mRNA_H-elongata_contig16065.3885.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: D8LHK0_ECTSI (6-pyruvoyltetrahydropterin synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK0_ECTSI) HSP 1 Score: 188 bits (478), Expect = 2.970e-59 Identity = 90/111 (81.08%), Postives = 95/111 (85.59%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPEENTTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLVGEE 333
MHGATYTVDAEFKTDALVEKSNWVVDIGAASEML++VLSKYNFKNLNE+FP +NTTTEFMCKV IFDE+ AKCG FHGTLCIKLWESHKAW CYEG VGEE
Sbjct: 58 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKV----------IFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDVGEE 158
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: A0A7S4DL62_HETAK (6-pyruvoyltetrahydropterin synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL62_HETAK) HSP 1 Score: 142 bits (357), Expect = 5.160e-41 Identity = 70/108 (64.81%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPEENTTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLV 324
MHGATYTVD EF+ + LV+K NWVVDIG ASE+LS+VL KYNFKNLNELFP++NTTTEFMCK IFD+I A C + F G++C+KL ESHKAWA Y G V
Sbjct: 54 MHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKA----------IFDDIAA-CLENFKGSMCVKLHESHKAWASYTGDV 150
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: A0A7S2V5M2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5M2_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.570e-39 Identity = 64/105 (60.95%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPEENTTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYE 315
+HGATYTVD EF D L K NWV+DIG ASE+L VL+KYNFKNL+ELFP++NTTTEFMCKV IFD++ A+ + F G+L +KLWESHKAWA Y+
Sbjct: 55 LHGATYTVDVEFMADVLESKCNWVIDIGLASEILGKVLAKYNFKNLDELFPDDNTTTEFMCKV----------IFDDMSAELANKFKGSLSVKLWESHKAWASYQ 149
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: A0A836CJP8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP8_9STRA) HSP 1 Score: 134 bits (337), Expect = 4.050e-38 Identity = 64/110 (58.18%), Postives = 74/110 (67.27%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPEENTTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLVGE 330
MHGATYT D EF L NWV+DIG AS MLS VL++YNFKNLNE+FP+ENTTTEFMC+ IFD + C F GT+ +KLWESHKAWA YEG V +
Sbjct: 35 MHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRR----------IFDGVARACAGRFCGTIRVKLWESHKAWASYEGAVAD 134
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: W7T312_9STRA (6-pyruvoyltetrahydropterin synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T312_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.800e-36 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPE-ENTTTEFMCK-VH-SLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLV 324
+HGATYTVD F++ LV K+NWV+DIG AS LS +LSKYNFKNL+++FPE ENTTTEFMC+ +H L FC + F G++C+KLWESHKAWACYE +V
Sbjct: 58 IHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFC----TNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: L1J9Q7_GUITC (6-pyruvoyltetrahydropterin synthase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J9Q7_GUITC) HSP 1 Score: 122 bits (307), Expect = 6.200e-33 Identity = 58/111 (52.25%), Postives = 71/111 (63.96%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPEENTTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLVGEE 333
MHGATYTVD EF ++L + NWV+DIG ML VL +YNFKNLNELFP ENTTTEFMCK IF+ + + F G++ +KLWESH AWA Y +G +
Sbjct: 88 MHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFPGENTTTEFMCKK----------IFEGLCVELKGKFKGSITVKLWESHSAWASYTNDIGAD 188
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: B7FYC8_PHATC (6-pyruvoyltetrahydropterin synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYC8_PHATC) HSP 1 Score: 120 bits (302), Expect = 1.400e-32 Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPE-ENTTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLV 324
MHGATYT D EF D L +NWV+DIG ASE+L +VL+KYN KNL+E+FP + TTTEFMCK + + +++ + FHG +C+KLWESHKAWA Y G+V
Sbjct: 54 MHGATYTCDVEFSKDTLDPDTNWVMDIGKASELLCTVLAKYNLKNLDEVFPNGQLTTTEFMCKQIHMDLV-------DLIRREFHDFHGEVCVKLWESHKAWAAYSGVV 155
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: A0A7R9WRW2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRW2_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.500e-31 Identity = 59/112 (52.68%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPEEN-TTTEFMCKVHSLTTLFCFVIFDEIVAK----CGDAFHGTLCIKLWESHKAWACYEGL 321
MHGATYT D EF+TD+L ++NWV+DIG ASE++S VL +YN +NL+E+FP++ TTTEFM + I D+I A+ C D F G +C+KLWESHKAWA Y G+
Sbjct: 63 MHGATYTCDVEFQTDSLHPETNWVIDIGKASEIVSDVLKRYNLQNLDEVFPDKTMTTTEFMARQ----------IHDDIQARLATDCAD-FQGQVCVKLWESHKAWASYTGM 163
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: A0A7S2R056_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R056_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.900e-30 Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPEEN-TTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLV 324
MHGATYT D EF + L +NWV+DIG AS++LS +L+KYN KNL+E+F ++ TTTEFMC+ C I +++ + D FHG LC+KLWESHKAWA Y+ +
Sbjct: 35 MHGATYTCDVEFACEELDSDANWVIDIGKASDILSEILAKYNLKNLDEIFGDDILTTTEFMCRE------ICQGIAEKVREQVPD-FHGDLCVKLWESHKAWASYQQSI 136
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Match: A0A7S2A892_TRICV (6-pyruvoyltetrahydropterin synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A892_TRICV) HSP 1 Score: 114 bits (284), Expect = 1.600e-29 Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 1 MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFPE-ENTTTEFMCKVHSLTTLFCFVIFDEIVAKCGDAFHGTLCIKLWESHKAWACYEGLV 324
MHGATYT D EF+T L + NWV+DIG AS++L+SVLS+YN KNL+E+FP+ E TTTEFMC+V + C + +E G F G + +KLWESHKAW Y G V
Sbjct: 84 MHGATYTCDVEFRTSHLHPECNWVIDIGLASDVLTSVLSRYNMKNLDEVFPDGEMTTTEFMCRV--IHEDLCRRLKEE-----GAEFEGEIRVKLWESHKAWGSYVGEV 185 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16065.3885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16065.3885.1 >prot_H-elongata_contig16065.3885.1 ID=prot_H-elongata_contig16065.3885.1|Name=mRNA_H-elongata_contig16065.3885.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp MHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLSSVLSKYNFKNLNELFback to top mRNA from alignment at H-elongata_contig16065:6412..7028- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16065.3885.1 ID=mRNA_H-elongata_contig16065.3885.1|Name=mRNA_H-elongata_contig16065.3885.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=617bp|location=Sequence derived from alignment at H-elongata_contig16065:6412..7028- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16065:6412..7028- >mRNA_H-elongata_contig16065.3885.1 ID=mRNA_H-elongata_contig16065.3885.1|Name=mRNA_H-elongata_contig16065.3885.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig16065:6412..7028- (Himanthalia elongata Himel1 dioecious)back to top |