mRNA_H-elongata_contig16440.4067.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 361 bits (927), Expect = 8.870e-112 Identity = 193/399 (48.37%), Postives = 262/399 (65.66%), Query Frame = 1
Query: 514 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKIS--------KQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRVLDKP-GIDPVPYEQVNKSELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEELGHHF 1683
+S ++ IL +Y + + + HR+SC+ LG GPF+ Q+DLTTVA EY TFS SYI TI R+GLATRAFPGSHTA ++E W++K S ++F+ ++G+ V+P DVFLAFTVDQG NVVNA L+V V+ CNAHRL +V W LGI G+ +T +NP + K MK+LAA VG FSHSAVNN ELK I L F +YELIRRNDTRW +Q MM RLL+LK+ +VEYFR N N+ R+L+S +W VTN+VC++LD +AEV +K QG DT++SQ F M+E+ E+ + + +IRV D+P D V E++ +L +E E+ ME+K+LG A P ERI LDPR+K S++ + G L+ AI+DV+ + F
Sbjct: 227 MSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF 625
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 341 bits (874), Expect = 5.120e-106 Identity = 186/412 (45.15%), Postives = 268/412 (65.05%), Query Frame = 1
Query: 514 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR-------NSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRV----LDKP----GIDPVPYEQVNKS-------------ELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVE 1665
++A ++ +L L+ +++ ++ ++ R+ CL +G G F+ Q+DLTTVAG EY TF+ SY+ G+ + R+ LATRAFPGSHTA++++ W++ ++ ++ + L+G VE DVFLAFTVDQG NVVNA AL VPVV CN HR+ + V W LGIAG+ TCKN K MKKLAA VG FSHSAVNN LK + L ++YE IRRNDTRWT+Q+ MM RLL LK+P+ EYFRR N KR+LT+H+W VTN+VC++L+ ++EV I+ QG DT+LSQATF++ E+++++ ++ IRV + P GI P E N+S +L E + V++ EVM+EK +G+AL ER+SV LDPR+K + + G + L+T A +D++
Sbjct: 56 MAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLK 463
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 340 bits (871), Expect = 1.590e-105 Identity = 182/397 (45.84%), Postives = 258/397 (64.99%), Query Frame = 1
Query: 514 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR-------NSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRVLDKPGIDPVPYEQVNKSELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEELGHHF 1683
+++ ++ +L L+ V + ++ ++ R+ CL +G G F+ Q+DLTTVAG EY TF+ SY+ G+ + R+ LATRAFPGSHTA++++ W++ ++ ++F+ L+G VE DVFLAFTVDQG NVVNA AL VPVV CN HR+ + V W LGIAG+ TCKN K MKKLAA VG FSHSAVNN LK + L ++YE IRRNDTRWT+Q+ MM RLL LK+P+ EYFRR N KR+LT+H+W VTN+VC++L+ ++EV I+ QG +T+LSQATF++ E E N L D + E+ + L E + V++ RE+M+EK +G+AL ER+SV LDPR+K + + G + L+T A +D++ F
Sbjct: 56 MASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKN----KPMKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINE-GEGQNESSL----------DGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKF 437
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 342 bits (876), Expect = 2.730e-104 Identity = 174/386 (45.08%), Postives = 257/386 (66.58%), Query Frame = 1
Query: 514 LSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRVLDKPGIDPVPYEQVNKSELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEEL 1671
+S + +D L LY V+ +++ ++ R+ CL +G G F+ Q+DLTTVAG EY TF+ SY+ G + R+ LA RAFPG+HTA+++ W++++++++F+ +G+ VEP DVFLAFTVDQG NVVNA +AL VPVV CN HR+ T V W LGIAG + +N V+G MKKLAA VG FSHSAVNN +LK + L VY+LIRRNDTRWT+Q MM+RLL LK+P+ EYFR ++ R+LT +W +TN+VC++L ++EV I+ QG +DT++SQA F++ E+ME++ + IR + +P E++ EL S + +E+ +VMEEK +G+A+ ER+S +DPR+K + G L+ A D++ +
Sbjct: 245 MSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQN--ATEP---EEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAV 623
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 339 bits (869), Expect = 3.760e-103 Identity = 175/397 (44.08%), Postives = 259/397 (65.24%), Query Frame = 1
Query: 496 LTTPLELSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIR-----VLDKPGIDPVPYEQVNKSELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEEL 1671
+TT + S ++ L LYG V +++ E+ R+ L +G GPF+ Q+DLTT AG EY TF+ +++ G+ + RI LA RAFPGSHTA +++ W++K++ ++FS +G+ V+PSDVFLAFTVDQG N++NA AL V VV CN HRL T V W LGIAG + NP +G MKKLAA VG FSHSAVNN ELK + L FS++YEL+RRNDTRWT+Q MM+R+L LK+P+ EYF++ ++R+LT ++W +TN+VC++L ++EV I+ QG DT++ QA F++ EL+E++ + IR V+ P + +P + +L +E + +E+ +E M EK +G A ER+S +DPR+K + D G L+ A D++ +
Sbjct: 243 VTTTMAKST--FNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPP-EGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAV 634
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 333 bits (854), Expect = 5.840e-103 Identity = 173/397 (43.58%), Postives = 257/397 (64.74%), Query Frame = 1
Query: 496 LTTPLELSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVTIKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIR-----VLDKPGIDPVPYEQVNKSELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEEL 1671
+TT + S ++ L LYG V +++ E+ R+ L +G GPF+ Q+DLTT AG EY TF+ +++ G+ + RI LA RAFPGSHTA +++ W++K++ ++FS +G+ V+PSDVFLAFTVDQG N++NA AL V VV CN HRL T V W LGIAG + NP +G MKKLAA VG FSHSAVNN ELK + L FS++YEL+R NDTRWT+Q MM+R+L LK+P+ EYF++ ++R+LT ++W +TN+VC++L ++EV I+ QG DT++ QA F++ EL+E++ + IR V+ P + +P + +L +E + +E+ +E M EK +G A ER+S +DPR + + D G L+ A D++ +
Sbjct: 48 VTTTMAKST--FNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPP-EGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAV 439
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 278 bits (712), Expect = 3.400e-83 Identity = 149/337 (44.21%), Postives = 213/337 (63.20%), Query Frame = 1
Query: 475 FSWVFGILT---TPLELSAERYDDILLNLYGGVRETLLAEIHEHRDSCLALGCKGPFVSGQVDLTTVAGAEYKTFSASYIPPGEVT-IKRIGLATRAFPGSHTANNVEYWLKKISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSND-------KRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRVLDKPGIDPVP 1452
F G+L+ +++ ++ +L LY V++ ++ ++ R+ L +G G F+ +DLTTVA EY TF+ SY+ G+ + R+ LATRAFPGSHTA +++ W++ ++ ++F L+G V+P DVFL FTVDQG N+VNA AL VPVV CN HR+ + V W LGIAG +TCKN ++G MKKLAA VG FSHSAVNN LK I L +VYE WT+Q MM RLL L + + EYFRR + KR+LT+H+W VTN+VC++LD ++E I+ QG DT++SQATF++ E+ME++ + IRV + + P P
Sbjct: 36 FKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQRLEADLHRVYE--------WTSQFRMMVRLLILNKAINEYFRRLAQQNPQHKQLKRKLTAHEWTVTNEVCSLLDTVSEATIRMQGAADTHISQATFIVHEVMEMLKEDSHPIRV-ENAMVTPPP 363
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 275 bits (702), Expect = 3.930e-82 Identity = 145/296 (48.99%), Postives = 201/296 (67.91%), Query Frame = 1
Query: 799 KISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRVLDKP-GIDPVPYEQVNKSELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEELGHHF 1683
+++ ++F+ ++G+ V+P DVFLAFTVDQG NVVNA L+V V+ CNAHRL +V W LGI G+ +T +NP + K MK+LAA VG FSHSAVNN ELK I L F +YELIRRNDTRW +Q MM RLL+LK+ +VEYFR N N+ R+L+S +W VTN+VC++LD +AEV +K QG DT++SQ F M+E+ E+ + + +IRV D+P D V E++ +L +E E+ ME+K+LG A P ERI LDPR+K S++ + G L+ AI+DV+ + F
Sbjct: 2 QLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF 297
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 238 bits (608), Expect = 4.190e-68 Identity = 140/317 (44.16%), Postives = 197/317 (62.15%), Query Frame = 1
Query: 799 KISKQWFSKLVGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR------NSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRVLDK------PGIDPVPYEQ--------------VNKSELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEEL 1671
+++K++F +G+ VEPSDVFLAFTVDQG NVVNA AL V VV CN HR+ + V W LGIAG+ TC+N +G MKKLAA VG FS SAVNN LK + L ++YEL+RRNDT +Q MM RLL LK+P+ EYFRR N KR+L+SH+W VTN+VC++L ++E+ I+ QG +DT++SQA FL+ E+ME++ E IR + P +D +P E+ ++ +L +E + ++ EVMEEK +G+AL ER+S LDPR+K + G L+ A +D+++
Sbjct: 6 QLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNNM-LKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKF 318
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 228 bits (581), Expect = 4.000e-65 Identity = 124/287 (43.21%), Postives = 184/287 (64.11%), Query Frame = 1
Query: 829 VGDRVEPSDVFLAFTVDQGYNVVNAIEALNVPVVVCNAHRLITVVCWMLGIAGTDKTCKNPVLGKNMKKLAACVGKFSHSAVNNSELKTI*ELSPVFSKVYELIRRNDTRW-TTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCTILDPIAEVNIKTQGDEDTYLSQATFLMKELMEVMNSECLQIRVLDKPGIDPVPYEQVNK-----SELFSEVETAVEMYREVMEEKDLGRALNPTERISVFLDPRKKMISEDDCIAGGNALQTMAISDVEEL 1671
+G+ V PS+ FLAFTVDQG N++NA AL+V VV CN HR+ T V W LGIA + KNP +G MKKLAA VG FSHSAVNN ELK + L FS++YEL+RRNDTRW T+Q MM+R L LK+P+ E+F++ + R+LT ++W + N+VC++L ++E+ I+ QG DT++ QA F++ E++E++ + IR + + PVP E + ++L +E +E+ +VM +K +G A ER+S +DPR+K++ D G L A D++ +
Sbjct: 1 MGESVVPSNDFLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVV-PVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAV 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16440.4067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16440.4067.1 >prot_H-elongata_contig16440.4067.1 ID=prot_H-elongata_contig16440.4067.1|Name=mRNA_H-elongata_contig16440.4067.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp MTLASCFSWVFGILTTPLELSAERYDDILLNLYGGVRETLLAEIHEHRDSback to top mRNA from alignment at H-elongata_contig16440:1867..5122+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16440.4067.1 ID=mRNA_H-elongata_contig16440.4067.1|Name=mRNA_H-elongata_contig16440.4067.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3256bp|location=Sequence derived from alignment at H-elongata_contig16440:1867..5122+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16440:1867..5122+ >mRNA_H-elongata_contig16440.4067.1 ID=mRNA_H-elongata_contig16440.4067.1|Name=mRNA_H-elongata_contig16440.4067.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1290bp|location=Sequence derived from alignment at H-elongata_contig16440:1867..5122+ (Himanthalia elongata Himel1 dioecious)back to top |