mRNA_H-elongata_contig163793.4034.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: A0A6H5JR37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR37_9PHAE) HSP 1 Score: 230 bits (587), Expect = 8.430e-74 Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFRKMLSSR 374
FDAGYGSTHMARIVGQKKAREIWFLC +YSAKEAL MGLVNTVVPL ELE ET+KWCRRIV NSPTA+SCLKAALNADEDGQAG+MQLAGNATRLFYLSEEGKEGKNAFLEKRKP+FRK+L+S+
Sbjct: 180 FDAGYGSTHMARIVGQKKAREIWFLCRYYSAKEALDMGLVNTVVPLDELELETMKWCRRIVQNSPTAISCLKAALNADEDGQAGVMQLAGNATRLFYLSEEGKEGKNAFLEKRKPEFRKLLTSK 303
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: D7FHN2_ECTSI (Naphthoate synthase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN2_ECTSI) HSP 1 Score: 208 bits (529), Expect = 1.330e-67 Identity = 101/115 (87.83%), Postives = 109/115 (94.78%), Query Frame = 3
Query: 30 MARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFRKMLSSR 374
MARIVGQKKAREIWFLC +YSAKEAL MGLVNTVVPL LE ET+KWCRRIV NSPTA+SCLKAALNADEDGQAG+MQLAGNATRLFYLSEEGKEGKNAFLEKRKP+FRK+L+S+
Sbjct: 1 MARIVGQKKAREIWFLCRYYSAKEALDMGLVNTVVPLDALELETLKWCRRIVQNSPTAISCLKAALNADEDGQAGVMQLAGNATRLFYLSEEGKEGKNAFLEKRKPEFRKLLTSK 115
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: A0A7S4DGT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGT8_HETAK) HSP 1 Score: 209 bits (533), Expect = 1.270e-65 Identity = 99/124 (79.84%), Postives = 115/124 (92.74%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFRKMLSSR 374
FDAGYGS+HMARIVGQKKAREIWFLC +Y+A+EAL MGLVNTVVPL ELE E+++WCRRI+ NSPTA++CLKAALNADEDGQAG MQLAGNATRLFYLSEEGKEG++AF++KR P FRK+ SS+
Sbjct: 180 FDAGYGSSHMARIVGQKKAREIWFLCRYYTAQEALDMGLVNTVVPLHELEGESLRWCRRIMQNSPTAIACLKAALNADEDGQAGSMQLAGNATRLFYLSEEGKEGRDAFMQKRPPAFRKLPSSK 303
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: W7TL55_9STRA (Naphthoate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL55_9STRA) HSP 1 Score: 208 bits (529), Expect = 9.650e-65 Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFR 356
FDAGYGS+HMAR+VGQKKAREIWFLC FYSA EA MGLVNTVVPLA LE ET+KWCRRI+ NSPTA++C KAALNADEDG AGIM+LAGNATRLFYLSEEGKEG+NAFL+KRKP FR
Sbjct: 179 FDAGYGSSHMARLVGQKKAREIWFLCRFYSAHEAQDMGLVNTVVPLASLEGETLKWCRRIMENSPTAIACCKAALNADEDGAAGIMELAGNATRLFYLSEEGKEGRNAFLQKRKPAFR 296
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: L1JM70_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JM70_GUITC) HSP 1 Score: 204 bits (520), Expect = 1.110e-63 Identity = 97/124 (78.23%), Postives = 114/124 (91.94%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFRKMLSSR 374
FDAGYGS+HMARIVGQKKAREIWFLC Y+AKEAL M LVN+VVPLAELE+ET++WCRRI++ SPTAL+CLKAA+NADEDGQAGIM+LAG ATRL+YLSEEGKEG+NAF+++R P FR + SSR
Sbjct: 178 FDAGYGSSHMARIVGQKKAREIWFLCRLYNAKEALEMKLVNSVVPLAELERETLRWCRRILALSPTALACLKAAINADEDGQAGIMELAGQATRLYYLSEEGKEGRNAFVQRRPPAFRSIPSSR 301
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: A0A835ZE17_9STRA (Putative naphthoate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE17_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.810e-63 Identity = 100/124 (80.65%), Postives = 112/124 (90.32%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFRKMLSSR 374
FDAGYGS+HMARIVGQKKAREIWFL FYSA+EAL MGLVN VVPLA+LE ET+KWCRRI+ NSPTA+SCLKAALNADEDGQAG MQLAGNATRLFYLSEEGKEG++AFL KR +FR + +S+
Sbjct: 171 FDAGYGSSHMARIVGQKKAREIWFLSRFYSAQEALDMGLVNKVVPLAQLEGETMKWCRRIMENSPTAISCLKAALNADEDGQAGSMQLAGNATRLFYLSEEGKEGRDAFLAKRPARFRAVPTSK 294
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: A0A7S1UL01_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UL01_9STRA) HSP 1 Score: 200 bits (509), Expect = 4.540e-62 Identity = 95/124 (76.61%), Postives = 111/124 (89.52%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFRKMLSSR 374
FDAGYGS+HMARIVGQKKAREIWFLC+FY A+EAL MGLVNTVVP+ LE+ T+KW RRI+ NSPTAL+CLKAALNADEDG AG+M+LAGNATRL+Y+SEE KEGK AFL K+ PQFRK+ +S+
Sbjct: 174 FDAGYGSSHMARIVGQKKAREIWFLCNFYGAQEALDMGLVNTVVPVDMLERTTLKWARRIMQNSPTALACLKAALNADEDGAAGVMELAGNATRLYYMSEEAKEGKRAFLRKQAPQFRKIPTSK 297
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: A0A7S0YTF3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YTF3_9CRYP) HSP 1 Score: 199 bits (507), Expect = 1.050e-61 Identity = 97/124 (78.23%), Postives = 111/124 (89.52%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQFRKMLSSR 374
FDAGYGS HMARIVGQKKAREIWFLC Y+AKEAL M LVNTVVPLA+LE ET++WCRRI+ SPTA++CLKAA+NADEDGQAGIM+LAG ATRLFYLSEEGKEG++A+ +KRK FR +LSSR
Sbjct: 179 FDAGYGSGHMARIVGQKKAREIWFLCRLYTAKEALDMKLVNTVVPLAQLEGETLRWCRRIMQLSPTAIACLKAAMNADEDGQAGIMELAGLATRLFYLSEEGKEGRDAYNQKRKVDFRSVLSSR 302
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: A0A1V5YYW7_9BACT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YYW7_9BACT) HSP 1 Score: 192 bits (489), Expect = 2.460e-59 Identity = 90/117 (76.92%), Postives = 105/117 (89.74%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQF 353
FDAGYGS H+AR+VGQKKAREIWFLC Y+A++AL MGLVNTVVPLAELE+ET++WCR I+ NSPTAL +KAA+NADEDGQAG+M+LAGNAT LFY SEEG+EG+NAFLEKR P F
Sbjct: 152 FDAGYGSAHLARMVGQKKAREIWFLCRQYNAQQALEMGLVNTVVPLAELEKETVQWCREIMRNSPTALRFIKAAMNADEDGQAGLMELAGNATSLFYRSEEGQEGRNAFLEKRDPDF 268
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Match: A0A1V6F4J9_9BACT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6F4J9_9BACT) HSP 1 Score: 191 bits (486), Expect = 6.800e-59 Identity = 87/117 (74.36%), Postives = 104/117 (88.89%), Query Frame = 3
Query: 3 FDAGYGSTHMARIVGQKKAREIWFLCSFYSAKEALHMGLVNTVVPLAELEQETIKWCRRIVSNSPTALSCLKAALNADEDGQAGIMQLAGNATRLFYLSEEGKEGKNAFLEKRKPQF 353
FDAGYGS H+AR+VGQKKAREIWFLC Y+A++AL MG+VNTVVPL LE ET+ WCR I++NSPTAL C+KAA+NADEDGQAG+M+LAGNAT LFY++EEG+EG+NAFLEKR P F
Sbjct: 151 FDAGYGSAHLARMVGQKKAREIWFLCRQYTAQQALEMGMVNTVVPLERLEAETVAWCREILANSPTALRCIKAAMNADEDGQAGLMELAGNATGLFYMTEEGQEGRNAFLEKRPPDF 267 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163793.4034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig163793.4034.1 >prot_H-elongata_contig163793.4034.1 ID=prot_H-elongata_contig163793.4034.1|Name=mRNA_H-elongata_contig163793.4034.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp ASTLATARHTWRALLVRRRRERFGFSVLSTLPRRLYTWVLSTPSSHLQSSback to top mRNA from alignment at H-elongata_contig163793:411..1401- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig163793.4034.1 ID=mRNA_H-elongata_contig163793.4034.1|Name=mRNA_H-elongata_contig163793.4034.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=991bp|location=Sequence derived from alignment at H-elongata_contig163793:411..1401- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig163793:411..1401- >mRNA_H-elongata_contig163793.4034.1 ID=mRNA_H-elongata_contig163793.4034.1|Name=mRNA_H-elongata_contig163793.4034.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig163793:411..1401- (Himanthalia elongata Himel1 dioecious)back to top |