prot_H-elongata_contig170586.4366.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig170586.4366.1
Unique Nameprot_H-elongata_contig170586.4366.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 192 bits (489), Expect = 4.880e-62
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 192 bits (488), Expect = 6.930e-62
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 192 bits (489), Expect = 9.860e-62
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:   23 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: A0A176VS41_MARPO (Histone H4 n=3 Tax=Marchantiophyta TaxID=3195 RepID=A0A176VS41_MARPO)

HSP 1 Score: 193 bits (491), Expect = 1.290e-61
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:   53 MSGRGKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 155
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: B7FX68_PHATC (Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FX68_PHATC)

HSP 1 Score: 191 bits (486), Expect = 1.400e-61
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHAR KTVTAMDV+YALKRQG+TLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 103
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: C1MUM2_MICPC (Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 191 bits (486), Expect = 1.400e-61
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: A0A067CU13_SAPPC (Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU13_SAPPC)

HSP 1 Score: 191 bits (486), Expect = 1.400e-61
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI+DSVTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIKDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.400e-61
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            M+GR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: A0A7S3RVL2_9SPIT (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 191 bits (486), Expect = 1.440e-61
Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Match: H4_ARATH (Histone H4 n=272 Tax=Eukaryota TaxID=2759 RepID=H4_ARATH)

HSP 1 Score: 191 bits (485), Expect = 1.990e-61
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYGFGG 103
            MSGR KGGKGLGKGGAKRHRKV RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHAR KTVTAMDV+YALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig170586.4366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024G0M5_9STRA4.880e-6296.12Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI... [more]
H4_SOLLC6.930e-6295.15Histone H4 n=13 Tax=cellular organisms TaxID=13156... [more]
A0A3L6V663_9STRA9.860e-6296.12Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A176VS41_MARPO1.290e-6195.15Histone H4 n=3 Tax=Marchantiophyta TaxID=3195 RepI... [more]
B7FX68_PHATC1.400e-6195.15Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 Rep... [more]
C1MUM2_MICPC1.400e-6195.15Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1M... [more]
A0A067CU13_SAPPC1.400e-6195.15Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepI... [more]
F0W2L9_9STRA1.400e-6195.15Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A7S3RVL2_9SPIT1.440e-6195.15Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re... [more]
H4_ARATH1.990e-6194.17Histone H4 n=272 Tax=Eukaryota TaxID=2759 RepID=H4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 5..16
score: 87.25
coord: 77..89
score: 75.34
coord: 89..100
score: 97.79
coord: 20..39
score: 89.12
coord: 62..76
score: 91.96
coord: 40..60
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 16..90
e-value: 4.2E-28
score: 109.4
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 35..96
e-value: 2.4E-7
score: 30.8
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..103
e-value: 7.2E-58
score: 195.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..102
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..103
NoneNo IPR availablePANTHERPTHR10484:SF171coord: 1..103
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig170586contigH-elongata_contig170586:679..990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig170586.4366.1mRNA_H-elongata_contig170586.4366.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig170586 661..990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig170586.4366.1 ID=prot_H-elongata_contig170586.4366.1|Name=mRNA_H-elongata_contig170586.4366.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
MSGRVKGGKGLGKGGAKRHRKVFRDNIQGITKPAIRRLARRGGVKRISGL
IYEETRGVLKVFLENVIRDSVTYTEHARHKTVTAMDVIYALKRQGRTLYG
FGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR035425CENP-T/H4_C
IPR009072Histone-fold
IPR019809Histone_H4_CS