prot_H-elongata_contig163215.4009.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig163215.4009.1
Unique Nameprot_H-elongata_contig163215.4009.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
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BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: D8LM70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM70_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.480e-17
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:    6 QVAKRAGVKIPTACKTGICGTCTTDLEDPNAESYRPGFQVVRACVT 51
            +VAKR GVKI TAC +GICGTC TDLED N +SYRPGFQVVRACVT
Sbjct:   64 KVAKRCGVKIATACNSGICGTCMTDLEDANGKSYRPGFQVVRACVT 109
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A835YHE6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHE6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.980e-14
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    7 VAKRAGVKIPTACKTGICGTCTTDLEDPN---AESYRPGFQVVRACV 50
            VA RAG+KI T+C++G+CGTCTTD+EDPN    ++YRPGFQ +RACV
Sbjct: 2230 VAARAGIKIATSCRSGLCGTCTTDMEDPNWPLNKTYRPGFQTIRACV 2276
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A7S1BMG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMG3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.310e-11
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPNAESY-RPGFQVVRAC 49
            L+V    G+K+P AC+TG+CGTCT D++DP AE   RPG+ VVRAC
Sbjct:   33 LKVGDDHGIKVPRACRTGLCGTCTVDVKDPGAEGKERPGYSVVRAC 78
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A7S1XP04_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP04_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.210e-9
Identity = 29/47 (61.70%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPNAESYRPGFQVVRACVT 51
            + V  R GVKIP  CKTGICGTCT DL DPN   Y    Q VRAC T
Sbjct:   56 MDVGDRVGVKIPRGCKTGICGTCTLDLIDPN---YEGTLQTVRACCT 99
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A7S1TWY9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWY9_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9
Identity = 29/47 (61.70%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPNAESYRPGFQVVRACVT 51
            + V  R GVKIP  CKTGICGTCT DL DPN   Y    Q VRAC T
Sbjct:   56 MDVGDRVGVKIPRGCKTGICGTCTLDLIDPN---YEGTLQTVRACCT 99
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A7R9U3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3B9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.250e-9
Identity = 28/47 (59.57%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPNAESYRPGFQVVRACVT 51
            + V    GVKIP  CKTG+CGTCT DL DPN E  R   Q VRAC T
Sbjct:   44 MDVGDAVGVKIPRGCKTGVCGTCTLDLLDPNFEGQR---QTVRACCT 87
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: W7TBD5_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBD5_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.340e-8
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPN--------AESYRPGFQVVRACVT 51
            ++V  +AG+ IP AC TG+CGTCT+DL DP+            R G+Q +RAC T
Sbjct:  118 MKVGDKAGISIPRACCTGLCGTCTSDLRDPSYTFKGEDKPAGAREGYQTIRACST 172
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A4D9CZD2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZD2_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.970e-8
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPN--------AESYRPGFQVVRACVT 51
            ++V  +AG+ IP AC TG+CGTCT+DL DP+            R G+Q +RAC T
Sbjct:  118 MKVGDKAGISIPRACCTGLCGTCTSDLRDPSYTFKGEDKPAGAREGYQTIRACST 172
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A7S3A412_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A412_9RHOD)

HSP 1 Score: 54.3 bits (129), Expect = 1.030e-7
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPNAESYRPGFQVVRACVT 51
            +++     +KIP  C+TG+CG CT DLEDP   S+  G Q +RAC T
Sbjct:    6 MKLGDSVDIKIPRGCRTGLCGACTVDLEDP---SFPDGIQTIRACQT 49
[Close]
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Match: A0A7S3A5G6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5G6_9RHOD)

HSP 1 Score: 54.3 bits (129), Expect = 2.050e-7
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:    5 LQVAKRAGVKIPTACKTGICGTCTTDLEDPNAESYRPGFQVVRACVT 51
            +++     +KIP  C+TG+CG CT DLEDP   S+  G Q +RAC T
Sbjct:  129 MKLGDSVDIKIPRGCRTGLCGACTVDLEDP---SFPDGIQTIRACQT 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163215.4009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LM70_ECTSI1.480e-1780.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YHE6_9STRA2.980e-1465.962Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1BMG3_9STRA7.310e-1158.70Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S1XP04_9STRA1.210e-961.70Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1TWY9_9STRA1.220e-961.70Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A7R9U3B9_9STRA4.250e-959.57Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W7TBD5_9STRA1.340e-845.452Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9CZD2_9STRA2.970e-845.452Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S3A412_9RHOD1.030e-746.81Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A5G6_9RHOD2.050e-746.81Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 3..48
e-value: 4.9E-8
score: 34.5
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 5..51
e-value: 5.3E-8
score: 32.7
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 1..51
score: 9.153
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 19..27
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 5..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig163215contigH-elongata_contig163215:315..467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig163215.4009.1mRNA_H-elongata_contig163215.4009.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig163215 315..467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig163215.4009.1 ID=prot_H-elongata_contig163215.4009.1|Name=mRNA_H-elongata_contig163215.4009.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MSPSLQVAKRAGVKIPTACKTGICGTCTTDLEDPNAESYRPGFQVVRACV
T
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf