prot_H-elongata_contig16329.4011.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig16329.4011.1
Unique Name	prot_H-elongata_contig16329.4011.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	99

Homology

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: D7FKE1_ECTSI (AP-1 complex subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE1_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.440e-53
Identity = 95/99 (95.96%), Postives = 98/99 (98.99%), Query Frame = 0

Query:    1 QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDLNSHSSPAQ 99
            QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISST+YSEKNVGY+AVSLLLRSGD MM+LVINSIRNDLNSHSSPAQ
Sbjct:   40 QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTKYSEKNVGYVAVSLLLRSGDTMMSLVINSIRNDLNSHSSPAQ 138

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A6H5L7E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E0_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 7.530e-52
Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 0

Query:    1 QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDLNSHSSPAQ 99
            QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLI+ST+YSEKNVGY+AVSLLLRSGD MM+LVINSIRNDLNSHSSPAQ
Sbjct:   40 QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLINSTKYSEKNVGYVAVSLLLRSGDTMMSLVINSIRNDLNSHSSPAQ 138

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A836C8G3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G3_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.790e-43
Identity = 79/99 (79.80%), Postives = 91/99 (91.92%), Query Frame = 0

Query:    1 QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDLNSHSSPAQ 99
            Q RVDKELAN+R KFSS+ GL+SY +KKYVWKLVY++MLGYE++FGHMEMISLISS ++SEK VGYIAVSLLLRSGD MMTLVINS+RNDL SHS+PAQ
Sbjct:   64 QARVDKELANVRAKFSSTGGLTSYRKKKYVWKLVYIYMLGYEVEFGHMEMISLISSPKHSEKAVGYIAVSLLLRSGDEMMTLVINSMRNDLQSHSNPAQ 162

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A7S3YMV4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YMV4_HETAK)

HSP 1 Score: 138 bits (348), Expect = 2.270e-39
Identity = 65/89 (73.03%), Postives = 81/89 (91.01%), Query Frame = 0

Query:    3 RVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDL 91
            RVD ELA IRNKF+ S G+ +Y+++KYVWKLVY++MLGYE+DFGHME+ISLI+S++Y EK VGY+A+SLLL+SGD MMTLVINSIRNDL
Sbjct:   26 RVDIELAKIRNKFAGSGGMGAYSKRKYVWKLVYIYMLGYEVDFGHMEVISLITSSKYQEKTVGYVAMSLLLKSGDEMMTLVINSIRNDL 114

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A7S1BCA8_9STRA (AP-2 complex subunit alpha n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCA8_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.750e-36
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    2 QRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDL 91
            QRVDKELANIR KF+ SS LSSY RKKYVWKLVY+FMLGY++DFGH E+I+L++S +YSEK VGY+A+SLLL+ GD M++LVINSIRNDL
Sbjct:   27 QRVDKELANIRKKFTGSSSLSSYQRKKYVWKLVYIFMLGYDVDFGHSEVITLVASGKYSEKQVGYVALSLLLKGGDQMLSLVINSIRNDL 116

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: W7TFV9_9STRA (AP-2 complex subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFV9_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.260e-36
Identity = 67/96 (69.79%), Postives = 86/96 (89.58%), Query Frame = 0

Query:    1 QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDLNSHSS 96
            Q R+DKELANIR+KFSS + LS Y RKKYVWKLVY+F LGYE+DFGHME+I+LISS ++SEK+VGY+AVSLL+++ + MMTLV+NS+RNDL SH++
Sbjct:   87 QMRIDKELANIRHKFSSPATLSPYQRKKYVWKLVYIFTLGYEVDFGHMEIIALISSGKFSEKSVGYVAVSLLMKADNEMMTLVVNSVRNDLLSHNN 182

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A7S2PPT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPT4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.420e-36
Identity = 64/94 (68.09%), Postives = 82/94 (87.23%), Query Frame = 0

Query:    3 RVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDLNSHSS 96
            RVDKELANIR KF  SS LSSY RKKYVWKLVY+ +LGY++DFGH E++SL+SS+++SEK VGY+A+SLLLR GD M++LV+N+IRNDL + S+
Sbjct:   27 RVDKELANIRKKFLGSS-LSSYQRKKYVWKLVYIHVLGYDVDFGHSEVVSLVSSSKFSEKQVGYVALSLLLRGGDQMLSLVVNAIRNDLTTSSN 119

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A7S3M320_9STRA (AP-2 complex subunit alpha n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M320_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.520e-34
Identity = 63/89 (70.79%), Postives = 80/89 (89.89%), Query Frame = 0

Query:    3 RVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDL 91
            RVDKELANIR KF++SS LSS ++KKYVWK+ YM+MLGY+IDFGH+E ISL+SST++ EK+VGY+A SL+LR GD +MTLV+NS+RNDL
Sbjct:   63 RVDKELANIRQKFANSSSLSSRDKKKYVWKMCYMYMLGYDIDFGHLEFISLLSSTKFQEKSVGYMAFSLMLRPGDELMTLVVNSMRNDL 151

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A482T160_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T160_9ARCH)

HSP 1 Score: 132 bits (333), Expect = 6.380e-34
Identity = 61/97 (62.89%), Postives = 82/97 (84.54%), Query Frame = 0

Query:    3 RVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDLNSHSSPAQ 99
            RVDKELANIRNKF++S+ L+SY++KKYVWKL Y++MLGYE+DFGH+E ISL+SST+Y+EK VGY+A S++ R GD +M L +NS+RND+  H+   Q
Sbjct:   33 RVDKELANIRNKFATSANLTSYDKKKYVWKLCYIYMLGYEVDFGHVEFISLLSSTKYTEKAVGYMAFSMMFRPGDELMALAVNSMRNDVIGHAHHGQ 129

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BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Match: A0A7R9UPL6_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UPL6_DIALT)

HSP 1 Score: 132 bits (332), Expect = 6.470e-34
Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 0

Query:    1 QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEMISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDL 91
            Q+R+DKE+ANIR KF+    L+ Y RKKYVWK++YMFMLGYEIDFGHME + LISS RYSEK VGY+A SLLLR GD ++ L+INSI+NDL
Sbjct:   40 QKRIDKEMANIRQKFAKPQDLNGYQRKKYVWKILYMFMLGYEIDFGHMESVGLISSPRYSEKMVGYMACSLLLREGDDLLRLIINSIKNDL 130

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot

BLAST of mRNA_H-elongata_contig16329.4011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKE1_ECTSI	3.440e-53	95.96	AP-1 complex subunit gamma n=1 Tax=Ectocarpus sili...	[more]
A0A6H5L7E0_9PHAE	7.530e-52	94.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836C8G3_9STRA	3.790e-43	79.80	AP-1 complex subunit gamma n=1 Tax=Tribonema minus...	[more]
A0A7S3YMV4_HETAK	2.270e-39	73.03	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S1BCA8_9STRA	1.750e-36	74.44	AP-2 complex subunit alpha n=1 Tax=Corethron hystr...	[more]
W7TFV9_9STRA	3.260e-36	69.79	AP-2 complex subunit alpha n=2 Tax=Monodopsidaceae...	[more]
A0A7S2PPT4_9STRA	5.420e-36	68.09	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
A0A7S3M320_9STRA	2.520e-34	70.79	AP-2 complex subunit alpha n=1 Tax=Spumella elonga...	[more]
A0A482T160_9ARCH	6.380e-34	62.89	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A7R9UPL6_DIALT	6.470e-34	69.23	Hypothetical protein (Fragment) n=2 Tax=Diacronema...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..99 e-value: 1.1E-37 score: 131.7
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 2..95 e-value: 5.2E-22 score: 78.1
None	No IPR available	PANTHER	PTHR22780:SF4	AP-2 COMPLEX SUBUNIT ALPHA	coord: 1..96
None	No IPR available	PANTHER	PTHR22780	ADAPTIN, ALPHA/GAMMA/EPSILON	coord: 1..96
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 3..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig16329	contig	H-elongata_contig16329:4197..7325 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig16329.4011.1	mRNA_H-elongata_contig16329.4011.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig16329 4197..7325 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig16329.4011.1 ID=prot_H-elongata_contig16329.4011.1|Name=mRNA_H-elongata_contig16329.4011.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
QQRVDKELANIRNKFSSSSGLSSYNRKKYVWKLVYMFMLGYEIDFGHMEM
ISLISSTRYSEKNVGYIAVSLLLRSGDHMMTLVINSIRNDLNSHSSPAQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR002553	Clathrin/coatomer_adapt-like_N
IPR016024	ARM-type_fold