prot_H-elongata_contig16440.4067.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig16440.4067.1
Unique Name	prot_H-elongata_contig16440.4067.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	215

Homology

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.350e-57
Identity = 99/195 (50.77%), Postives = 138/195 (70.77%), Query Frame = 0

Query:   20 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            +S + +D  L  LY  V+ +++ ++   R+ CL +G  G F+  Q+DLTTVAG EY TF+ SY+  G   + R+ LA RAFPG+HTA+++  W++++++++F+  +G+ VEP DVFLAFTVDQG NVVNA +AL VPVV CN HR+ T V W LGIAG  +  +N V+G  MKKLAA VG FSHSAVNN +LK +
Sbjct:  245 MSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKEL 437

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.770e-57
Identity = 99/195 (50.77%), Postives = 134/195 (68.72%), Query Frame = 0

Query:   20 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            ++   ++  L  LYG V  +++ E+   R+  L +G  GPF+  Q+DLTT AG EY TF+ +++  G+  + RI LA RAFPGSHTA +++ W++K++ ++FS  +G+ V+PSDVFLAFTVDQG N++NA  AL V VV CN HRL T V W LGIAG  +   NP +G  MKKLAA VG FSHSAVNN ELK +
Sbjct:   52 MAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKEL 244

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 6.260e-57
Identity = 106/203 (52.22%), Postives = 137/203 (67.49%), Query Frame = 0

Query:   20 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKIS--------KQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            +S   ++ IL  +Y    + +   +  HR+SC+ LG  GPF+  Q+DLTTVA  EY TFS SYI     TI R+GLATRAFPGSHTA ++E W++K S         ++F+ ++G+ V+P DVFLAFTVDQG NVVNA   L+V V+ CNAHRL +V  W LGI G+ +T +NP + K MK+LAA VG FSHSAVNN ELK I
Sbjct:  227 MSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDI 429

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.910e-57
Identity = 99/195 (50.77%), Postives = 136/195 (69.74%), Query Frame = 0

Query:   20 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            +++  ++ +L  L+  V + ++ ++   R+ CL +G  G F+  Q+DLTTVAG EY TF+ SY+  G+  + R+ LATRAFPGSHTA++++ W++ ++ ++F+ L+G  VE  DVFLAFTVDQG NVVNA  AL VPVV CN HR+ + V W LGIAG+  TCKN    K MKKLAA VG FSHSAVNN  LK +
Sbjct:   56 MASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKN----KPMKKLAALVGVFSHSAVNNDMLKEL 246

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 3.450e-56
Identity = 98/195 (50.26%), Postives = 136/195 (69.74%), Query Frame = 0

Query:   20 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            ++A  ++ +L  L+  +++ ++ ++   R+ CL +G  G F+  Q+DLTTVAG EY TF+ SY+  G+  + R+ LATRAFPGSHTA++++ W++ ++ ++ + L+G  VE  DVFLAFTVDQG NVVNA  AL VPVV CN HR+ + V W LGIAG+  TCKN    K MKKLAA VG FSHSAVNN  LK +
Sbjct:   56 MAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKN----KPMKKLAALVGVFSHSAVNNDMLKEL 246

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.460e-56
Identity = 99/195 (50.77%), Postives = 134/195 (68.72%), Query Frame = 0

Query:   20 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            ++   ++  L  LYG V  +++ E+   R+  L +G  GPF+  Q+DLTT AG EY TF+ +++  G+  + RI LA RAFPGSHTA +++ W++K++ ++FS  +G+ V+PSDVFLAFTVDQG N++NA  AL V VV CN HRL T V W LGIAG  +   NP +G  MKKLAA VG FSHSAVNN ELK +
Sbjct:  247 MAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKEL 439

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 9.320e-56
Identity = 96/196 (48.98%), Postives = 134/196 (68.37%), Query Frame = 0

Query:   20 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVT-IKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            +++  ++ +L  LY  V++ ++ ++   R+  L +G  G F+   +DLTTVA  EY TF+ SY+  G+   + R+ LATRAFPGSHTA +++ W++ ++ ++F  L+G  V+P DVFL FTVDQG N+VNA  AL VPVV CN HR+ + V W LGIAG  +TCKN ++G  MKKLAA VG FSHSAVNN  LK I
Sbjct:   52 MASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEI 247

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.600e-26
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0

Query:  115 KISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            +++ ++F+ ++G+ V+P DVFLAFTVDQG NVVNA   L+V V+ CNAHRL +V  W LGI G+ +T +NP + K MK+LAA VG FSHSAVNN ELK I
Sbjct:    2 QLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDI 101

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.240e-25
Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 0

Query:  115 KISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNN 208
            +++K++F   +G+ VEPSDVFLAFTVDQG NVVNA  AL V VV CN HR+ + V W LGIAG+  TC+N  +G  MKKLAA VG FS SAVNN
Sbjct:    6 QLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNN 99

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BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.990e-22
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 0

Query:  125 VGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI 214
            +G+ V PS+ FLAFTVDQG N++NA  AL+V VV CN HR+ T V W LGIA   +  KNP +G  MKKLAA VG FSHSAVNN ELK +
Sbjct:    1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKEL 88

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot

BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13


Match Name	E-value	Identity	Description
A0A6H5JRT6_9PHAE	2.350e-57	50.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTB8_9PHAE	3.770e-57	50.77	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KJ52_9PHAE	6.260e-57	52.22	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JQI6_9PHAE	6.910e-57	50.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZU3_9PHAE	3.450e-56	50.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JGG8_9PHAE	3.460e-56	50.77	Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec...	[more]
A0A6H5JXV5_9PHAE	9.320e-56	48.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAN7_9PHAE	1.600e-26	58.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KDJ6_9PHAE	1.240e-25	61.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAS2_9PHAE	1.990e-22	61.11	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..214
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.569

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig16440	contig	H-elongata_contig16440:2914..4412 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig16440.4067.1	mRNA_H-elongata_contig16440.4067.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig16440 1867..5122 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig16440.4067.1 ID=prot_H-elongata_contig16440.4067.1|Name=mRNA_H-elongata_contig16440.4067.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp
MTLASCFSWVFGILTTPLELSAERYDDILLNLYGGVRETLLAEIHEHRDS
CLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAF
PGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAI
EALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGK
FSHSAVNNSELKTI*