prot_H-elongata_contig160640.3883.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig160640.3883.1
Unique Nameprot_H-elongata_contig160640.3883.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160640.3883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 60..82
e-value: 0.62
score: 19.1
coord: 13..36
e-value: 50.0
score: 7.5
coord: 83..106
e-value: 0.033
score: 23.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 15..73
e-value: 3.6E-10
score: 39.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 15..36
score: 5.972
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 85..106
score: 7.204
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 62..83
score: 7.427
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..134
e-value: 1.0E-30
score: 108.3
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 7..119
NoneNo IPR availablePANTHERPTHR16083:SF20LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40coord: 7..119
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 5..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig160640contigH-elongata_contig160640:1..908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig160640.3883.1mRNA_H-elongata_contig160640.3883.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig160640 1..908 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig160640.3883.1 ID=prot_H-elongata_contig160640.3883.1|Name=mRNA_H-elongata_contig160640.3883.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MVTPTPPHQVGRCENLMVLDLRGTALTSLPPELAQCKALNFLHVGRNKIT
GFGRELCEGLVNLEELYLYRNKIETLPLEVGCLSKLVKLSLSGNNIKGIP
AEIGACVHLAELYINNNQKVPAFSIGNISTLGSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf