mRNA_H-elongata_contig16055.3881.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16055.3881.1 vs. uniprot
Match: D7FQV8_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV8_ECTSI) HSP 1 Score: 382 bits (982), Expect = 1.000e-117 Identity = 263/711 (36.99%), Postives = 343/711 (48.24%), Query Frame = 1
Query: 1 RRTAVLFVIVAVSVACSGAKLPLLRNSTAEEWLAYIAKGLNLDLLGRHFEEVGSAILCTSAVTFTTLLMYPLNVWAS--------SLPSASSRNDRPYIFVGMGTVALIWGITLWASGRFHWGVASGLIVALQSTSLTMKLVSFFQACRSEC------------------MVDDRPRGDGGMDESCNDQVRPTPGRGGAQGEDRSN---------DACG------LSFGEFTFFLVLAPSLVCHPSQLRKCSRRLPNILRGASEFLHAALVFLAVHTTCSAFYAPVNRVLASTVHSG----WSDANSWIDVSAWEVLKVEGNGDWLHNVA-------LTAGGAWLGE-----EDLDNKNGGRANVDVIVIAAAWLGMFVLSPMQHFLMFYGFWHCVCLGSAEVWGYPDRNIYGPWWLVMDDIRVYFRMWSAPVSHWLAASVQRPMLEAGRQAA--GRRASVA-------------GGR------RVRGSGGSCGG------DGTILWRWWFASVVCSFLVSGLLHEAVGFVALRQTVWPFNTMFLAMSAIITPWWDLLFPAVRARSASESTPNXXXXXXXXXXXXXXXXXXXXXXXXXRNA---------------DKAVNKGQPHIHLFSATREAPRGTPGAPPGRLCSTGAGETISDGDLGSGTAMSRPAIGIYRGWFAVVFYFAASLPMTLMVDYLLWQWWRQTVMVR 1836
+RT+ L V+VA+S+A SGA +S+AE W Y+AKG++L LL +HF + SA+ C T T+ L+YP+ S +LP + +W WG+ASGL V LQ +LT+K VSF Q R + ++ GD S + P R Q + RSN D C L+F EF FFLVLAPSLVC P L+ +RR P + ASEFLHA L ++AVH CSA +AP RVLA +HSG W+D W E+ + +G+G WLH+ + + GG+ +G + G + + V AA LG+FV SPM HFLMFY F+H VCLG AE++GYPDRN YGPWWLV+DD+R YFR+WSAPV WL+ SVQRPM+E G++ A RR VA GG R +G+ + GG D I+ RWW ASVVCSFLVSG++HEAVGFVA+R+TVWPF+T FLA++A + P+WD LFP V S + P +A A G P G+ S+ RP IG RGW AVV Y +P+TL+VDY +WQWWR T M
Sbjct: 36 QRTSALLVVVAMSIAASGADGSGGSSSSAE-WGVYLAKGMHLALLQKHFGGMVSALGCMVMGTVTSFLVYPIYQRCSPAAIQNPRALPCRRVSSTTAKTIAAAVPSMAVWXXXXXXXXXXXWGIASGLCVGLQCAALTLKSVSFVQKARPVAAEAAIAVAAAHEDLDAAGVAENADEGDRAAAASGKLAISPAR-RSVLQRDPRSNSPSSTANGDDGCAHAANPALTFREFAFFLVLAPSLVCRPQYLKSGARRPPRVAAAASEFLHAGLTYVAVHVACSALFAPALRVLAEALHSGGVAGWADEEDWA-----ELRRTDGSGWWLHDSSRSIGSLFASGGGSCVGGGVGCVPGWTFADDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVGQREALRHRRRRVAREEDKPPATNGNSGGSNGVHDYRPKGTSSTTGGKARHGADAGIVTRWWLASVVCSFLVSGVVHEAVGFVAMRRTVWPFSTFFLAVTASMAPFWDTLFPVVADTSTPGTRPTGRRAFTSIAAAGGDGVGFSAETEAANSAAVPRTAXXXXXXXXXXXXXXXXXXXXXXXXAADGQHAGHPSKDVANKNGVVTGQQGSEAPRLGRKEPLRPKIGRRRGWAAVVVYGGMYMPLTLVVDYCVWQWWRHTHMAE 739
BLAST of mRNA_H-elongata_contig16055.3881.1 vs. uniprot
Match: A0A6H5J9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L7_9PHAE) HSP 1 Score: 299 bits (765), Expect = 1.040e-85 Identity = 234/758 (30.87%), Postives = 319/758 (42.08%), Query Frame = 1
Query: 4 RTAVLFVIVAVSVACSGAKLPLLRNSTA------EEWLAYIAKGLNLDLLGRHFEEVGSAILCTSAVTFTTLLMYPLNVWASSLPSA--------------------------SSRNDRPYI-----FVGMGTVALIWGITLWASGRFHWGVASGLIVALQSTSLTMKLVSFFQA-CRSECMVDDRPRGDGGMDESCNDQVRPTPGRGGAQGED--RSNDACG---LSFGEFTFFLVLAPSLVCHPSQLRKCSRRLPNILRGASEFLHAALVFLAVHTTCSAFYAPVNRVLASTVHS--------------------GWSDANS------------------WIDVSAW---EVLKVEG-NGDWLHNVALTAGGAWLGE----EDLDNKNGGRANVDV--IVIAAAWLGMFVLSPMQHFLMFYGFWHCVCLGSAEVWGYPDRNIYGPWWLVMDDIRVYFRMWSAPVSHWLAASVQRPMLEAGRQAAGRRASVAGGRRVRGSGGSC----------------------------------GGDGTILWRWW-FASVVCSFLVSGLLHEAVGFVALRQTVWPFNTMFLAMSAIITPWWDLLFP--AVRARSASESTPNXXXXXXXXXXXXXXXXXXXXXXXXXRNADKAVNKGQPHIHLFSATREAPRGTPGAPPGR----------LCSTGAGETISDGDLGSGT------------AMSRPAIGIYRGWFAVVFYFAASLPMTLMVDYLLWQWWRQTV 1827
RT L + A S SGA P R T+ ++W A++ KGL LDLL RHFE +G A+ C + +L YPL++ + PSA S + P++ V T IW + +W S WG+ASGL V L S L++K SF Q+ CR V + PG G E+ R +D G L+ GEF FF++ APSLVC LR+ +RR P R SEF HA LVF+A+H CSAF+APV RVLAS V S G S S W+D W E + G +G W ++ L GG+ E L G A + + AA+ L M V SPM HF+ FYGFWHCVCLG AE+WGYPDRN YGPWWL+ ++ +R+WS PV W+++ + RP++ A + +GG R +G SC W W ++ +FL S L+HEAV FVA+R+T WP +T L +S + WD ++P ++ + SA+ S + + I S E GT L AG + + GD GT + ++ A +RGW AV F+ ASL M L D+L+WQWWR T+
Sbjct: 41 RTVALLALAACSAKFSGAAAPSARFETSAASTVVDDWTAFLTKGLALDLLARHFEGIGKALACMFVMALVAILAYPLHLLITRSPSAVPAGGAGTGQAESERCSPGSQRRQLSSLSSSSPFLPLLSALVVASTTLPIWALAVWGSVNLDWGLASGLSVGLLSACLSLKNASFAQSWCRFNAPVTTAKEAA---------ETAGAPGGGARPREEVCRDDDRAGPPLLTLGEFLFFILAAPSLVCEQEFLRERARRAPRPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVLASAVFSPPSPSLAAESAHEALACDFRGGSSGGSGGGEYTCGGLPSIGAMIGWVDCVGWAGAEGIHTAGRSGGWFFSLLLDGGGSETAVASYFESLFCGGAGGAGLAGWWAIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPIVGHKSAAIPQPGCSSGGVRRGLAGTSCREPEEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWTWRRLMALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISESAAVSAASGEDRGGRHGTGPPAEPALWPSSSAATGSQPCATTTATDISCGSRVAETSDGTLEDHSENSYVVVEQARDLGEQHAGTSKNGGDSSCGTGGGGGVDGAGRVSKTKKAGSEWRGWGAVAFFEGASLVMGLAFDFLMWQWWRHTL 789
BLAST of mRNA_H-elongata_contig16055.3881.1 vs. uniprot
Match: D7FQW2_ECTSI (Sterol or diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW2_ECTSI) HSP 1 Score: 295 bits (756), Expect = 1.690e-84 Identity = 232/759 (30.57%), Postives = 317/759 (41.77%), Query Frame = 1
Query: 4 RTAVLFVIVAVSVACSGAKLPLL------RNSTAEEWLAYIAKGLNLDLLGRHFEEVGSAILCTSAVTFTTLLMYPLNVWASSLPSA---------SSRNDR--------------------PYI-----FVGMGTVALIWGITLWASGRFHWGVASGLIVALQSTSLTMKLVSFFQA-CRSECMVDDRPRGDGGMDESCNDQVRPTPGRGGAQGEDRSN-DACG---------LSFGEFTFFLVLAPSLVCHPSQLRKCSRRLPNILRGASEFLHAALVFLAVHTTCSAFYAPVNRVLASTVHS-------------------------------GWSDANS----WIDVSAWE----VLKVEGNGDWLHNVALTAGGAWLGE----EDLDNKNGGRANVDVI--VIAAAWLGMFVLSPMQHFLMFYGFWHCVCLGSAEVWGYPDRNIYGPWWLVMDDIRVYFRMWSAPVSHWLAASVQRPML--------EAGRQAAGRRASVAGGRRVRGSGGSCGGDGTIL------------------WRWW-FASVVCSFLVSGLLHEAVGFVALRQTVWPFNTMFLAMSAIITPWWDLLFP--AVRARSASESTPNXXXXXXXXXXXXXXXXXXXXXXXXXRNADKAVNKGQPHIHLFSATREAPRGT------------------------PGAPPGRLCSTGAGETISDGDLGSGTAMSRPAIGI-YRGWFAVVFYFAASLPMTLMVDYLLWQWWRQTVM 1830
RT L + A S SGA P ++ +EW A++ KGL LDLL RHFE +G A+ C + L YPL++ + PSA + ++R P++ V T IW + +W S WG+ASGL V L S L++K SF Q+ C V + + T G GE RS D CG L+FGEF FF++ APSLVC P LRK +RR P R SEF HA LVF+A+H CSAF+APV RV+A+ V S G S N W+D W + G+G W ++ L GG E L G A + + AA+ L M V SPM HF+ FYGFWHCVCLG AE+WGYPDRN YGPWWL+ ++ +R+WS PV W+++ + RP++ + GR G R +AG + W W ++ +FL S L+HEAV FVA+R+T WP +T L +S + WD ++P ++ + SA+ S + + + S E GT C TG G + G+G + G +RGW AV F+ ASL M L VD+L+WQWWR T++
Sbjct: 41 RTVALLALAACSAKFSGAAAPSADFETPAASTVVDEWTAFLTKGLALDLLARHFEGIGKALACMFVMALVATLAYPLHLLITRPPSAVPAGGAGKGQAESERRSPGSQRRQLSSLXXXXXXSPFLPLLSAMVVASTTLPIWTLAVWGSVNLDWGLASGLSVGLLSACLSLKSASFAQSWCCFNAPVT-----------TAKEAAEATGAPSG--GETRSREDVCGDGDLAGPPLLTFGEFLFFILAAPSLVCEPEFLRKHARRAPCPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVVAAAVFSTPSPSLVGESAQAALASDFRGCGSGDGEHTCGGSPFNGATIGWVDCVGWAGAEGIHTAGGSGGWFFSLLLDGGGPETAAISYFESLFCGGAGGAGLAGWWGIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPVVGHKNAAFSQPGRSGGGVRRGLAGTLCRKSEEXXXXXXXXXXXXXXXXXXXXXXXQTQRRWTWRRLLALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISESAAVSGASGEDSGDRHGTGPPAEQAVLPSSSAATRSQPGATATAADVSCGSTVVETSDGTLEDHSEKSYVVVDQARDLGEQHAITSKNGSDSCGTGGGGGVD----GAGRVSNTKKAGREWRGWGAVAFFEGASLVMGLAVDFLMWQWWRHTLL 782
BLAST of mRNA_H-elongata_contig16055.3881.1 vs. uniprot
Match: A0A6H5KXI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI3_9PHAE) HSP 1 Score: 270 bits (690), Expect = 2.190e-77 Identity = 188/492 (38.21%), Postives = 247/492 (50.20%), Query Frame = 1
Query: 1 RRTAVLFVIVAVSVACSGAKLPLLRNSTAEEWLAYIAKGLNLDLLGRHFEEVGSAILCTSAVTFTTLLMYPLNVWASSLPSASSRNDR--PYIFVGMGTV----ALIWGITLWASGRFH-----WGVASGLIVALQSTSLTMKLVSFFQACR---SECMVD--------DRPR-----GDGGMDESCNDQVRPTPGRGGA-QGEDRSNDAC---------------GLSFGEFTFFLVLAPSLVCHPSQLRKCSRRLPNILRGASEFLHAALVFLAVHTTCSAFYAPVNRVLASTVHSG----WSDANSWIDVSAWEVLKVEGNGDWLHNVA------------------LTAGGAWLGEEDLDNKNGGRANVDVIVIAAAWLGMFVLSPMQHFLMFYGFWHCVCLGSAEVWGYPDRNIYG----------------------------PWWLVMDDIRVYFRMWSAPVSHWLAASVQRPMLEAGRQAAGRR 1197
+RT+ L V+VA+S+A SG NS EW Y+AKG++L LL +HFE + SA+ C + T T+ L+YP+ S A+ +N R P V T A + + +WA WGVASGL V LQ +LT+K VSF Q R +E + D R DG + + Q+ +P R QG+ RSN L+F EF FFL LAPSLVC P L +RR P + ASEFLHA L ++AVH CSA +AP RVLA +HSG W+D W E+ + +G+G WL++ + + G W +D G + + V AA LG+FV SPM HFLMFY F+H VCLG AE++GYPDRN YG PWWLV+DD+R YFR+WSAPV WL+ SVQRPM+E G++ A RR
Sbjct: 36 QRTSALLVVVAMSIAASGGDGSGRSNSA--EWGVYLAKGMHLTLLQKHFEGIVSALGCMAMGTVTSFLVYPIYQRCSP---AAIQNPRAPPCRRVSSATAKTIAAAVPSMAVWAXXXXXXXXXXWGVASGLCVGLQCAALTLKSVSFVQKARPVAAEAAIAVVAAHEDLDAARVAANADDGDRAAAASGQLAISPARRSVLQGDPRSNPPSPTANGDDGGARAANPALTFREFAFFLALAPSLVCQPQYLASGARRPPRVAAAASEFLHAGLTYIAVHVACSALFAPALRVLAGVLHSGGVAGWADEEDWA-----ELRRTDGSGWWLYDSSGSLGSLFASGGGGCVHGGVGCGPGWTFSDD------GTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGELSFSLVGDRFTPSAGLEGQALRHDSAGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVGQREALRR 511
BLAST of mRNA_H-elongata_contig16055.3881.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI) HSP 1 Score: 254 bits (650), Expect = 8.140e-72 Identity = 168/496 (33.87%), Postives = 246/496 (49.60%), Query Frame = 1
Query: 40 VACSGAKLPLLRNSTAE-EWLAYIAKGLNLDLLGRHFEEVGSAILCTSAVTFTTLLMYPLNVW-------------ASSLPSASSRNDRP---YIF-VGMGTVALIWGITLWASGRFHWGVASGLIVALQSTSLTMKLVSFFQACRSECMVDDRPRGDGGMDESCNDQVRPTPGRGGAQGEDRSNDACGLSFGEFTFFLVLAPSLVCHPSQLRKCSRRLPNILRGASEFLHAALVFLAVHTTCSAFYAPVNRVLASTVHSGWSDANSWIDVSAWEVLKVEGNGDWLHNVALTAGGAWLGEEDLDNKNGGRANVDVIVIAAAWLGMFVLSPMQHFLMFYGFWHCVCLGSAEVWGYPDRNIYGPWWLVMDDIRVYFRMWSAPVSHWLAASVQRPMLE----AGRQAAGRRASVAGGRRVRGSGGSCGGDGTILWRW-WFASVVCSFLVSGLLHEAVGFVALRQTVWPFNTMFLAMSAIITPWWDLLFPAVRARSASES 1458
+A SG +P + A EWL + + + +D L HFE +G+ V ++L+YPL+ A++ PS S RP Y+ VG+ + A +W +WA R WG+ GL +AL +T+K+ SF A V P RS L+FGE+ FFL L+PSLVC ++ +RR LR ASEF HA L FL H + AP R+ S V GW + + + W L+ G W + TAG A L D ++ G R V + W+ +FV+S HF++FY FWHC+CLG AE+WG+PDRN+YG WWL+ D+ R + RMWS PV WL+ V PMLE + G ++ + + + GD + +W W +V+ +F+VSG+ HEAV ++A+R T WPFNT L + ++ +WD++FP + +SES
Sbjct: 1 MALSGVPVPAADGTVAAAEWLDFAFRSMAIDRLVHHFEGMGTGFAAMGVVASISILVYPLHSLLSPRTTPATTDNTATAAPS-SDGGGRPVGTYVAAVGLPSAA-VWAFAVWAQRRAAWGLVPGLWLALFCACVTLKITSFVAASA----VATPPXXXXXXXXXXXXXXXXXXXXXXXXAGPRS-----LTFGEYLFFLFLSPSLVCEVRLMKVSARRRSRPLRAASEFFHAVLTFLCAHCVVGSILAPSLRLFFSAVSPGWVEGAA----AGWAELEAAGGAGW---PSWTAGSALLAGGDKEDS-GTRLGQLVALGCFLWM-LFVVSSALHFMVFYAFWHCICLGMAELWGFPDRNLYGCWWLLFDEPRDFLRMWSTPVHRWLSTCVHWPMLELCSTSDEGVDGTKSPPSA--ELSTATAEVAGDPS---KWTWVPAVLATFVVSGVFHEAVVYIAMRGTCWPFNTFLLCVGGVLVIFWDIVFPLPDLKPSSES 471
BLAST of mRNA_H-elongata_contig16055.3881.1 vs. uniprot
Match: A0A6H5KWE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE0_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 7.340e-10 Identity = 54/188 (28.72%), Postives = 71/188 (37.77%), Query Frame = 1
Query: 1345 LRQTVWPFNTMFLAMSAIITPWWDLLFPAVRARSASESTPNXXXXXXXXXXXXXXXXXXXXXXXXXRNADKAVNKGQPHIHLFSATREAPRGTPGAPPGRLCSTGAGETISDGDLG----------------SGTAMSR--------PAIGIYRGWFAVVFYFAASLPMTLMVDYLLWQWWRQTVMVR 1836
+R+TVWPF+T FLA++A + P+WD LFP V A STP A+ + + +A +GT A G GE G G+ R P IG RGW A V Y +P+ L+VDY +WQWWR T M
Sbjct: 1 MRRTVWPFSTFFLAVTASMAPFWDTLFPVV----ADTSTPGTRPTGRRAFASIAAGGSDGGGTSAETEAENSAA-----VPSTAARPTTAQGTVNACSGNDIGAENGEPADGQHAGHPSKGVANKNRVVTGQQGSEAPRLGRKGAPWPKIGRRRGWAAAVVYGGMYMPLALVVDYFVWQWWRHTHMAE 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16055.3881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16055.3881.1 >prot_H-elongata_contig16055.3881.1 ID=prot_H-elongata_contig16055.3881.1|Name=mRNA_H-elongata_contig16055.3881.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=613bp RRTAVLFVIVAVSVACSGAKLPLLRNSTAEEWLAYIAKGLNLDLLGRHFEback to top mRNA from alignment at H-elongata_contig16055:3558..6582- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16055.3881.1 ID=mRNA_H-elongata_contig16055.3881.1|Name=mRNA_H-elongata_contig16055.3881.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3025bp|location=Sequence derived from alignment at H-elongata_contig16055:3558..6582- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16055:3558..6582- >mRNA_H-elongata_contig16055.3881.1 ID=mRNA_H-elongata_contig16055.3881.1|Name=mRNA_H-elongata_contig16055.3881.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3678bp|location=Sequence derived from alignment at H-elongata_contig16055:3558..6582- (Himanthalia elongata Himel1 dioecious)back to top |