prot_H-elongata_contig165430.4119.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: A0A6H5L0N9_9PHAE (DNA polymerase zeta catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N9_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 2.600e-17 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
Query: 8 ASLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
A LS+MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR
Sbjct: 2230 ACLSIMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 2273
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: D7G846_ECTSI (DNA polymerase zeta catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G846_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 2.600e-17 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0
Query: 8 ASLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
A LS+MDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR
Sbjct: 2335 ACLSIMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 2378
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: W7T133_9STRA (Dna polymerase zeta subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T133_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.830e-15 Identity = 35/48 (72.92%), Postives = 44/48 (91.67%), Query Frame = 0
Query: 6 TQASLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRYN 53
++ +L V+D+LDLLGRTSEMAR+FGIDFFSVL+RGSQYRVEAV+ R +
Sbjct: 55 SRLNLEVLDRLDLLGRTSEMARVFGIDFFSVLNRGSQYRVEAVLGRVS 102
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: A0A7S0NZV1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZV1_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 1.810e-13 Identity = 32/46 (69.57%), Postives = 41/46 (89.13%), Query Frame = 0
Query: 6 TQASLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
TQ SL V D L+L+ RTSE+AR+FGIDF+SVL+RGSQYRVE+++LR
Sbjct: 16 TQLSLEVADALELISRTSELARVFGIDFYSVLTRGSQYRVESMLLR 61
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: A0A1W0A9K2_9STRA (DNA polymerase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9K2_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.200e-13 Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0
Query: 6 TQASLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
T+ +L VMD++ L+ RTSEMARLFGIDFFSVLSRGSQYRVEAV +R
Sbjct: 829 TELNLKVMDRMQLITRTSEMARLFGIDFFSVLSRGSQYRVEAVNIR 874
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: A0A067D8T0_SAPPC (DNA polymerase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D8T0_SAPPC) HSP 1 Score: 72.4 bits (176), Expect = 2.200e-13 Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0
Query: 6 TQASLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
T+ +L +MD+L L+ RTSEMARLFGIDFFSVLSRGSQYRVEAV +R
Sbjct: 844 TEVTLKLMDRLQLITRTSEMARLFGIDFFSVLSRGSQYRVEAVNIR 889
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: T0R4D0_SAPDV (DNA polymerase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R4D0_SAPDV) HSP 1 Score: 72.4 bits (176), Expect = 2.200e-13 Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0
Query: 6 TQASLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
T+ +L +MD+L L+ RTSEMARLFGIDFFSVLSRGSQYRVEAV +R
Sbjct: 848 TEVTLKLMDRLQLITRTSEMARLFGIDFFSVLSRGSQYRVEAVNIR 893
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: A0A1D1ZNX4_AUXPR (DNA polymerase (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZNX4_AUXPR) HSP 1 Score: 72.0 bits (175), Expect = 2.990e-13 Identity = 33/43 (76.74%), Postives = 42/43 (97.67%), Query Frame = 0
Query: 9 SLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
+LS++D+LD++GRTSE+AR FGIDFFSVLSRGSQYRVE++MLR
Sbjct: 99 NLSLLDRLDVVGRTSELARAFGIDFFSVLSRGSQYRVESMMLR 141
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: A0A1D2AAG3_AUXPR (DNA polymerase zeta catalytic subunit n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AAG3_AUXPR) HSP 1 Score: 72.0 bits (175), Expect = 3.020e-13 Identity = 33/43 (76.74%), Postives = 42/43 (97.67%), Query Frame = 0
Query: 9 SLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLR 51
+LS++D+LD++GRTSE+AR FGIDFFSVLSRGSQYRVE++MLR
Sbjct: 1618 NLSLLDRLDVVGRTSELARAFGIDFFSVLSRGSQYRVESMMLR 1660
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Match: A0A7S3VKE1_DUNTE (DNA polymerase (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VKE1_DUNTE) HSP 1 Score: 71.6 bits (174), Expect = 4.100e-13 Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 0
Query: 9 SLSVMDKLDLLGRTSEMARLFGIDFFSVLSRGSQYRVEAVMLRYNILYCNIL 60
SL +MD LDL+GRT+E+AR FGIDFFSVL+RGSQYRVE++MLR + CN L
Sbjct: 461 SLLMMDSLDLIGRTAELARTFGIDFFSVLTRGSQYRVESLMLRLSHA-CNYL 511 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165430.4119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig165430.4119.1 ID=prot_H-elongata_contig165430.4119.1|Name=mRNA_H-elongata_contig165430.4119.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bpback to top |