prot_H-elongata_contig162181.3955.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162181.3955.1
Unique Nameprot_H-elongata_contig162181.3955.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length54
Homology
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BLAST of mRNA_H-elongata_contig162181.3955.1 vs. uniprot
Match: UPI001F045B79 (transient receptor potential cation channel subfamily A member 1 homolog isoform X1 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F045B79)

HSP 1 Score: 52.0 bits (123), Expect = 2.560e-6
Identity = 22/47 (46.81%), Postives = 33/47 (70.21%), Query Frame = 0 
Query:    8 LDESDEQDGTPLHYAAKKGFVRLAKMLLGAGATVDVLNVKNMTPLHL 54
            L+ES++   TPLH AAKKGF+ + ++LL  GA ++  N++  T LHL
Sbjct:  476 LEESNKYGNTPLHIAAKKGFINVVRLLLSNGAVINAFNLEERTALHL 522
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BLAST of mRNA_H-elongata_contig162181.3955.1 vs. uniprot
Match: A0A179FAK8_METCM (SesB protein n=1 Tax=Pochonia chlamydosporia 170 TaxID=1380566 RepID=A0A179FAK8_METCM)

HSP 1 Score: 48.5 bits (114), Expect = 4.310e-5
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0 
Query:   10 ESDEQDGTPLHYAAKKGFVRLAKMLLGAGATVDVLNVKNMTPLH 53
            + D++  TPLH AA+ GF+ + K LL AGA VD  N  N TPLH
Sbjct: 1503 KQDDKGRTPLHEAARAGFLDVVKTLLSAGAEVDAPNHSNNTPLH 1546
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162181.3955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001F045B792.560e-646.81transient receptor potential cation channel subfam... [more]
A0A179FAK8_METCM4.310e-552.27SesB protein n=1 Tax=Pochonia chlamydosporia 170 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 14..43
e-value: 0.0032
score: 26.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 14..46
score: 12.075
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..54
e-value: 2.8E-12
score: 48.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 8..53
NoneNo IPR availablePFAMPF13637Ank_4coord: 9..35
e-value: 5.0E-5
score: 23.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 14..54
score: 16.441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162181contigH-elongata_contig162181:938..1099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162181.3955.1mRNA_H-elongata_contig162181.3955.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162181 938..1099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162181.3955.1 ID=prot_H-elongata_contig162181.3955.1|Name=mRNA_H-elongata_contig162181.3955.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bp
TVILQVALDESDEQDGTPLHYAAKKGFVRLAKMLLGAGATVDVLNVKNMT
PLHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom