prot_H-elongata_contig17270.4465.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17270.4465.1
Unique Nameprot_H-elongata_contig17270.4465.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length435
Homology
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: D7FQ41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ41_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.110e-95
Identity = 164/294 (55.78%), Postives = 197/294 (67.01%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANLL 294
            MS +QTGV++T ++P  PA++ LRKGDV+MKVDGI VANDGSIPFR GERV+L+YYMSQLFP DK  VELLRD  +M VTV L+VS+FLCPVHFGGR PSYF+LGGLVFTVMS PYLE                                                            E++E AGGL+HLLS A+HG + + DE+IVIL QVLAHE+N GY G  NMQLL+FNG RV SLKHL RL D N + FLRF+LF +++IVL+AAGVP AT QIC DNSIP+PRS++L+
Sbjct:  249 MSPQQTGVMITGVQPTCPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVMSVTVPLYVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLE-----------------------------------------------------------HEIEEGAGGLAHLLSTAEHGVRASNDEDIVILTQVLAHEVNVGYEGFSNMQLLSFNGERVKSLKHLVRLADANRQEFLRFELFRDRLIVLEAAGVPDATTQICKDNSIPSPRSSDLV 483          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: A0A6H5KXW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW0_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 4.350e-74
Identity = 143/294 (48.64%), Postives = 168/294 (57.14%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANLL 294
            MS +QTGV+VT ++P  PA++ LRKGDV+MKVDGI VANDGSIPFR GERV+L+YYMSQLFP DK  VELLRD  +M VTV L VS+ LCPVHFGGR PSYF+LGGLVFTVMS PYLEV                                                                                             LAHE+N GY G  NMQLL+FNG RV SL+HL RL D N + FLRF+LF +++IVL+AAGVP AT QIC DNSIP+PRS++L+
Sbjct:  257 MSPQQTGVMVTCVQPTYPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRDDSVMSVTVPLSVSDVLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEV---------------------------------------------------------------------------------------------LAHEVNVGYEGFSNMQLLSFNGERVKSLRHLVRLADANRQEFLRFELFRDRLIVLEAAGVPDATTQICKDNSIPSPRSSDLV 457          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: A0A835ZA79_9STRA (Trypsin-like cysteine/serine peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA79_9STRA)

HSP 1 Score: 226 bits (575), Expect = 4.190e-65
Identity = 125/289 (43.25%), Postives = 163/289 (56.40%), Query Frame = 0
Query:    6 TGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDG-NTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            TGVLV+ ++  APA   LR GDV++ VDGI VANDGS+PFR GERV+LRYY SQLF GD V+V LLRD     VT  L V   LCP+HF G PP+Y ++GGLVFTV+S PYL  ++   +S  A                                                         L HL++LA  G++   DEE+VIL QVLAH  N GY G++N+ LL FNG  V+SL+HL  LVD      ++RFD +P++++V+DAA +   T ++C DN+IPA RS  L
Sbjct:  239 TGVLVSDVDATAPAAAVLRPGDVILSVDGIQVANDGSVPFREGERVALRYYFSQLFRGDAVSVTLLRDGAAATVTAPLCVPGHLCPIHFDGAPPAYAVVGGLVFTVLSEPYLREALEAHRSAFA---------------------------------------------------------LPHLVALAHFGKRARADEEVVILTQVLAHPANLGYEGMENLHLLKFNGEPVSSLRHLCALVDACGAAGYMRFDFYPDRVVVMDAAQLSRCTAEVCEDNAIPASRSKAL 470          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: A0A1D6NRH4_MAIZE (Protease Do-like 9 n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6NRH4_MAIZE)

HSP 1 Score: 170 bits (430), Expect = 1.850e-46
Identity = 101/293 (34.47%), Postives = 149/293 (50.85%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            M + Q GV V  +EP AP    L+  D+V+  DGI++ANDG++PFR GER+   Y +SQ + G+K  V++L +  +    + L +++ L P H  GRPPSY+I+ G VF V+S PYL                                     S +A C  G                 D +      LL    H   Q+ DE++V+++QVL  ++N GY  + N+Q+LAFNG  VT+LKHLA +V+   E FL+FDL  +Q++VL+     AAT  I   + IP+  S +L
Sbjct:   12 MKANQKGVRVRRVEPTAPETGCLQPSDIVLSFDGIDIANDGTVPFRRGERIGFSYLVSQKYTGEKARVKVLPNSNVHEFNIKLAINKRLIPAHIKGRPPSYYIVAGFVFMVVSVPYLR------------------------------------SESAICQYG----------------KDYEYDAPVKLLDKHLHAMAQSSDEQLVVVSQVLVADINIGYEDIVNIQVLAFNGTPVTNLKHLATMVEECNEAFLKFDLDHDQVVVLETKTAKAATQDIVTTHCIPSAVSEDL 252          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: K3XVZ6_SETIT (Uncharacterized protein n=15 Tax=Panicoideae TaxID=147369 RepID=K3XVZ6_SETIT)

HSP 1 Score: 171 bits (433), Expect = 1.030e-43
Identity = 102/293 (34.81%), Postives = 147/293 (50.17%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            M S+Q GV V  +EP AP    L   D+++  DGI++ANDG++PFRHGER+   Y +SQ + G+K  V+LLR+  +    + L   + L P H  GRPPSY+I+ G VFTV+S PYL                                                 R +Y          D +      LL    H   Q+ DE++V+++QVL  ++N GY  + N+Q+LAFNG  V +LKHLA +V+   E FL+FDL  +Q++VL+     AAT  I   + IP+  S +L
Sbjct:  367 MKSDQKGVRVRRVEPTAPESGCLHPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGEKARVKLLRNSKIHEFNIKLATHKRLIPAHIKGRPPSYYIVAGFVFTVVSVPYL-------------------------------------------------RSEYGK--------DYEYDAPVKLLDKHSHAMAQSPDEQLVVVSQVLVSDINIGYEDIVNIQVLAFNGTPVKNLKHLATMVEECNEAFLKFDLDYDQLVVLETKTAKAATQDILTTHCIPSAMSEDL 602          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: A0A2N9F8V8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F8V8_FAGSY)

HSP 1 Score: 171 bits (432), Expect = 2.010e-43
Identity = 104/305 (34.10%), Postives = 154/305 (50.49%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCV------------GFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            M  +Q GV +  IEP AP    L+  DV++  DGIN+ANDG++PFR GER+   Y +SQ + GD   V++LRD  ++   + L   + L P H  G+PPSY+I+ G VFT +S PYL   +  +  +L               W    +      S  Y C             GF +  QY          D +      LL    H   ++ DE++V+++QVL  ++N GY  L N Q+LAFNG  V +LK LA +V+   + +L+F+L  +QI+VL +    AAT  I   + IP+  S +L
Sbjct:  348 MGPDQKGVRIRRIEPTAPESQVLKPSDVILSFDGINIANDGTVPFRQGERIGFSYLVSQKYTGDYALVKVLRDSNILEFNIGLATHKRLIPAHIRGKPPSYYIIAGFVFTTVSVPYLRSELFSKSFILM--------------WMCNSIPRCGILSKFYACACKRDFYVYFLTPGFFTYLQYGK--------DYEFDAPVKLLDKHLHAMAESVDEQLVVVSQVLVADINIGYEDLVNTQVLAFNGKPVKNLKSLASMVESCEDEYLKFELEYQQIVVLQSKTAKAATLDILATHCIPSAMSDDL 630          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: A0A6P6T9Q9_COFAR (protease Do-like 9 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6T9Q9_COFAR)

HSP 1 Score: 169 bits (427), Expect = 5.560e-43
Identity = 101/293 (34.47%), Postives = 145/293 (49.49%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            M+S Q GV +  IEP AP    L+  DV++  DG+N+ANDG++PFRHGER+   Y +SQ + GD  AV++LR+  +   ++ L   + L P H   +PPSY+I+GG VFT +S PYL      +    A V                                                          LL    HG  Q+ DE++V+++QVL  ++N GY  + N Q++AFNG  V +LK LA +V+   E FL+FDL  +QI+VL      AAT  I   + IP+P S +L
Sbjct:  348 MTSNQKGVRIRRIEPTAPESHVLKPSDVIISFDGVNIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRNSVMFEFSIKLATHKRLIPAHIREKPPSYYIVGGFVFTAVSVPYLRSEYGKEYEFEAPVK---------------------------------------------------------LLDKHLHGMAQSVDEQVVLVSQVLVADINIGYEEIVNTQVMAFNGKPVKNLKILAAMVEACDEEFLKFDLEYDQIVVLQTKSAKAATADILAMHCIPSPMSDDL 583          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: J3MCQ9_ORYBR (PDZ_3 domain-containing protein n=13 Tax=Oryzinae TaxID=1648021 RepID=J3MCQ9_ORYBR)

HSP 1 Score: 166 bits (419), Expect = 1.150e-42
Identity = 95/293 (32.42%), Postives = 147/293 (50.17%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            M S+Q GV +  +EP AP  + L+  D+V+  DG+++ANDG++PFRHGER+   Y +SQ + G+K  V++LR+  ++   + L   + L P H  G+PPSY+I+ G VF  +S PYL      +    A V                                                          LL    H   Q+ DE++V+++QVL  ++N GY  + N+Q+LAFNG  + +LKHLA +V+  +E FL+FD+  EQ++VL+     AAT  I   + IP+  S +L
Sbjct:  230 MKSDQKGVRIRRVEPTAPEYEFLQSSDIVLSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGEKAHVKVLRNSKVLEFNIKLATHKRLIPAHIKGKPPSYYIVAGFVFMAVSVPYLRSEYGKEYEYDAPVK---------------------------------------------------------LLDKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVNIQVLAFNGKTIKNLKHLATMVEACSEEFLKFDMDYEQLVVLETKTAKAATQDILTTHCIPSAISEDL 465          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: A9T734_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9T734_PHYPA)

HSP 1 Score: 165 bits (417), Expect = 2.220e-42
Identity = 100/293 (34.13%), Postives = 145/293 (49.49%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            M S Q GV +  +EP APA   LR  D++M  DGI++ANDG++PFRHGER+   Y +S+ + G+   V++LRD       + L   + L P H  G+PPSY+IL G+VF  +S PYL           A V +                                                     L  LL    H   Q++DE++V+++QVL  ++N GY  + N Q++AFN   V +LKHLA LV+  T+PFLRF L  +QI++L+     AAT +I   + IP+  S +L
Sbjct:  228 MKSTQKGVRIRRVEPTAPAFAQLRASDILMSFDGIDIANDGTVPFRHGERIGFSYLVSKKYSGECAKVKILRDGKSKEFDIDLVNHKRLVPAHIKGKPPSYYILAGIVFAAISVPYLRSEYGKDYDYDAPVKL-----------------------------------------------------LDKLL----HSMSQSEDEQLVVVSQVLVADINIGYEDIVNTQVVAFNDTPVRNLKHLANLVEKCTDPFLRFGLDYQQIVILETQTAKAATPEILATHCIPSAMSHDL 463          
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Match: A0A0B0M667_GOSAR (Protease Do-like 9 n=1 Tax=Gossypium arboreum TaxID=29729 RepID=A0A0B0M667_GOSAR)

HSP 1 Score: 159 bits (401), Expect = 2.870e-42
Identity = 95/293 (32.42%), Postives = 140/293 (47.78%), Query Frame = 0
Query:    1 MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGERVSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPSYFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLLAGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQNKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGNTEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANL 293
            M  EQ GV +  ++P AP    L+  D+V+  DG+++ANDG++PFRHGER+   Y +SQ + GD  A+++LR   ++   + L     L P H  GRPPSY+I+ G VFT +S PYL           A V +                                                     L  LL    H   Q+ DE++V+++QVL  ++N GY  + N Q+LA NG  + +L+ LA +V+   + FL+FDL  EQI+VL      AAT  I   + IP+  S +L
Sbjct:   12 MKPEQKGVRIRRVDPTAPESGVLKSSDIVLSFDGVDIANDGTVPFRHGERIGFSYLVSQKYAGDSSAIKVLRSSAILNFNIKLTSHRRLIPAHNKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKL-----------------------------------------------------LDKLL----HSMPQSPDEQLVVVSQVLVSDINIGYEDIVNTQVLALNGKPMKNLRRLAEMVENCDDEFLKFDLEYEQIVVLRTKTAKAATPDILATHCIPSAMSVDL 247          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17270.4465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ41_ECTSI1.110e-9555.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXW0_9PHAE4.350e-7448.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA79_9STRA4.190e-6543.25Trypsin-like cysteine/serine peptidase domain-cont... [more]
A0A1D6NRH4_MAIZE1.850e-4634.47Protease Do-like 9 n=3 Tax=Zea mays TaxID=4577 Rep... [more]
K3XVZ6_SETIT1.030e-4334.81Uncharacterized protein n=15 Tax=Panicoideae TaxID... [more]
A0A2N9F8V8_FAGSY2.010e-4334.10Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6P6T9Q9_COFAR5.560e-4334.47protease Do-like 9 n=3 Tax=Coffea TaxID=13442 RepI... [more]
J3MCQ9_ORYBR1.150e-4232.42PDZ_3 domain-containing protein n=13 Tax=Oryzinae ... [more]
A9T734_PHYPA2.220e-4234.13Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
A0A0B0M667_GOSAR2.870e-4232.42Protease Do-like 9 n=1 Tax=Gossypium arboreum TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 1..85
e-value: 5.3E-11
score: 44.3
NoneNo IPR availableGENE3D2.30.42.50coord: 88..143
e-value: 7.1E-8
score: 34.0
coord: 169..298
e-value: 1.2E-29
score: 104.6
NoneNo IPR availablePANTHERPTHR45980FAMILY NOT NAMEDcoord: 1..294
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..434
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..117
IPR001478PDZ domainPFAMPF13180PDZ_2coord: 3..82
e-value: 2.4E-7
score: 31.0
IPR001478PDZ domainPROSITEPS50106PDZcoord: 1..39
score: 9.049
IPR041517Protease Do-like, PDZ domainPFAMPF17815PDZ_3coord: 187..291
e-value: 1.1E-26
score: 93.4
coord: 91..123
e-value: 6.2E-6
score: 26.1
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 6..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17270contigH-elongata_contig17270:55..2201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17270.4465.1mRNA_H-elongata_contig17270.4465.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17270 1..3203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17270.4465.1 ID=prot_H-elongata_contig17270.4465.1|Name=mRNA_H-elongata_contig17270.4465.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=435bp
MSSEQTGVLVTSIEPMAPAIDTLRKGDVVMKVDGINVANDGSIPFRHGER
VSLRYYMSQLFPGDKVAVELLRDRGLMFVTVSLFVSEFLCPVHFGGRPPS
YFILGGLVFTVMSNPYLEVSVSGQQSLLASVAVSRVQNNMWHGWFHVLLL
AGSFSSNAYCCVGFVSRDQYHSTSRTPAEMDEQAGGLSHLLSLAQHGRKQ
NKDEEIVILAQVLAHELNEGYGGLKNMQLLAFNGVRVTSLKHLARLVDGN
TEPFLRFDLFPEQIIVLDAAGVPAATDQICGDNSIPAPRSANLLPPKAAP
ANVSGEASESNEEEGYEETGIAMDGQPLPAINGAPQPSVSETVAMLADAR
KRGIQGRRLDGREGSRLRSLASAAIGRLRGSILRSGVGDQRVTGRAHRDA
SFGSWGRQARKSKFLASSRGRRRGQSREIRRSRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR041517DEGP_PDZ
IPR036034PDZ_sf