prot_H-elongata_contig17495.4556.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17495.4556.1
Unique Nameprot_H-elongata_contig17495.4556.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length148
Homology
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BLAST of mRNA_H-elongata_contig17495.4556.1 vs. uniprot
Match: A0A6H5KHJ8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ8_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 5.220e-12
Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 0 
Query:   35 RLGSEECRAFDAYGRDKLNDNGKKLLAFSANHDLGIVNTFFGTLKNGISHIFN----GRENKYIDYTLTRQPDRKHVRNVVVYPHPSFISYHAVVAAHVKLLGHFANNR 139
            R G  + +   AYGRD +N+NG++LL  ++++ L + NT+F T K G+ H F     G+E   +++ LTRQ +R+ VRNV V       S H +V   V+LL   A NR
Sbjct:   11 RGGCCDAKFMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLEFILTRQTERRFVRNVSVKRVDFKDSDHNLVLTTVRLLPRVAPNR 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17495.4556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHJ8_9PHAE5.220e-1238.53Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 30..131
e-value: 8.9E-8
score: 33.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17495contigH-elongata_contig17495:88..531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17495.4556.1mRNA_H-elongata_contig17495.4556.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17495 88..531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17495.4556.1 ID=prot_H-elongata_contig17495.4556.1|Name=mRNA_H-elongata_contig17495.4556.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
FWAALDKAVKEVLGHEQLFVLWMLTGVHDGGRVGRLGSEECRAFDAYGRD
KLNDNGKKLLAFSANHDLGIVNTFFGTLKNGISHIFNGRENKYIDYTLTR
QPDRKHVRNVVVYPHPSFISYHAVVAAHVKLLGHFANNRPGRRVTRPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf