mRNA_H-elongata_contig160321.3873.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 182 bits (463), Expect = 1.460e-47 Identity = 97/260 (37.31%), Postives = 146/260 (56.15%), Query Frame = 1
Query: 73 GPEPITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYIHTM 852
G EP ++ EAQAS EWP+W++A+ E D G W++ + K + +G + VF+RK NK+G++ KYK RLV QG+ Q+ G+ + E+ P SIR +L + WE Q+DV AYL D++EEIY+ PE + D ++ L+K +YGL +G W +K EL G++ +ADPCV+ V DDLL+ + + + E+ RDL F + DLGE +G I DR AG + + Q YI ++
Sbjct: 904 GDEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESI 1163
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY) HSP 1 Score: 173 bits (439), Expect = 1.990e-44 Identity = 93/256 (36.33%), Postives = 142/256 (55.47%), Query Frame = 1
Query: 85 ITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYIHTM 852
+ + +AQAS EW +W++A+ E D G W++ + K + +G + VF+RK NK+ ++ KYK RLV QG+ Q+ G+ + E+ P SIR +L + WE Q+DV AYL D++EEIY+ PE + D ++ L+K +YGL +G W +K EL G++ +ADPCV+ V DDLL+ + + + E+ RDL F + DLGE +G I DR AGTL + Q YI ++
Sbjct: 713 VLLTKAQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGTLQISQQHYIESI 968
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 172 bits (436), Expect = 5.570e-44 Identity = 93/267 (34.83%), Postives = 148/267 (55.43%), Query Frame = 1
Query: 61 ARQLGPE-PITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYIHTMAE 858
A ++GP+ P T+ +A+ S EW W+ A+ E + G W++ E + + ++G+R VF +K ++ GK+ +YK RLV QGF Q+ G+ Y ++ P ++R + + A WE RQ+D+ AYL ++EEEI++E PE + D +V LK +YGL AG +W KK +L GF + ADPCV+ G + DD+++ ++ + V L F +KDLGE LG I +R T+T+ Q YI+T+ E
Sbjct: 847 AGEIGPDVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITILTVWV-DDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILE 1112
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 172 bits (435), Expect = 7.590e-44 Identity = 96/254 (37.80%), Postives = 142/254 (55.91%), Query Frame = 1
Query: 82 PITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYI 843
P ++ EA+AS EW +WK+A+ EM G + + G+ +G + VF +K ++DG I +YK RLV QG+ Q+ G+ Y E+ P S+R L + A E Q+DV AYL ++EEEIY+ PE Y D +V L+K +YGL +G W ++F +L + GF +AD CV++RI G + DDLL+ S T D + +L + F +KDLGE +G I DR GT+++ Q QYI
Sbjct: 879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWV-DDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYI 1131
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 168 bits (425), Expect = 2.300e-43 Identity = 104/280 (37.14%), Postives = 154/280 (55.00%), Query Frame = 1
Query: 13 SVKTLPPLIRVPTCGSARQLGPEPITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVF-RRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYI 843
S+ +P L+ P RQ +P ++ EA S+EWP+WK AI +EM + G + +VE K ++G++ VF+ K N + +IE YK RLV QGF QV GI + E+ P + ASI ++L + A WE Q+DV AYL D+EEEIY++ P + K+ V LK+ +YGL +G + KK EL + G S+ D CVF R +++ DD +A TK R++ + F + DLGE + LG + DR+ TL++ QH YI
Sbjct: 97 SIFAMPALMETP-----RQ---DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYI 367
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 170 bits (431), Expect = 2.590e-43 Identity = 100/258 (38.76%), Postives = 146/258 (56.59%), Query Frame = 1
Query: 79 EPITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVF-RRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYI 843
+P ++ EA S+EWP+WK AI +EM + G + +VE K ++G++ VF+ K N +G+IE YK RLV QGF QV GI + E+ P + ASIR++L + A WE Q+DV AYL D+EEEIY+ P + K+ V LK+ +YGL +G + KK EL + G S+ D CVF R +++ DD +A TK R++ + F + DLGE + LG + DR+A TL++ Q YI
Sbjct: 921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYI 1177
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT) HSP 1 Score: 159 bits (402), Expect = 4.950e-42 Identity = 100/266 (37.59%), Postives = 145/266 (54.51%), Query Frame = 1
Query: 79 EPITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDS--RKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVF-RRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYIHTMAELLA 867
EP T EA SSE PQWK AI E++ + W++V+ G LG R +FKRK+ DG I+KYK RLVV+G+RQ +G+ Y ++ P + SIRMVL + A + Q+DV A+L ++EEEIY+E PE + S +V L K++YGL A W +KF + GF+I++ D CV+ + HG V+ DD+L+ + + L S F +KD+G A LG IT R L + Q Y+ + E +
Sbjct: 29 EPKTYQEAVNSSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQWHQKFDQAMMESGFKINECDKCVYVKNTTHGYVILCLYV--DDMLIIGSNDKMIRSTKDMLKSKFDMKDMGLADVILGVKIT--RTQDGLILSQTHYVDKILEKFS 290
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 166 bits (419), Expect = 1.020e-41 Identity = 101/279 (36.20%), Postives = 153/279 (54.84%), Query Frame = 1
Query: 79 EPITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVFRRIL--HGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYI------HTMAELLA*RRPASSR 891
+P++ +A + + +W++A E++ GV++ V R + + ++G++ VFK K DG++EKYK RLV QGF QV+GI Y E+ P + SIR++L + A WE Q+DV A+L ++EEEIY+++P ++ S V LKKA+YGL A W KK EL+ GF QAD CVF + + H ++ DD +V S + + DL S F + DLGE + L +T +R T+ + Q QYI H MAE P S+
Sbjct: 994 DPLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYV---DDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILERHGMAECKPVHTPMDSK 1269
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A2N9IT45_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IT45_FAGSY) HSP 1 Score: 164 bits (414), Expect = 1.210e-41 Identity = 95/262 (36.26%), Postives = 147/262 (56.11%), Query Frame = 1
Query: 79 EPITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAY--RDSRKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYIHTMAE 858
+P T +A + +W A+ E D GVW++V+R +G V+G + +FKRK + GK+EK+K RLV +G+ Q G+ +EE+ P SIR +L+++A +E Q+DV A+L D+EE++Y+E PE + + +V L+K++YGL A W KF + GF + ++PCV+ R +H VV DD+L+A ++ + L F +KDLGEASY LG I DR L++ Q YI T+ E
Sbjct: 330 DPSTYSQAIKDFDSKKWISAMNEEFDSMGKNGVWRLVKRHEGMKVVGCKWIFKRKRDVSGKVEKFKARLVAKGYTQEYGVDFEETFSPVVRIQSIRAILSLVAFFDFELYQMDVKTAFLNGDLEEDVYMEQPEGFISKGDENKVCKLEKSIYGLKQASRQWNLKFHESITMMGFMQNSSEPCVYVRKIHDKVVILTLYV-DDILLAGNDVDMLDEVKQWLFKTFEMKDLGEASYILGIKIERDRVNRKLSLSQENYIDTLLE 590
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 164 bits (416), Expect = 2.580e-41 Identity = 108/283 (38.16%), Postives = 150/283 (53.00%), Query Frame = 1
Query: 79 EPITMGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW*KKFGIELEAKGFQISQADPCVFRRILHGIVVXXXXXXXDDLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITWDRNAGTLTVDQHQYI------HTMAELLA*RRPASSRPWQEEK 909
EP T EA + + +WK A E+ V ++ VER + + V+ + VFK K DG+IEKYK RLV +GF QV+G+ + E+ P + AS+R +L + A L E Q+DV A+L D++EEIY+++P + S V L KA+YGL AG W KK E EA GF +D VF + GI++ DD+L+ S DL S F + DLGEA + LG IT DR L + QHQY+ H MA+ RP S+ Q +K
Sbjct: 925 EPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDGILLIIAIYV-DDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADC----RPVSTPMAQNQK 1202 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig160321.3873.1 >prot_H-elongata_contig160321.3873.1 ID=prot_H-elongata_contig160321.3873.1|Name=mRNA_H-elongata_contig160321.3873.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp MGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRback to top mRNA from alignment at H-elongata_contig160321:415..1469+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig160321.3873.1 ID=mRNA_H-elongata_contig160321.3873.1|Name=mRNA_H-elongata_contig160321.3873.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1055bp|location=Sequence derived from alignment at H-elongata_contig160321:415..1469+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig160321:415..1469+ >mRNA_H-elongata_contig160321.3873.1 ID=mRNA_H-elongata_contig160321.3873.1|Name=mRNA_H-elongata_contig160321.3873.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig160321:415..1469+ (Himanthalia elongata Himel1 dioecious)back to top |