMGKYEKDQKKKARKHLEAAGSSRGGSEVPDEDAVRRERQAQRAAKEQEEFRLIMQTMDKDKIEAMRRQEQLRAEMQMHYKAG 243
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: A0A067BIG6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BIG6_SAPPC) HSP 1 Score: 69.7 bits (169), Expect = 4.120e-12 Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 13 YFREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKHAAGDSQTIKEDEMEMNMKRRRMKEEYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEG 324
+FR+YMED+NTATLPH KY ++EK+E + +++A+ AK+H + E+E +R R + E NKK +L+ +++ +K E+M+ Q LR QMQ YK G
Sbjct: 107 HFRDYMEDYNTATLPHAKYYDIEKYEQRKLAKEQAKRAKRHKPRPA----EEEATAYAERMRQRAEANKKEFALILQTMDRSKIESMREQQRLRDQMQMHYKAG 206
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: A0A024TMH4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMH4_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.890e-12 Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 16 FREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKHAAGDSQTIKEDEMEMNMKRRRMKEEYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEG 324
F+EYMED+NTATLPHEKY ++EK+EM + HRKK K G + +DE M +R R + E K SL+ ++++ K E M+ Q+ LR QMQ YK G
Sbjct: 132 FKEYMEDYNTATLPHEKYYDVEKYEMRQ-HRKKEGKRK----GGATNAHDDEEAMRRERLRQRVEEENKDFSLIMQTMSKEKIENMRYQEKLRTQMQLHYKSG 229
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: A0A484EF14_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF14_BRELC) HSP 1 Score: 70.1 bits (170), Expect = 7.260e-12 Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 1
Query: 16 FREYMEDFNTATLPHEKYINLEKWEMAEFHRKKAR-DAKKHAAGD-SQTIKEDEMEMNMKRRRMKEEYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEG 324
F+EYMEDFNT TLPHEKY ++EK+EM ++ +++ + AK +A D + I+ DE + +R+ ++E+ K+ LV + + K E M+ Q+ LRAQMQ YK G
Sbjct: 218 FKEYMEDFNTCTLPHEKYYDIEKYEMLQYQKQQRKAHAKLESASDMAMDIQADEDRVRRERQALREKKEKEEFRLVLQLMDKEKIEAMREQERLRAQMQMFYKSG 322
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: W4FFX2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFX2_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 7.690e-12 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 16 FREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAK-KH--AAGDSQTIKEDEMEMNMKRRRMKEEYNKKYDSLVKKSITGTKRETMQSQDLLRAQMQQAYKEG 324
F+EYMED+NTAT PHEKY ++EK+EM + H+K ++D K KH A GD + M +R R + E +K L+ ++++ K E M++Q+ LR QMQ YK G
Sbjct: 140 FKEYMEDYNTATFPHEKYYDVEKYEMRKHHKKASKDNKRKHDDAPGDEEA-------MRRERLRQRIEAGQKDFGLIMQTMSKEKIEGMRNQEKLRTQMQLHYKSG 238
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Match: B8CDB5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDB5_THAPS) HSP 1 Score: 70.1 bits (170), Expect = 7.840e-12 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 10 QYFREYMEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKHAAGDSQT----IKEDEMEMNMKRRRMKEEYNKKYDSL--VKKSITGTKRETMQSQDLLRAQMQQAYKEGE 327
+YF+EY EDFNT T+PHEKY N +KWEM E+ RKK R+A A+G ++T I DE + + + ++ KK + L V++S+T KRE M++Q L+ ++ AYK G+
Sbjct: 241 EYFKEYAEDFNTGTMPHEKYYNYDKWEMEEYERKK-REAAAKASGGTETNNTSIALDEFQHREQMAQRAKQ--KKLEELKRVQQSMTAEKREEMKNQARLKHELAVAYKTGD 349 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig177745.4679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig177745.4679.1 >prot_H-elongata_contig177745.4679.1 ID=prot_H-elongata_contig177745.4679.1|Name=mRNA_H-elongata_contig177745.4679.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp MEDFNTATLPHEKYINLEKWEMAEFHRKKARDAKKHAAGDSQTIKEDEMEback to top mRNA from alignment at H-elongata_contig177745:376..1204+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig177745.4679.1 ID=mRNA_H-elongata_contig177745.4679.1|Name=mRNA_H-elongata_contig177745.4679.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=829bp|location=Sequence derived from alignment at H-elongata_contig177745:376..1204+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig177745:376..1204+ >mRNA_H-elongata_contig177745.4679.1 ID=mRNA_H-elongata_contig177745.4679.1|Name=mRNA_H-elongata_contig177745.4679.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=606bp|location=Sequence derived from alignment at H-elongata_contig177745:376..1204+ (Himanthalia elongata Himel1 dioecious)back to top |