prot_H-elongata_contig168049.4244.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig168049.4244.1
Unique Nameprot_H-elongata_contig168049.4244.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: A0A835YR11_9STRA (MEMO1 family (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR11_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.480e-19
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    2 LLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDH 48
            LL  +L DP NFFIVSSDFCHWG+RFRYQP D + GA+HE+IRWLDH
Sbjct:  233 LLAPYLRDPANFFIVSSDFCHWGARFRYQPHDAARGAVHEYIRWLDH 279          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: D7G5V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5V7_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 7.160e-18
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHK 49
            R+L  +LED  NFFI+S+DFCHWGSRFRYQP   +H AIHEHI WLDH+
Sbjct:  225 RILAPYLEDLTNFFIISTDFCHWGSRFRYQPLGAAHSAIHEHISWLDHE 273          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: A0A7S3XLT3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLT3_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 7.190e-18
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHK 49
            RLL  +L+DP  FFI+SSDFCHWG RFRYQP +  HG IH++I WLDHK
Sbjct:  193 RLLAPYLDDPNCFFIISSDFCHWGQRFRYQPYEEDHGEIHQYIEWLDHK 241          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: F0WBS4_9STRA (Memolike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBS4_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.240e-17
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHKV 50
            RLL QF+ D  NFF++SSDFCHWG+RFRYQP D S+G IH++I+ LDH+ 
Sbjct:  174 RLLAQFMNDQSNFFVISSDFCHWGARFRYQPHDASYGEIHDYIKHLDHEA 223          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: A0A5D6Y2S4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2S4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.390e-16
Identity = 30/49 (61.22%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHK 49
            ++L  +LED  N F++SSDFCHWGSRFRYQP D ++G IHE+I +LDH+
Sbjct:  177 KILAPYLEDEENLFVISSDFCHWGSRFRYQPHDSAYGEIHEYITYLDHE 225          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: A0A024G9G4_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G9G4_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-15
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHKV 50
            RLL +F+ D  NFF++SSDFCHWG+RFRYQP D  HG IHE+I  LD + 
Sbjct:  174 RLLAEFMSDASNFFVISSDFCHWGARFRYQPYDAVHGEIHEYIEHLDQEA 223          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: W2JHV0_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2JHV0_PHYPR)

HSP 1 Score: 75.5 bits (184), Expect = 3.910e-15
Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHK 49
            ++L  +LE+  N F++SSDFCHWG RFRYQP D ++G IHE+I++LDH+
Sbjct:  132 KILAPYLENDENLFVISSDFCHWGPRFRYQPHDSTYGEIHEYIKYLDHQ 180          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: A0A8K1C4Y3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4Y3_PYTOL)

HSP 1 Score: 75.9 bits (185), Expect = 4.370e-15
Identity = 29/47 (61.70%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLD 47
            R+L  ++ED  N F++SSDFCHWGSRFRYQP D ++G IHE+I++LD
Sbjct:  171 RILAPYIEDEGNLFVISSDFCHWGSRFRYQPHDSTYGEIHEYIKYLD 217          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: A0A0W8C3E4_PHYNI (50S ribosomal protein L9 n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8C3E4_PHYNI)

HSP 1 Score: 75.5 bits (184), Expect = 4.880e-15
Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHK 49
            ++L  +LE+  N F++SSDFCHWG RFRYQP D ++G IHE+I++LDH+
Sbjct:  150 KILAPYLENDENLFVISSDFCHWGPRFRYQPHDSTYGEIHEYIKYLDHQ 198          
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Match: H3GBV9_PHYRM (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=H3GBV9_PHYRM)

HSP 1 Score: 75.5 bits (184), Expect = 7.250e-15
Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHK 49
            ++L  +LE+  N F++SSDFCHWG RFRYQP D ++G IHE+I++LDH+
Sbjct:  180 KILAPYLENDENLFVISSDFCHWGPRFRYQPHDSTYGEIHEYIKYLDHQ 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig168049.4244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YR11_9STRA5.480e-1974.47MEMO1 family (Fragment) n=1 Tax=Tribonema minus Ta... [more]
D7G5V7_ECTSI7.160e-1869.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XLT3_HETAK7.190e-1867.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0WBS4_9STRA3.240e-1764.00Memolike protein putative n=1 Tax=Albugo laibachii... [more]
A0A5D6Y2S4_9STRA6.390e-1661.22Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024G9G4_9STRA1.720e-1562.00Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
W2JHV0_PHYPR3.910e-1557.14Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A8K1C4Y3_PYTOL4.370e-1561.70Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8C3E4_PHYNI4.880e-1557.1450S ribosomal protein L9 n=9 Tax=Peronosporaceae T... [more]
H3GBV9_PHYRM7.250e-1557.14Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002737MEMO1 familyPFAMPF01875Memocoord: 3..47
e-value: 7.8E-8
score: 31.8
IPR002737MEMO1 familyPANTHERPTHR11060PROTEIN MEMO1coord: 2..49
NoneNo IPR availableGENE3D3.40.830.10coord: 1..52
e-value: 1.2E-15
score: 59.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig168049contigH-elongata_contig168049:800..1375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig168049.4244.1mRNA_H-elongata_contig168049.4244.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig168049 800..1375 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig168049.4244.1 ID=prot_H-elongata_contig168049.4244.1|Name=mRNA_H-elongata_contig168049.4244.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
RLLLQFLEDPRNFFIVSSDFCHWGSRFRYQPRDPSHGAIHEHIRWLDHKV
RR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002737MEMO1_fam