prot_H-elongata_contig15839.3786.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15839.3786.1
Unique Nameprot_H-elongata_contig15839.3786.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: A0A6H5JFY8_9PHAE (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFY8_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 9.150e-80
Identity = 121/172 (70.35%), Postives = 142/172 (82.56%), Query Frame = 0
Query:    1 MGQELWLVFPDDAEATLARETYGGTTFRVVSIQSAIRDLKDDNCQLQIVVNPGFNVEEWIVLDKLARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGWIFRKAPEDWQIISMSQLGNKQGRQAVESRVLESTADRPDYNRALKVVQAAAQQ 172
            MG+ LWL       A LA+ TYGGTTFRVV I SAI+DLKD+ CQ+QIVVNPGF+V EWIVLD L RP VPMVMLNG LD+LRGGYYPRIF+PGLY+A +RFLK FETVYYLKALPGGWIFR+APEDWQ++S +Q   K+G++A ES+VL ST DRPDYN A+K VQAA ++
Sbjct:  207 MGKALWL-------AELAQNTYGGTTFRVVGINSAIKDLKDEECQMQIVVNPGFDVNEWIVLDSLVRPDVPMVMLNGNLDKLRGGYYPRIFFPGLYNAKERFLKKFETVYYLKALPGGWIFRRAPEDWQVVSAAQ-SEKRGQRAAESKVLSSTPDRPDYNTAVKTVQAAGRE 370          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: A0A4D9D5M4_9STRA (DUF1995 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5M4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.150e-54
Identity = 92/196 (46.94%), Postives = 133/196 (67.86%), Query Frame = 0
Query:    2 GQELWLVFPDDAEATLARETYGGTTFRVVSIQSAIRDLKDDNCQLQIVVNPGFNVEEWIVLDKLARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGWIFRKAPEDWQ-IISMSQL--------GNKQGRQAVESRVLESTADRPDYN--------RALKVVQAAAQQQRAQSKES 180
            G +LW++FPD  EATLA + +GG  FR++ I +A++  KD+ C+LQI V PGFNV+E+I L+K+ RP VPM+++NG LDR+RGGYYPRIFYPGLY   +R L+ FE VYYLK   GG++FRK PE+WQ +++   L        G+K GR+ V ++V+ +  +RP YN         +L + +AA + Q A  +E+
Sbjct:   38 GAKLWVIFPDGKEATLAGKRWGGVNFRIMGIDTAMKASKDEACELQIAVTPGFNVQEYINLEKVRRPGVPMIVVNGNLDRIRGGYYPRIFYPGLYKVKERMLQYFEPVYYLKPAQGGFLFRKFPEEWQQVLAYYDLQPGAGRGRGDK-GRKQVLTKVVATCEERPAYNDVVNALKKESLSMARAAQEAQEAAEREA 232          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: W7TLD5_9STRA (DUF1995 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLD5_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.970e-54
Identity = 93/196 (47.45%), Postives = 135/196 (68.88%), Query Frame = 0
Query:    2 GQELWLVFPDDAEATLARETYGGTTFRVVSIQSAIRDLKDDNCQLQIVVNPGFNVEEWIVLDKLARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGWIFRKAPEDWQ-IISMSQL--------GNKQGRQAVESRVLESTADRPDYN--------RALKVVQAAAQQQRAQSKES 180
            G +LW++FPD  EATLA + +GG  FR++ I +A++  KD+ C+LQI V PGFNV+E+I L+K+ RP VPM+++NG LDR+RGGYYPRIFYPGLY+  +R L+ FE VYYLK   GG+IFRK PE+WQ +++   L        G+K GR+ V ++V+ ++ +RP YN         +L + +AA + Q A  +E+
Sbjct:  127 GAKLWVIFPDGKEATLAGKRWGGVNFRIMGIDTAMKASKDEPCELQIAVTPGFNVQEYINLEKVRRPGVPMIVVNGNLDRIRGGYYPRIFYPGLYNVKERMLQYFEPVYYLKPAQGGFIFRKFPEEWQQVLAYYDLQPGTGRGRGDK-GRKEVLTKVVATSEERPAYNDVVNALKKESLSMARAAQEAQEAAEREA 321          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: A0A836CP02_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP02_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.150e-49
Identity = 90/189 (47.62%), Postives = 120/189 (63.49%), Query Frame = 0
Query:    1 MGQELWLVFPDDAEATLARETY-----GGTTFRVVSIQSAI--RDLKDDNCQLQIVVNPGFNVEEWIVLDKL------------ARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGWIFRKAPEDWQIISMSQLGNKQGRQAVESRVLESTADRPDYNRALKVVQAAA 170
            MG+ LW VF D  EA LA + +     G   FRV SI+ A+  R   D  C LQ+VV PGFN++EWI LD L            A     MV+LNG LD++RGGYYP++ YPGL+ A  RF+KNFE VYYLKALP GW+FR+ PEDWQ+I  ++ G+       +  VL++++ RP+YN A K+++AAA
Sbjct:   31 MGKALWAVFADPGEAKLAAKAFTGGASGSLPFRVTSIKEALGKRAAADGGCDLQLVVQPGFNIDEWIQLDTLYAAGAKARQAAGAAGQPSMVVLNGSLDKVRGGYYPKLVYPGLHAAKDRFIKNFEPVYYLKALPEGWLFRRYPEDWQVI-YAERGS-------DPVVLQTSSTRPEYNNAAKLIKAAA 211          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: M2Y6Q8_GALSU (DUF1995 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6Q8_GALSU)

HSP 1 Score: 117 bits (292), Expect = 7.350e-29
Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    6 WLVFPDDAEATLARETYGGTTFRVVSIQSAIRDLKDDNCQLQIVVNPGFNVEEWIVLDKLARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGWIFRKAPEDWQII 131
            ++VFPDDAE+ LARE     T   V I S  RD+   +  L +++NPGF V+EW  +++     VP+++ N  LD+LRGGYYPR  YP LY    + L  FE VYY++    G + R+ P  WQI+
Sbjct:  117 FVVFPDDAESKLAREDRDFRTLDSVFITSLQRDIDLQDASLVVILNPGFQVQEWFEVERFCNYQVPVILFNADLDKLRGGYYPRFLYPKLYATKDKCLTKFEPVYYVRFFVNGALIRRYPNPWQIV 242          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: A0A5J4Z109_PORPP (Protein LOW PSII ACCUMULATION 3, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z109_PORPP)

HSP 1 Score: 114 bits (285), Expect = 1.530e-27
Identity = 68/166 (40.96%), Postives = 96/166 (57.83%), Query Frame = 0
Query:    7 LVFPDDAEATLARETYGGTT---FRVVSIQSAI-----RDLKDDNCQ-LQIVVNPGFNVEEWIVLDKL--ARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGW--IFRKAPEDWQIISMSQLGNKQGRQAVESRVLESTADRPDY 159
            LVFPD  EA LA + +G +T   F V S+ +A      R+    + + L +VVNPGFN+EEW+ L+ L    PS P++++NGG+DR+R GYYPR+FYP L+    RFL  FE V++ K    G   ++RK P DWQ +   + G          R+L   A RP+Y
Sbjct:  128 LVFPDAKEAALATKVFGESTVLPFEVGSLAAAATMQAEREQPAGSTRTLFVVVNPGFNIEEWLQLESLHLGHPSDPILVINGGMDRVRSGYYPRLFYPKLHQTKDRFLCKFEPVFFYKPFGSGLGTLYRKFPADWQTLFHVKDGGGY-------RLLSQDAQRPEY 286          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: A0A7S0G1A8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1A8_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 1.670e-27
Identity = 64/178 (35.96%), Postives = 100/178 (56.18%), Query Frame = 0
Query:    5 LWLVFPDDAEATLARETY----GGTTFRVVSIQSAIRDLKDDNCQLQIVVNPGFNVEEWIVLDKLARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPG-GWIFRKAPEDWQIISMSQLGNKQGRQAVESRVLESTADRPDYNRALKVVQAAAQQQRAQS 177
            L + FPD  EA LA+ ++    G   F + +I++A RD    N +L  V+NPGFN++E+I L+        +V++NG LDR+RGGYYPRIFYP L+   +R L+ F ++Y+ K+ P  G + R  P  W++   S  G        E + L  + +RP Y    ++++ AA  +R  S
Sbjct:   45 LSVAFPDKGEAVLAQRSWKVDEGEERFYISTIEAAPRD---PNAELFFVLNPGFNIDEYINLENFDDEKRTIVVINGELDRIRGGYYPRIFYPKLHKVAERSLRKFVSIYFFKSYPNRGTLLRAYPGPWRLFYTSAQG--------EIKCLIESEERPSYQEMERILRKAADDERLSS 211          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: M1VKG6_CYAM1 (DUF1995 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VKG6_CYAM1)

HSP 1 Score: 112 bits (280), Expect = 2.480e-27
Identity = 61/142 (42.96%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    3 QELWLVFPDDAEATLARETYGGT--TFRVVSIQSAIRDLKDDNCQ---LQIVVNPGFNVEEWIVLDK--LARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGWIFRKAPEDWQIISMSQLG 137
            + L LVFPD AEA +A + YG +  TF + ++    R       +   L  VV PGFN++EW+ L++  L  P   +V+LNG +DRLR  YYP +FYP L    KR+L+ FE +YYLK LP G +FR  PE WQ    +  G
Sbjct:   77 KRLHLVFPDVAEAKIAEKVYGSSEHTFTLSALPLYERPAFLQQVEAPALVFVVQPGFNIDEWLQLERPALLYPDASIVVLNGNMDRLRSNYYPPLFYPRLTALRKRYLEQFEPIYYLKPLPNGLLFRVFPEPWQTFFCASPG 218          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: A0A7S0AMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AMI1_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.740e-26
Identity = 48/123 (39.02%), Postives = 79/123 (64.23%), Query Frame = 0
Query:   46 LQIVVNPGFN--VEEWIVLDKL--ARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPG----GWIFRKAPEDWQIISMSQLGNKQGRQAVESRVLESTADRPDYN 160
            L +V+ PG    VE+W+ ++K+  A P    +++NG LD++RGGYYP +F+P L     RF K FE+V+YLK +      GWI+R+ PEDWQ++  ++  + +G   +E  V+ ++ +RP+YN
Sbjct:   11 LTLVIQPGNGGPVEDWVNVEKMSDANPDTTTIIVNGALDKVRGGYYPAVFFPKLAQTVDRFYKTFESVFYLKPISDKGVYGWIYRQYPEDWQVVLQTRQSDGKGGMFIEDTVVYTSEERPEYN 133          
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Match: A0A7S0ZAT4_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAT4_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 1.070e-25
Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = 0
Query:    7 LVFPDDAEATLARETYGGTTFRVVSIQSAIRDLKDDNCQLQIVVNPGFNVEEWIVLDKLARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATKRFLKNFETVYYLKALPGGW--IFRKAPEDWQIISMSQLGN 138
            + FPD  E  LA+  +   +  +  I S    L  D+ +  +VV PGFNV+EW+ ++KL R   P+++LNG +DR+RGGYYPRIFYPGL+    RFL  FE +++LK    G   +FRK PE WQ +     G+
Sbjct:  152 VAFPDAGETKLAKNAWKNESDNI-KISSIKAGLDSDSGKSILVVMPGFNVDEWLDMEKL-RIGPPIIVLNGEMDRVRGGYYPRIFYPGLHRVKDRFLNKFEPIFFLKQFGSGLGVLFRKYPEPWQTLFRDSDGS 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15839.3786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFY8_9PHAE9.150e-8070.35DUF1995 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A4D9D5M4_9STRA3.150e-5446.94DUF1995 domain-containing protein n=1 Tax=Nannochl... [more]
W7TLD5_9STRA4.970e-5447.45DUF1995 domain-containing protein n=1 Tax=Nannochl... [more]
A0A836CP02_9STRA2.150e-4947.62DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
M2Y6Q8_GALSU7.350e-2942.86DUF1995 domain-containing protein n=1 Tax=Galdieri... [more]
A0A5J4Z109_PORPP1.530e-2740.96Protein LOW PSII ACCUMULATION 3, chloroplastic n=1... [more]
A0A7S0G1A8_9RHOD1.670e-2735.96Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1VKG6_CYAM12.480e-2742.96DUF1995 domain-containing protein n=1 Tax=Cyanidio... [more]
A0A7S0AMI1_9STRA4.740e-2639.02Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S0ZAT4_9RHOD1.070e-2542.54Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 2..160
e-value: 1.3E-21
score: 77.6
NoneNo IPR availablePANTHERPTHR34051FAMILY NOT NAMEDcoord: 4..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15839contigH-elongata_contig15839:1878..3998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15839.3786.1mRNA_H-elongata_contig15839.3786.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15839 970..4615 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15839.3786.1 ID=prot_H-elongata_contig15839.3786.1|Name=mRNA_H-elongata_contig15839.3786.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
MGQELWLVFPDDAEATLARETYGGTTFRVVSIQSAIRDLKDDNCQLQIVV
NPGFNVEEWIVLDKLARPSVPMVMLNGGLDRLRGGYYPRIFYPGLYDATK
RFLKNFETVYYLKALPGGWIFRKAPEDWQIISMSQLGNKQGRQAVESRVL
ESTADRPDYNRALKVVQAAAQQQRAQSKES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995