prot_H-elongata_contig176330.4610.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig176330.4610.1
Unique Nameprot_H-elongata_contig176330.4610.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length297
Homology
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: V5GT76_ANOGL (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GT76_ANOGL)

HSP 1 Score: 213 bits (541), Expect = 2.070e-63
Identity = 122/292 (41.78%), Postives = 175/292 (59.93%), Query Frame = 0
Query:    3 IDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGEEQRE-----YRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKA--DGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTR 287
            I +D V++ + + Q+ Y  ++L +F MD++NP  T       ++                KE LP+  E +R+     Y+E VGSLLF ++ +RPDI + +  +SR  Q+P   H +A KR+ +YL+GT  Y + + RK   D   + G+ DAD+G+D   RRSVTGY+F     PISW++K Q  VA+ST ESEY+A+  A +EAI+LR L   L      PT L  DNQGA  LA N G + ARTKHIDIRHH +++ I NG++SI  VST+  +AD LTK L++V F +
Sbjct:   64 ITRDRVNKKIWIDQKDYLEKVLRKFNMDQSNPVDTPMSAGEKLI----------------KEQLPIGDERKRKMENIPYQEAVGSLLFASQISRPDICYAISCVSRFNQNPGPAHWSAVKRIFRYLKGTIHYRLEFSRKTEIDNSDIIGYCDADWGSDPNDRRSVTGYIFLKNGSPISWNTKKQPTVALSTTESEYMAMSSAVQEAIWLRGLSYELSA-NTKPTLLYVDNQGAQKLALN-GTYQARTKHIDIRHHFLKEKIDNGIISIKYVSTSYMLADSLTKPLDKVKFLK 337          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A0J7N0A8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7N0A8_LASNI)

HSP 1 Score: 208 bits (529), Expect = 1.360e-62
Identity = 118/282 (41.84%), Postives = 171/282 (60.64%), Query Frame = 0
Query:   12 LTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGEEQRE-----YRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRR-KADGL-CLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVG-PTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTF 285
            + L Q+ Y  +I+ ++GM+   P  T  D  N + R                + +P   EE++E     YRE VG LL++++ TRPD+A+ V  +SR MQ+  R H  A KR+L+YLRGT DY +++ + +A G   + G+ DAD+ N+  TRRSVTG +F    GPI+W SK+QS VA+ST E+EY+AL    +EA++LR L+  L+   V  PTEL  DN+GAIDL  N G + +RTKHIDIRHH +R++  N  + +  + T + +AD LTKGL    F
Sbjct:    2 ICLDQKSYIQKIIKKYGMEDCKPTSTPYDPSNKLSR----------------DMMPKNEEEEKEMKNVPYREAVGGLLYISQGTRPDVAYAVSTVSRYMQNLGRNHWTAVKRILRYLRGTLDYRLQFGKDQAKGHENITGYCDADWANESDTRRSVTGNIFLFQGGPITWQSKLQSTVALSTTEAEYMALSAGCQEAMWLRALVRDLQPLLVSSPTELYNDNKGAIDLVKNGG-YRSRTKHIDIRHHFIREMNENSEIVVNYLPTTEMIADALTKGLYASKF 266          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A0C3AUA9_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AUA9_9AGAM)

HSP 1 Score: 209 bits (531), Expect = 1.400e-62
Identity = 121/297 (40.74%), Postives = 176/297 (59.26%), Query Frame = 0
Query:    1 MHIDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGEEQRE-----YRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRLREQI 292
            M I +D  ++T++LSQ  Y   ++ RFG+D A PA T   F   V  ++              +  P   +E RE     YRELVGSL++L   TRPDI++ V +LS+ + +P R H  AAKRVL++L+G+ D+ +     +D   L  + DAD+  D   R+S  GYVF +  G +SWSSK Q  VA+S++E+EY+AL +AAKEAI+++  L  + V   GP  +  DNQG++ LA N  VF ARTKHIDI+HH +RD + +G + +  +ST D +AD LTK L R    R   ++
Sbjct:   24 MRITRDRSAKTISLSQSAYIDSLVTRFGLDNATPAAT--PFVQGVALTR--------------DQCPANDDEVREMANVPYRELVGSLMYLRVATRPDISYHVSVLSKFLNNPGRAHWEAAKRVLRFLKGSRDWKLTLGGFSD---LVAYSDADWAGDHDDRKSTGGYVFLVGRGAVSWSSKRQPTVALSSLEAEYMALTQAAKEAIWIKSYLADIDVHVHGPVTVFGDNQGSLALAKNP-VFHARTKHIDIQHHFIRDCVASGTIFVDYISTHDMLADGLTKPLSRDKHLRFAYEL 300          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A6H5IY10_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IY10_9HYME)

HSP 1 Score: 209 bits (532), Expect = 6.570e-62
Identity = 122/290 (42.07%), Postives = 163/290 (56.21%), Query Frame = 0
Query:    1 MHIDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGEEQREY--RELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRL 288
            + I++D     + L Q +YA +IL RF M  ANP  T   F+     +                  P E      Y  RE +GSL+FL   TRPD++F V  LSR ++   R H  A KRV++Y++GT ++ I Y+R   G  L GF D+D+  D  TRRS TGY+F LASGPI+WS++ QS VA+S+ E+EY+A   A KE I+LR L+  L      PT L  DN  AI L  N  VF  +TKHI+++HH VR+   +GVV I  V +  Q+ADILTK L RV    L
Sbjct:   32 IQIERDRERGQMHLCQSQYAIKILKRFNMFDANPVST--PFEKGTCLTS-----------------PTESPSSTNYPYREAIGSLMFLTNVTRPDLSFSVNYLSRFLEKHARNHCEALKRVMRYIKGTINHGIVYKRSNGGDKLLGFSDSDFAGDADTRRSTTGYIFMLASGPITWSTQRQSSVALSSTEAEYVAAAAATKEIIWLRKLMQDLGFHDAKPTTLHVDNMSAIQLIRNP-VFHKKTKHIEVKHHFVREKFQSGVVEIQHVPSESQLADILTKALPRVQHQNL 301          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A146HFR8_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HFR8_MYCCL)

HSP 1 Score: 207 bits (527), Expect = 5.930e-61
Identity = 121/294 (41.16%), Postives = 164/294 (55.78%), Query Frame = 0
Query:    1 MHIDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGEEQREYRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRLREQILG 294
            M I Q+P   ++ LSQ  YA  +L   GM++AN   T  D  N  +   +      G T             +  Y   +G L++LA  TRPD+AF V  LS+    P   HM+A KRV +YLRGTT   I +R   D   LH F DAD+GND   RRS++GY+ FL + P+SW+S+ Q  VA+ST+E+EY+A      E I+LR L   L +    PT +  DNQ AI  A N  +F AR+KHID+RHH VR+ + +  V +   ++ D +ADILTK L R  F  LR+Q LG
Sbjct:  100 MEISQNPTDGSIRLSQANYASRVLESVGMEKANAVQTPLD-PNVKLTPLAKGDPRIGDTAF-----------RHGYLSGIGKLMYLAVATRPDLAFAVQHLSQFSIRPGPEHMSALKRVFRYLRGTTSLGIAFRGSGD---LHIFSDADWGNDNTDRRSISGYLSFLGASPLSWASRKQPTVALSTMEAEYMAAARTTCEIIWLRQLASELGISVEAPTPIHIDNQSAIKFAENP-MFHARSKHIDMRHHFVRERVASNEVKLVHCASEDNLADILTKPLPRPQFVALRDQFLG 377          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A1X7SF09_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SF09_AMPQE)

HSP 1 Score: 202 bits (514), Expect = 9.010e-61
Identity = 103/218 (47.25%), Postives = 149/218 (68.35%), Query Frame = 0
Query:   75 EYRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRLREQI 292
            EY+ +VGSLL++A  TRPDIA  V ++S+    P++ H++AAKR+L+YL+GT+D  +++++   G  L G+ DAD+  +   R S TG +F LA GPISW SK QS+VA+ST E+EY+AL   A+EAI+LR LL+SL     GPT + EDNQGAI +A N  +   RTKHIDI +H +R+ I + V+ +    + D +AD+LTK L +  F  LR+Q+
Sbjct:   24 EYQSIVGSLLYVAIATRPDIAQAVGIVSKFNSKPSQIHLSAAKRILRYLKGTSDLVLKFQQSEKGCSLIGYSDADWAGENDDRHSTTGNLFQLAGGPISWLSKNQSVVALSTSEAEYVALSTCAQEAIWLRRLLNSLNAVPPGPTIINEDNQGAIAIARNP-IAHMRTKHIDIHYHFIREAIQDQVIKVCYCPSEDMIADLLTKPLSKGKFEALRDQM 240          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A146LSQ0_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LSQ0_LYGHE)

HSP 1 Score: 205 bits (522), Expect = 1.360e-60
Identity = 116/286 (40.56%), Postives = 170/286 (59.44%), Query Frame = 0
Query:    1 MHIDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGEEQRE--YRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSL-RVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERV 283
            MHI++DP++ T+ + Q++Y   +L RF M    P  T  +    ++++                    EG E  +  Y+  VGSL++ A CTRPD++F V  LSR   +P   H +  KRVL+YL+GT D  + +++  D   LHG+ D+DY +D + R SVTGYVF L+SG ISWSSK Q  VA ST E+EY+++  A +EA++LR++L  L  +      +++ DN+GA+DL  N     +RTKHID+ HH +R+ + NG VSI K ST   VAD+LTK L  V
Sbjct:   56 MHIERDPITGTICVDQKRYIESVLKRFHMSDCKPQGTPMEHGLKLMKN--------------------EGSECADVPYQTAVGSLMYAANCTRPDLSFAVGALSRFNANPNMTHWSYVKRVLRYLQGTCDGKLVFKKTEDP--LHGYADSDYADDPIDRISVTGYVFLLSSGAISWSSKKQPTVARSTTEAEYMSISNATQEALWLRMVLTELGELKPDMKIDIKCDNKGAVDLTKNS-THHSRTKHIDVHHHFIREAVKNGQVSITKESTEFMVADLLTKALPGV 318          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A7D9I9A7_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I9A7_PARCT)

HSP 1 Score: 202 bits (515), Expect = 1.840e-60
Identity = 114/290 (39.31%), Postives = 168/290 (57.93%), Query Frame = 0
Query:    1 MHIDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDF-KNFVVRSKSGAGKAAGATGAGKEALPLEGEEQREYRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRLR 289
            M I +D   +TL +SQ KY   ++ RFGM   NP  T  +  K F  R+                    E   +  Y++ +G L +++  TRPDIA  V +LS+ M +P++ H    KR+L+Y++GT  Y +++    +   LHG+ DA++  D  TRRS++GY+F +A   ISWSSK QS VA ST E+E++AL +A + A++LR LL  L     GPT ++EDNQGAI++A N   F  RTKHIDI  + +R+ I +  + +   ST D +ADI+TK L R  F +LR
Sbjct:    1 MSIKRDRAKKTLFISQEKYLEGVINRFGMQDCNPVSTPLETGKTFQKRADDE-----------------EPCNKETYQQAIGCLTYVSTSTRPDIAAAVGLLSQYMSNPSKDHWLGIKRLLRYIKGTLTYGLKFVANKNECDLHGYADANWAGDVDTRRSISGYIFKVADATISWSSKKQSTVAKSTTEAEFVALSQACQGAVWLRRLLSGLGCNTDGPTLIKEDNQGAIEIAKNPK-FHNRTKHIDITFYFIRERIESREIKVEYCSTHDMLADIMTKALPRERFEKLR 272          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A177U140_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U140_9BASI)

HSP 1 Score: 207 bits (527), Expect = 2.620e-60
Identity = 125/288 (43.40%), Postives = 165/288 (57.29%), Query Frame = 0
Query:    1 MHIDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGEEQREYRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRL 288
            + I +    R  T+SQ  Y  +IL R+GM    PA      K  +  +    G   G+    KE        + E+  LVG LL+LA+ TRPDIAF V  L+R M +P+  H  AAKRVL+YL GT D  +R+R   D   L G+ D+D+G D  TRRSV+GYVFFL   P++W SK+Q  V+VS+ E+EY+AL EA +EAI+   LL  L++   GP +L  DN GA  LA N      RTKHI I HH VRD   +G + + +V T D  AD++TK    VTF RL
Sbjct:  139 IRIHRSTCGRVATMSQSGYVSQILQRYGMADCKPA------KTPMADAMKNLGPRVGSMATVKE--------RHEFAALVGCLLWLAQGTRPDIAFQVGKLARFMANPSPEHTDAAKRVLRYLAGTRDLCLRFRH-TDVAQLVGYADSDHGADPTTRRSVSGYVFFLYGNPVTWRSKLQDTVSVSSTEAEYVALSEATREAIWAIQLLQELKLHANGPVDLHTDNTGAEALARNPQSHQ-RTKHIRIHHHLVRDCNADGTIKVKRVHTDDNPADLMTK---TVTFARL 407          
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA)

HSP 1 Score: 201 bits (512), Expect = 1.080e-59
Identity = 115/278 (41.37%), Postives = 166/278 (59.71%), Query Frame = 0
Query:   14 LSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKSGAGKAAGATGAGKEALPLEGE--EQREYRELVGSLLFLARCTRPDIAFPVMMLSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADYGNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKEAIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHHHVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRLR 289
            + Q+KYA EIL RF M+  NP  T    +  +  SK                  L+GE  +   ++ +VGSL++L   TRPDI + V ++SR M+ PT  H+ AAKRV +YL+GTTD  + Y+ K +G  L GF D++Y  D   RRS +G+VF + SG ISW+SK Q +V +ST E+E+IA   +A +AI+LR +L+ L   Q GPT +  DN   I L+ N  +   R+KHID+R+H +RDL+   ++ +    + DQVADILTK L+   F +LR
Sbjct:   38 IGQKKYAHEILERFNMENCNPVGT--PTEPGLKLSKD-----------------LDGERVDSTYFKRIVGSLMYLTT-TRPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDLGVFYK-KINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEELHFYQQGPTVIHCDNSSTIKLSRNP-ILHGRSKHIDVRYHFLRDLVIEKIIDLVYCRSEDQVADILTKPLKLEAFEKLR 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig176330.4610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V5GT76_ANOGL2.070e-6341.78Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7N0A8_LASNI1.360e-6241.84Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A0C3AUA9_9AGAM1.400e-6240.74Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A6H5IY10_9HYME6.570e-6242.07Uncharacterized protein (Fragment) n=1 Tax=Trichog... [more]
A0A146HFR8_MYCCL5.930e-6141.16Polyprotein (Fragment) n=1 Tax=Mycena chlorophos T... [more]
A0A1X7SF09_AMPQE9.010e-6147.25Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A146LSQ0_LYGHE1.360e-6040.56Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9I9A7_PARCT1.840e-6039.31Uncharacterized protein n=2 Tax=Paramuricea clavat... [more]
A0A177U140_9BASI2.620e-6043.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151SR20_CAJCA1.080e-5941.37Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 75..284
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 75..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig176330contigH-elongata_contig176330:405..1295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig176330.4610.1mRNA_H-elongata_contig176330.4610.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig176330 405..1310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig176330.4610.1 ID=prot_H-elongata_contig176330.4610.1|Name=mRNA_H-elongata_contig176330.4610.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
MHIDQDPVSRTLTLSQRKYAGEILARFGMDRANPALTCGDFKNFVVRSKS
GAGKAAGATGAGKEALPLEGEEQREYRELVGSLLFLARCTRPDIAFPVMM
LSRAMQSPTRGHMAAAKRVLKYLRGTTDYAIRYRRKADGLCLHGFVDADY
GNDRVTRRSVTGYVFFLASGPISWSSKMQSLVAVSTVESEYIALGEAAKE
AIYLRLLLDSLRVPQVGPTELREDNQGAIDLAANEGVFSARTKHIDIRHH
HVRDLITNGVVSIAKVSTADQVADILTKGLERVTFTRLREQILGWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like