prot_H-elongata_contig167641.4223.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig167641.4223.1
Unique Nameprot_H-elongata_contig167641.4223.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: D8LN21_ECTSI (Threonine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN21_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 5.770e-22
Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0
Query:   11 QVSEALEATGEPPVVDRSGFSYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            +VSEALEA GEP + + SG SYSVPTGNFG+VLAGYYAKRMGLPVD+LVVA NENDILHR
Sbjct:  259 RVSEALEAAGEP-LEEGSGLSYSVPTGNFGDVLAGYYAKRMGLPVDRLVVAVNENDILHR 317          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A7S2RV02_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RV02_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.340e-16
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 0
Query:   27 RSGFSYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            RS  S+SVPTGNFG++LAGYYAKRMGLPVD+LVVATNENDILHR
Sbjct:  320 RSKISFSVPTGNFGDILAGYYAKRMGLPVDQLVVATNENDILHR 363          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A7R9WNW0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WNW0_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.570e-16
Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 0
Query:   32 YSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            Y+VPTGNFG++LAGYYAK+MGLPV KLVVATNENDILHR
Sbjct:   29 YAVPTGNFGDILAGYYAKQMGLPVGKLVVATNENDILHR 67          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A7R9WCH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WCH9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.640e-16
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   16 LEATGEPPVVDRSGFSYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            L  T + P V    FS  VPTGNFG++LAGYYAKRMGLPV KL+VATNENDILHR
Sbjct:   28 LRVTDKHPDVPEVHFS--VPTGNFGDILAGYYAKRMGLPVGKLIVATNENDILHR 80          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A381SG24_9ZZZZ (Threonine synthase n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381SG24_9ZZZZ)

HSP 1 Score: 79.7 bits (195), Expect = 8.260e-16
Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:   31 SYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            S++VPTGNFGNVLAGYYAKRMGLP+DKLV+ TNENDILHR
Sbjct:  249 SFAVPTGNFGNVLAGYYAKRMGLPIDKLVIGTNENDILHR 288          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A3D0TMU0_9DELT (Threonine synthase n=9 Tax=root TaxID=1 RepID=A0A3D0TMU0_9DELT)

HSP 1 Score: 79.7 bits (195), Expect = 8.270e-16
Identity = 38/46 (82.61%), Postives = 42/46 (91.30%), Query Frame = 0
Query:   26 DRSGF-SYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            D S F S++VPTGNFGNVLAGYYA+RMGLP+DKLVV TNENDILHR
Sbjct:  242 DNSEFVSFAVPTGNFGNVLAGYYARRMGLPIDKLVVGTNENDILHR 287          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A7S3TB83_EMIHU (Threonine synthase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TB83_EMIHU)

HSP 1 Score: 79.0 bits (193), Expect = 1.620e-15
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:   17 EATGEPPVVDRSGFSYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            EAT     ++ +  SYSVPTGNFG++LAG+YAK+MGLPV KL+VATNENDILHR
Sbjct:  291 EATSPGAALEGTQVSYSVPTGNFGDILAGWYAKQMGLPVRKLIVATNENDILHR 344          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A6V2V148_EMIHU (Threonine synthase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2V148_EMIHU)

HSP 1 Score: 79.0 bits (193), Expect = 1.630e-15
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 0
Query:   17 EATGEPPVVDRSGFSYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            EAT     ++ +  SYSVPTGNFG++LAG+YAK+MGLPV KL+VATNENDILHR
Sbjct:  291 EATSPGAALEGTQVSYSVPTGNFGDILAGWYAKQMGLPVRKLIVATNENDILHR 344          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A520PBH9_9PROT (Threonine synthase n=5 Tax=root TaxID=1 RepID=A0A520PBH9_9PROT)

HSP 1 Score: 78.6 bits (192), Expect = 2.130e-15
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:   31 SYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            S+ VPTGNFGNVLAGYYAKRMGLP+DKLV+ TNENDILHR
Sbjct:  249 SFVVPTGNFGNVLAGYYAKRMGLPIDKLVIGTNENDILHR 288          
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Match: A0A0M0JSA7_9EUKA (Threonine synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSA7_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 2.740e-15
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 0
Query:   20 GEPPVVDRSGFSYSVPTGNFGNVLAGYYAKRMGLPVDKLVVATNENDILHR 70
            G PP+V     S+SVPTGNFG++LAGYYAK+MGLPV KL+VATN+NDILHR
Sbjct:  194 GSPPLV-----SFSVPTGNFGDILAGYYAKQMGLPVGKLIVATNKNDILHR 239          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig167641.4223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN21_ECTSI5.770e-2281.67Threonine synthase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S2RV02_9STRA1.340e-1686.36Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7R9WNW0_9STRA4.570e-1687.18Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7R9WCH9_9STRA6.640e-1670.91Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A381SG24_9ZZZZ8.260e-1687.50Threonine synthase n=1 Tax=marine metagenome TaxID... [more]
A0A3D0TMU0_9DELT8.270e-1682.61Threonine synthase n=9 Tax=root TaxID=1 RepID=A0A3... [more]
A0A7S3TB83_EMIHU1.620e-1568.52Threonine synthase n=1 Tax=Emiliania huxleyi TaxID... [more]
A0A6V2V148_EMIHU1.630e-1568.52Threonine synthase n=2 Tax=Emiliania huxleyi TaxID... [more]
A0A520PBH9_9PROT2.130e-1587.50Threonine synthase n=5 Tax=root TaxID=1 RepID=A0A5... [more]
A0A0M0JSA7_9EUKA2.740e-1572.55Threonine synthase n=1 Tax=Chrysochromulina tobini... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1100coord: 4..70
e-value: 2.9E-20
score: 74.5
NoneNo IPR availablePANTHERPTHR42690FAMILY NOT NAMEDcoord: 29..70
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 11..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig167641contigH-elongata_contig167641:816..1028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig167641.4223.1mRNA_H-elongata_contig167641.4223.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig167641 816..1028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig167641.4223.1 ID=prot_H-elongata_contig167641.4223.1|Name=mRNA_H-elongata_contig167641.4223.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
LSFVRSSFVAQVSEALEATGEPPVVDRSGFSYSVPTGNFGNVLAGYYAKR
MGLPVDKLVVATNENDILHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent