prot_H-elongata_contig17698.4641.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17698.4641.1 vs. uniprot
Match: D8LRR0_ECTSI (Small nuclear ribonucleoprotein G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR0_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 2.400e-17 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 0
Query: 1 MNLVLDDATDPASSDKRMGMVIIRGNSVVQFEILDPLRF 39
MNLVLD+ TDPASSDK+MGMVIIRGNSVVQFEILDPLRF
Sbjct: 37 MNLVLDETTDPASSDKKMGMVIIRGNSVVQFEILDPLRF 75
BLAST of mRNA_H-elongata_contig17698.4641.1 vs. uniprot
Match: A0A835YWI2_9STRA (Small nuclear ribonucleoprotein G n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI2_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 8.320e-7 Identity = 22/40 (55.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query: 1 MNLVLDDATD-PASSDKRM-GMVIIRGNSVVQFEILDPLR 38
MN+VLD+A + P+ +++R+ GMV+IRGNSV++FE+LDP++
Sbjct: 38 MNIVLDEAVEVPSKAEERLIGMVVIRGNSVIRFEVLDPVQ 77
BLAST of mRNA_H-elongata_contig17698.4641.1 vs. uniprot
Match: A0A4D9CNZ1_9STRA (Small nuclear ribonucleoprotein G n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNZ1_9STRA) HSP 1 Score: 46.2 bits (108), Expect = 1.810e-5 Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
Query: 1 MNLVLDDATDPASSDKR-MGMVIIRGNSVVQFEILDPL 37
MN+VLD+ D + DK +G+V+IRGNSVVQFE L+ L
Sbjct: 38 MNIVLDETVDDGAPDKNDIGLVVIRGNSVVQFECLEKL 75
BLAST of mRNA_H-elongata_contig17698.4641.1 vs. uniprot
Match: W7TL56_9STRA (Small nuclear ribonucleoprotein G n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL56_9STRA) HSP 1 Score: 46.2 bits (108), Expect = 2.400e-5 Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
Query: 1 MNLVLDDATDPASSDKR-MGMVIIRGNSVVQFEILDPL 37
MN+VLD+ D + DK +G+V+IRGNSVVQFE L+ L
Sbjct: 51 MNIVLDETVDDGAPDKNDIGLVVIRGNSVVQFECLEKL 88
BLAST of mRNA_H-elongata_contig17698.4641.1 vs. uniprot
Match: A4S6B0_OSTLU (Small nuclear ribonucleoprotein G n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S6B0_OSTLU) HSP 1 Score: 44.3 bits (103), Expect = 9.760e-5 Identity = 20/38 (52.63%), Postives = 30/38 (78.95%), Query Frame = 0
Query: 1 MNLVLDDATDPASSDKR-MGMVIIRGNSVVQFEILDPL 37
+N+VLDDAT+ +S+K MGM+++RGNSVV E L+ +
Sbjct: 26 LNVVLDDATNDTTSEKTPMGMIVVRGNSVVSMEALEHI 63 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17698.4641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig17698.4641.1 ID=prot_H-elongata_contig17698.4641.1|Name=mRNA_H-elongata_contig17698.4641.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bpback to top |