mRNA_H-elongata_contig15657.3688.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15657.3688.1
Unique NamemRNA_H-elongata_contig15657.3688.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A6H5L3S5_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3S5_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 4.920e-32
Identity = 119/208 (57.21%), Postives = 130/208 (62.50%), Query Frame = 1 
Query:    1 ERFWRKTVSSCEHSDAPHYGKGFCRPCYM---------------REYNRAKRRGEEVVRLPEPPRVVVSYRPPGVLASSSSAGSTAAGTAVATAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSRGPSTTSLKTTGLPPPLCADCGQTERSWSLVLICDGCNATFHLGCQGRSNQPDGEWFCPNCTTILLDSDSEDEGA 579
            ++ WR+TVSSCEH+DAPHYGKGFCRPCYM               REYN+AKRRGE VVRL  P         P                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            KTT LPPP+C  C QTERSW  VL+CDGC ATFHLGC   S+QP GEW+CP CT+ LLDSDSE + A
Sbjct:  191 DKHWRRTVSSCEHADAPHYGKGFCRPCYMVSGEGAKKDRGAFCGREYNKAKRRGENVVRLNCPRPEASPSSTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKTTALPPPICGRCKQTERSWPSVLVCDGCEATFHLGCAHMSSQPCGEWYCPRCTSFLLDSDSEADDA 398
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: D7FSE7_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE7_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 5.340e-20
Identity = 46/67 (68.66%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:  379 KTTGLPPPLCADCGQTERSWSLVLICDGCNATFHLGCQGRSNQPDGEWFCPNCTTILLDSDSEDEGA 579
            KTT LPPP+C  C QTERSW  VL+CDGC ATFHLGC   S+QP GEW+CP CT+ LLDSDSE + A
Sbjct:  101 KTTALPPPICGRCKQTERSWPSVLVCDGCEATFHLGCARMSSQPFGEWYCPRCTSFLLDSDSEADDA 167
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A6H5KWR0_9PHAE (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR0_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.330e-14
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -2 
Query: 4261 QGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAWRADGG 4410
            +GSGMS QQKACCDSFVYISQ GGGTASLNV VAASIVLHR+  WR++ G
Sbjct:  109 EGSGMSEQQKACCDSFVYISQHGGGTASLNVAVAASIVLHRYAGWRSNMG 158
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A835YUT9_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.380e-10
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = -2 
Query: 4273 ISRVCSRQGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAWR 4431
            I+ +   +GSGMS +QK  CDSFV I Q+GGGTASLNVTVAA+IV+HRF  W+
Sbjct:  128 IAFLMGNEGSGMSAKQKRACDSFVVIPQYGGGTASLNVTVAANIVMHRFSVWQ 180
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A4D9DD77_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD77_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.180e-10
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = -2 
Query: 4267 ISRVCSRQGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAWRAD 4431
            I+ +   +G+GMS +Q   CD FVYISQ+G GTASLNV VA SIV+HRF  W AD
Sbjct:   71 IALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAAD 125
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A7S2RGB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGB6_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.020e-10
Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = -2 
Query: 4276 NNIQ*RGVPSSDRTFALTQRPNLM-HCHISRVCSRQGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAW 4512
            +NIQ  GV   + +  + +  N++ +   + +   +G GM+ +Q + CD F+ I+Q+GGGTASLNV VAAS+VLHRF  W
Sbjct:   37 SNIQIIGVEIDETSVDVEKMENMLTNRDTAFMMGNEGQGMNAKQMSLCDGFIRIAQYGGGTASLNVNVAASVVLHRFQIW 116
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A3M6VIB3_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIB3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.890e-10
Identity = 37/78 (47.44%), Postives = 47/78 (60.26%), Query Frame = -2 
Query: 4276 NIQ*RGVPSSDRTFALTQRPNLMHCHISRVCSRQGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAW 4509
            NI+  GV       ++  +P   H   + +   +GSGM+  Q A CD FVYI Q+GGGTASLNVTVAASI+L  F  W
Sbjct:   90 NIRIIGVEIMQNAKSIADQP--FHGDSAFIMGNEGSGMNAAQVAICDDFVYIPQYGGGTASLNVTVAASIILQSFALW 165
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A1V9YZQ8_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZQ8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.890e-10
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = -2 
Query: 4270 QGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAWRA 4410
            +GSG+S  Q A CD FVYI Q+GGGTASLNVTVAASI++HR+  W A
Sbjct:  126 EGSGLSDAQVAICDGFVYIPQYGGGTASLNVTVAASIIMHRYAVWAA 172
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: A0A0K9PY49_ZOSMR (RNA methyltransferase, TrmH family protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PY49_ZOSMR)

HSP 1 Score: 71.6 bits (174), Expect = 6.080e-10
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = -2 
Query: 4276 GVPSSDRTFALTQRPNLMHCHISRVCSRQGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAW 4494
            GV  +D   ++ + P       + +   +GSG+S ++ A CD FVYISQ+GGGTASLNVTVAASIVLH+F  W
Sbjct:   83 GVEIADGAVSIEKHP--FRKSTAFLLGNEGSGLSEKEYAMCDFFVYISQYGGGTASLNVTVAASIVLHQFGVW 153
[Close]
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Match: UPI001C4C1D4B (uncharacterized tRNA/rRNA methyltransferase slr0955-like isoform X1 n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C1D4B)

HSP 1 Score: 71.6 bits (174), Expect = 7.040e-10
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = -2 
Query: 4276 GVPSSDRTFALTQRPNLMHCHISRVCSRQGSGMSVQQKACCDSFVYISQFGGGTASLNVTVAASIVLHRFMAW 4494
            GV  +D  FA+TQ P       + +   +G+G+S ++   CD FVYI Q+G GTASLNVTVAASIVLH F  W
Sbjct:   90 GVEITDGAFAITQHP--FRKSTAFLLGNEGTGLSAKECEICDFFVYIPQYGCGTASLNVTVAASIVLHHFAVW 160
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15657.3688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3S5_9PHAE4.920e-3257.21PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D7FSE7_ECTSI5.340e-2068.66PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KWR0_9PHAE1.330e-1480.00SpoU_methylase domain-containing protein n=1 Tax=E... [more]
A0A835YUT9_9STRA1.380e-1064.15Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A4D9DD77_9STRA3.180e-1060.00SpoU_methylase domain-containing protein n=1 Tax=N... [more]
A0A7S2RGB6_9STRA4.020e-1042.50Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A3M6VIB3_9STRA5.890e-1047.44SpoU_methylase domain-containing protein n=1 Tax=P... [more]
A0A1V9YZQ8_9STRA5.890e-1068.09SpoU_methylase domain-containing protein n=1 Tax=A... [more]
A0A0K9PY49_ZOSMR6.080e-1050.68RNA methyltransferase, TrmH family protein n=1 Tax... [more]
UPI001C4C1D4B7.040e-1050.68uncharacterized tRNA/rRNA methyltransferase slr095... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15657contigH-elongata_contig15657:689..6763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size4792
Cds size3201
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929923.688037-UTR-H-elongata_contig15657:688..21951622929923.688037-UTR-H-elongata_contig15657:688..2195Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15657 689..2195 -
1691679210.1319704-UTR-H-elongata_contig15657:688..21951691679210.1319704-UTR-H-elongata_contig15657:688..2195Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15657 689..2195 -
1622929924.1088102-UTR-H-elongata_contig15657:6679..67631622929924.1088102-UTR-H-elongata_contig15657:6679..6763Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15657 6680..6763 -
1691679210.1829202-UTR-H-elongata_contig15657:6679..67631691679210.1829202-UTR-H-elongata_contig15657:6679..6763Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15657 6680..6763 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929923.701633-CDS-H-elongata_contig15657:2195..33771622929923.701633-CDS-H-elongata_contig15657:2195..3377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 2196..3377 -
1691679210.1396828-CDS-H-elongata_contig15657:2195..33771691679210.1396828-CDS-H-elongata_contig15657:2195..3377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 2196..3377 -
1622929924.0493808-CDS-H-elongata_contig15657:3653..43661622929924.0493808-CDS-H-elongata_contig15657:3653..4366Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 3654..4366 -
1691679210.1481292-CDS-H-elongata_contig15657:3653..43661691679210.1481292-CDS-H-elongata_contig15657:3653..4366Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 3654..4366 -
1622929924.0680094-CDS-H-elongata_contig15657:4453..53821622929924.0680094-CDS-H-elongata_contig15657:4453..5382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 4454..5382 -
1691679210.1565583-CDS-H-elongata_contig15657:4453..53821691679210.1565583-CDS-H-elongata_contig15657:4453..5382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 4454..5382 -
1622929924.0849938-CDS-H-elongata_contig15657:5799..61731622929924.0849938-CDS-H-elongata_contig15657:5799..6173Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 5800..6173 -
1691679210.1652672-CDS-H-elongata_contig15657:5799..61731691679210.1652672-CDS-H-elongata_contig15657:5799..6173Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 5800..6173 -
1622929924.0978625-CDS-H-elongata_contig15657:6676..66791622929924.0978625-CDS-H-elongata_contig15657:6676..6679Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 6677..6679 -
1691679210.1749525-CDS-H-elongata_contig15657:6676..66791691679210.1749525-CDS-H-elongata_contig15657:6676..6679Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15657 6677..6679 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15657.3688.1prot_H-elongata_contig15657.3688.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15657 2196..6679 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15657.3688.1

>prot_H-elongata_contig15657.3688.1 ID=prot_H-elongata_contig15657.3688.1|Name=mRNA_H-elongata_contig15657.3688.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1067bp
MREYNRAKRRGEEVVRLPEPPRVVVSYRPPGVLASSSSAGSTAAGTAVAT
AAGAATAGRTATAARAATVARAATAARAATTLTAMTSSSSRGPSTTSLKT
TGLPPPLCADCGQTERSWSLVLICDGCNATFHLGCQGRSNQPDGEWFCPN
CTTILLDSDSEDEGAEPEDNGPCRLPSPSALSSASPRKNAVGHHPTDVAS
SKACTRSTNFAPRGGYAANPEPGGPAVTFDDKMDGSLDKSAVGSARDGPN
SDTALGVSGAGAATDVAVAAVTLGMSDAVGSEAVGWQTLRPISASGSTPE
SDVLPSAATIRIGINTYDGRTAGAGVGAKGTEHLKGDVRGCRCPDCVSIL
LQSGGTRPPRAAKVIVPGDAVTNSTPISVPSTATTCPVKRGSGAPIVSAP
VAGAKRQRQRSPRPSPAAQAVSAGPRKTGAGERSTTPAPSPNAPSAITAP
SSANAPSAANAPSATNAPSAPSTHPAAKAQSTVNAPSPANMQSTANAPST
VNAPSPAAATSLEARVGLRPRQDKRKRHREDEESEWGLFSSEDDQEGADG
RRERGTGKGKGKGKGAAACSDDGSYSMSSDGASSSGDELKDGVRRRKRRT
GRTNKNGTNSVGRGSTGDMWRKGLGAKANTTDASPGGVRRRVASRTTRKG
VVTACEHTDRPLYSKGSCKPCYMVNYWDRRHAAQGKKPRSPRSGAGGQKK
DREVQDQGMSPESASSSNTAFGDSSTLEAKLPSAAASADPVNRTSTHADG
ARPEAHHGGGLETGMVADADAESGDGEMVDVEIESPGSSLAPVVESEASR
GNPPSSGESGAAWSKSDSEEGTRDGKVTPRFQAKNLCAGGGRKGVGKLSA
ISKAAGMHPGGPAAAVESTMLAKSKEIVRPVTVTMAKSKQDGVGQDVEAA
SATARSSAGKISTPKTIVISVIGPTPVKPLTKKSSTGTTPRLPKGSTSRE
GKGAGDAQAATTKKRPRLPAEGGHRATTMSSSSPAPPNNAASGTTVYTRN
VSIATGKGESSTKFNKAYGTGAGAGRERSAEKLPTGAKRVKITMGSASPR
EQASSYAEGAGARTGP*
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mRNA from alignment at H-elongata_contig15657:689..6763-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15657.3688.1 ID=mRNA_H-elongata_contig15657.3688.1|Name=mRNA_H-elongata_contig15657.3688.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6075bp|location=Sequence derived from alignment at H-elongata_contig15657:689..6763- (Himanthalia elongata Himel1 dioecious)
GAGAGATTCTGGCGCAAGACGGTGTCGAGCTGCGAGCACTCCGACGCACC
CCACTACGGCAAAGGCTTCTGTCGACCCTGTTACATGGTGAGCCAGGGCA
TAGCGGCGCGGGGAATGCGGGACCGTGGTGTCCGTGCGTTTGCCTGGTTT
GCTTTCGGCGCGTGTGACCTTTAAATATTTTTCTGGGTTGGACTGGAGGG
GTCGGACACGGGTGTGGAAGCATGTGTTGACAGGTGTGGATCTTGGGATG
GTTTGAATGAATTCCATTTTTTAGAGAGAAAATAAGCGTACATGTGCATT
TTTCTTCTTATTTTTCTCATTGAAGTCAAAATAGTGACTATAGTCACTAG
AAAATAGGATGTTGCTGGTTTCGTTTGTGCCCCTTAAGGTTGTTGCTCGA
GATGAGACGATGCTTCGTCTCGGGATGCATCTTTTTGTAAGACGAAAACT
TCGCGCTTAGAGCCTTTTTGACCTTTTCATATGTAAATGTACGCTCTCGG
CGTTTCGCGCAACTCTTACTCTAACGGCCTTAACCGCCTCTATCTCGCTA
TGCAACCGCCTTTATATCTCTACGCAACCGCCTCTAAAAGAGAGAATACA
ACAGGGCGAAGAGAAGAGGGGAGGAAGTCGTTCGCCTACCCGAGCCACCG
CGCGTCGTGGTCAGCTACAGGCCTCCCGGGGTGCTAGCATCTTCCAGTTC
GGCGGGGTCCACGGCCGCGGGGACAGCGGTGGCAACAGCGGCAGGAGCCG
CGACGGCGGGAAGAACCGCGACGGCGGCAAGAGCCGCAACGGTGGCAAGA
GCCGCAACGGCGGCAAGAGCTGCGACGACACTGACAGCTATGACGAGTTC
TTCGTCACGCGGTCCGAGCACGACAAGCCTGAAGACGACCGGGCTGCCGC
CCCCACTATGCGCCGACTGCGGTCAGACGGAGAGGTCGTGGTCCTTAGTG
CTGATCTGCGACGGGTGAGGGGAGGGGAGGGGAGGGGAGGGACCCCTAAT
TCTATTATTATTATTATTACTAGTGATGCATTACAATATGTATTACAATA
TGCATTACAACATGTATTACTATTACAATGAGAGGCCAAGGGGGATGAGC
ACGGAATGCTTTGCTCGAGCTGGTTGATTTTAAGACGAATGTAATGCGTC
TGGAGGGGAATGTGGATGGTATCGGAGGGGGATGTCATGATACTGTCTCC
ATGGCGCGTATAGTACAGTTACCAGAAGGGTCTCTTTCTCCCAGCCTACG
ATGACCTCGTGACTGCCTTACTGGCTACTACTCCGTCTCAATTTTTTATG
TGATTCTCTCTCTCTTTCTCCCTCTCTTTCTCTTTCTCTTTTTCTGATAC
ACAACTCACACGCGTCGGTTTTTGCGAAAAGTTGCAACGCTACCTTCCAC
CTGGGCTGCCAGGGTCGGAGCAACCAGCCCGACGGGGAGTGGTTCTGCCC
CAACTGCACAACGATCCTTCTCGATTCTGACAGCGAGGACGAAGGCGCTG
AACCTGAGGACAACGGTCCCTGCCGATTGCCGTCGCCATCGGCACTTTCG
TCCGCGTCGCCTCGGAAGAACGCCGTGGGCCACCACCCGACTGACGTCGC
TTCATCGAAAGCCTGCACCAGATCGACAAACTTCGCTCCACGCGGCGGCT
ACGCAGCGAACCCAGAACCCGGTGGCCCAGCCGTTACATTCGACGATAAA
ATGGATGGAAGCCTTGATAAGAGCGCTGTAGGCTCCGCCAGAGATGGACC
AAATTCCGACACCGCCCTTGGCGTGAGCGGAGCTGGAGCTGCTACTGATG
TTGCTGTTGCGGCGGTGACGTTAGGGATGAGCGACGCGGTCGGAAGCGAA
GCCGTGGGGTGGCAGACGCTCAGACCGATTTCAGCTTCAGGGTCGACCCC
GGAATCTGATGTGTTGCCCTCGGCAGCCACTATTAGGATAGGAATCAACA
CTTACGATGGCCGGACGGCGGGGGCAGGAGTAGGGGCGAAAGGGACGGAG
CATCTAAAGGGAGACGTGCGGGGCTGTCGGTGCCCGGACTGCGTGTCCAT
ACTCTTACAGAGCGGCGGTACTCGTCCTCCCCGGGCAGCGAAGGTTATCG
TGCCCGGCGACGCCGTAACGAACTCTACGCCGATCTCCGTCCCTTCGACG
GCGACCACTTGTCCCGTGAAGCGTGGGTCTGGTGCCCCTATCGTTTCCGC
CCCTGTCGCTGGTGCCAAGCGACAGCGACAGAGGTCACCGAGACCATCTC
CGGCAGCTCAAGCCGTTTCCGCCGGACCTAGAAAAACCGGGGCTGGGGAA
AGGTCTACGAGTACAGACGCTCACTCCACGGGGGCTGATCGGACTCAAGG
TGTTCGTAATGCCCTGTACAGTAGGGTCGTGGTTCGCGCAGGATCAGCAC
CCGCTCCTTCGCCAAACGCTCCTTCAGCGATAACTGCCCCTTCGTCGGCA
AATGCTCCTTCAGCGGCAAACGCTCCTTCAGCTACAAACGCTCCTTCGGC
GCCGAGCACTCATCCGGCGGCGAAAGCTCAATCGACCGTGAATGCCCCTT
CGCCGGCGAACATGCAGTCGACGGCGAATGCCCCTTCGACGGTGAATGCT
CCTTCGCCGGCGGCCGCTACGTCCTTGGAGGCACGAGTAGGACTCAGACC
AAGACAAGACAAGCGCAAGAGGCATCGCGAAGACGAGGAGAGCGAGTGGG
GGCTGTTCAGCAGCGAGGATGACCAGGAGGGCGCGGATGGTCGCAGAGAG
AGAGGCACAGGAAAGGGAAAGGGGAAAGGGAAAGGGGCCGCGGCGTGCAG
CGATGACGGCAGCTACTCCATGAGCAGCGACGGCGCGAGCAGCAGCGGGG
ACGAGTTGAAAGACGGTGTACGTCGGCGAAAGAGACGGACAGGACGGACA
AACAAAAACGGGACGAACTCCGTCGGCCGTGGGTCGACCGGAGACATGTG
GAGGAAAGGGTTGGGTGCGAAGGCGAATACGACGGACGCGTCACCGGGAG
GGGTGAGGAGGCGCGTGGCGTCTCGGACGACTCGCAAGGGGGTCGTCACT
GCCTGCGAGCACACGGACCGCCCTCTGTACTCGAAGGGCTCGTGCAAGCC
GTGCTACATGGTGATTTCTTGTTAAAAGTGTCACCTGGTAGTTGGGAGTT
GCATTTGAAACCTCGTCGTGGGGGATAGGGGGAGAAAGGGTTTGGCCTCG
ACTGCTGTTGCTGACCGTCAGTTTGTTCCGAGTATATATATCGCTGCTGC
TGCTGTTGCCGCCGCTTTTTTTGAAAGTGGTGACCCCCCCCCCTCCATTT
TTTTGTGGGGGGGGGGGGGGGGGGGGGGGGTGGCCCCCCGCCCCGCCGTT
TTTTTTTTTTTACTTGACGCGCACGGGGCTGAACAGGTGAACTACTGGGA
TCGCAGGCACGCTGCTCAGGGCAAGAAGCCTCGCTCGCCACGGTCTGGTG
CGGGAGGTCAGAAGAAAGATAGAGAGGTGCAAGACCAAGGCATGTCACCG
GAAAGTGCGTCGTCGTCCAATACTGCCTTCGGTGATTCATCAACTCTCGA
AGCCAAATTGCCCAGCGCTGCTGCTAGTGCCGACCCAGTAAACAGGACGT
CTACGCATGCGGACGGAGCACGTCCAGAGGCACACCACGGTGGTGGTTTG
GAGACAGGGATGGTCGCTGATGCTGATGCTGAAAGTGGAGACGGAGAAAT
GGTTGACGTCGAGATCGAGTCGCCAGGGTCATCTTTAGCGCCAGTTGTCG
AGTCGGAGGCGAGTCGAGGGAATCCGCCAAGCTCCGGTGAATCAGGCGCT
GCGTGGAGCAAAAGTGACTCAGAGGAAGGGACGCGAGACGGCAAGGTGAC
TCCGAGGTTCCAAGCGAAAAATCTTTGCGCCGGGGGAGGAAGGAAGGGCG
TCGGGAAATTATCAGCTATCTCCAAGGCGGCGGGGATGCACCCGGGTGGA
CCGGCCGCTGCTGTGGAGTCGACAATGCTCGCGAAATCGAAAGAAATTGT
TAGACCGGTTACGGTTACGATGGCCAAGTCCAAGCAGGACGGGGTTGGTC
AAGATGTGGAGGCCGCGTCGGCGACGGCTAGGTCATCGGCGGGGAAGATT
TCGACGCCTAAAACGATCGTGATATCGGTGATAGGTCCTACGCCAGTGAA
GCCGCTAACGAAGAAGTCATCTACAGGGACGACGCCGAGGCTTCCCAAGG
GATCGACATCGAGAGAGGGAAAGGGTGCCGGGGACGCGCAGGCCGCGACG
ACAAAGAAGCGCCCGCGTCTACCTGCCGAAGGAGGGCATCGCGCAACCAC
GATGAGTTCCTCCTCCCCCGCGCCCCCCAACAACGCTGCTTCTGGCACCA
CCGTATACACGCGGAATGTTTCTATCGCTACCGGAAAAGGAGAATCGTCC
ACGAAATTCAACAAAGCGTACGGCACAGGGGCTGGGGCTGGGAGGGAGCG
CTCAGCGGAAAAGCTACCCACCGGAGCTAAGAGGGTGAAGATCACCATGG
GTTCAGCCAGCCCCCGGGAGCAAGCGTCTAGCTATGCAGAAGGAGCGGGT
GCACGTACAGGGCCATAGAAAGAGTAAACATGTTTTTCTAGCCAAGGTAG
CCGAGTAGCACGAAGCGTAGCGTAAGATGAGAGGTAGGGGTGGGGGGAAG
TGGGGTCGAAGAGGACGTTGATTATCGAAGTGAAGTCTTGATAACATCGC
TATTATAGAGATTTTCATACATGGTTGTGATTGTTTTATTCGCTGTGTTT
GTGCTTCTCGAAACCCACGTTAGGCGTGCCCGAAGAAACTTGTGGGTGTT
GTTTGTCAAGGTATCGTTGAAGACCTGGATATTACCGTCGGTACTGGCGC
GCCCAACCGTGAGCGCCTGGGGGCACGTGTGAGGTCGAGTGGAGAGAGGC
GCTGCCGGTCTAGCGAAGTGACGTGGAATTCTTGAATGTTTTCCGTGATA
GATGAAAGAGGACGAGGTTACTATCGCGTTGAGGCTACACGTGATGTTCG
TGCGTACGTGGAATTCTTGCATGTTTTCTGATAGATGGAAAAAAACGAGG
TCACGTCGAGGCTGCACGTAATTTTGTTTGTGCGTTTTATATAATGTTTC
ATCTATCGTGTGGTTGTGTCGATGAAATTTGAAGAACAAAAAAAAGAACG
AAAACAAAATGAAAGCATGCACACGTCGAGCTGATGAAGGTTAGGGGCTG
ATGCGTTTGATTTCGGACGAGGTGTTGACAATTGAGGTAGACATCGTCTT
TGGACGTGTAGAATAATGTTATTGTTATGCATGTGCTTTACGTACGTCTC
GAAATGTAGCTGCATTAGGCTTAGGGAGTTCCATGTGCGGAAGCTATGTG
GTCGGGTCTGACGTATCATATTTTTTCTAGTGCAGCCTTGCCGACCGTCG
TAAGCCTCGAGCCATTTTTTATGTTCTTGTTTTACTTGGTGGTGCCAGGA
ATACTTGTTAGCGTATCTTCTCTAGAGCGGCGTATGTTGTCTGCATCAGC
AAGGCGTCGTATTGTTTGTGGAAAGTCCCGAGGAATCGACGACGCCTCCG
TCGGCTCTCCAAGCCATAAATCGGTGAAGGACGATCGACGCAGCCACCGT
CACGTTTAACGAGGCCGTTCCCCCGCCGAACTGGGATATGTACACGAAGG
AGTCACAGCATGCCTTCTGCTGAACGCTCATGCCGGAGCCCTGGCGTGAG
CAAACGCGGGAAATATGGCAGTGCATTAGGTTAGGACGTTGTGTCAGGGC
AAAGGTGCGGTCGGAAGAAGGGACTCCTCGTTATTGAATATTATTGATAT
GCAGCTAGCTGTTTGCTCGGAGGCGTTGTAGTTGGTAGGGTTGCTAATTG
TAGCTGAAAGAATGCTTAATTTTCCAGGCAAGCCCCAGGGTTTTTCTTAG
CCATAAACGACTGTCGTAGGTAATACGAGTCATATTCTACTCTTATCATA
TCATAACCCCCCTGGTGCGCGTGTACCACACAAAACCCTTGGGGACTACA
ATCCAACATCCTCGGAATTTTGGTTGCTGAATACAGTAGATGTTATAGTT
AAGATTTATAGCACAAACCGTCGCC
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Coding sequence (CDS) from alignment at H-elongata_contig15657:689..6763-

>mRNA_H-elongata_contig15657.3688.1 ID=mRNA_H-elongata_contig15657.3688.1|Name=mRNA_H-elongata_contig15657.3688.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=6402bp|location=Sequence derived from alignment at H-elongata_contig15657:689..6763- (Himanthalia elongata Himel1 dioecious)
ATGATGAGAGAATACAACAGGGCGAAGAGAAGAGGGGAGGAAGTCGTTCG
CCTACCCGAGCCACCGCGCGTCGTGGTCAGCTACAGGCCTCCCGGGGTGC
TAGCATCTTCCAGTTCGGCGGGGTCCACGGCCGCGGGGACAGCGGTGGCA
ACAGCGGCAGGAGCCGCGACGGCGGGAAGAACCGCGACGGCGGCAAGAGC
CGCAACGGTGGCAAGAGCCGCAACGGCGGCAAGAGCTGCGACGACACTGA
CAGCTATGACGAGTTCTTCGTCACGCGGTCCGAGCACGACAAGCCTGAAG
ACGACCGGGCTGCCGCCCCCACTATGCGCCGACTGCGGTCAGACGGAGAG
GTCGTGGTCCTTAGTGCTGATCTGCGACGGAGAGAATACAACAGGGCGAA
GAGAAGAGGGGAGGAAGTCGTTCGCCTACCCGAGCCACCGCGCGTCGTGG
TCAGCTACAGGCCTCCCGGGGTGCTAGCATCTTCCAGTTCGGCGGGGTCC
ACGGCCGCGGGGACAGCGGTGGCAACAGCGGCAGGAGCCGCGACGGCGGG
AAGAACCGCGACGGCGGCAAGAGCCGCAACGGTGGCAAGAGCCGCAACGG
CGGCAAGAGCTGCGACGACACTGACAGCTATGACGAGTTCTTCGTCACGC
GGTCCGAGCACGACAAGCCTGAAGACGACCGGGCTGCCGCCCCCACTATG
CGCCGACTGCGGTCAGACGGAGAGGTCGTGGTCCTTAGTGCTGATCTGCG
ACGGTTGCAACGCTACCTTCCACCTGGGCTGCCAGGGTCGGAGCAACCAG
CCCGACGGGGAGTGGTTCTGCCCCAACTGCACAACGATCCTTCTCGATTC
TGACAGCGAGGACGAAGGCGCTGAACCTGAGGACAACGGTCCCTGCCGAT
TGCCGTCGCCATCGGCACTTTCGTCCGCGTCGCCTCGGAAGAACGCCGTG
GGCCACCACCCGACTGACGTCGCTTCATCGAAAGCCTGCACCAGATCGAC
AAACTTCGCTCCACGCGGCGGCTACGCAGCGAACCCAGAACCCGGTGGCC
CAGCCGTTACATTCGACGATAAAATGGATGGAAGCCTTGATAAGAGCGCT
GTAGGCTCCGCCAGAGATGGACCAAATTCCGACACCGCCCTTGGCGTGAG
CGGAGCTGGAGCTGCTACTGATGTTGCTGTTGCGGCGGTGACGTTAGGGA
TGAGCGACGCGGTCGGAAGCGAAGCCGTGGGGTGGCAGACGCTCAGACCG
ATTTCAGCTTCAGGGTCGACCCCGGAATCTGATGTGTTGCCCTCGGCAGC
CACTATTAGGATAGGAATCAACACTTACGATGGCCGGACGGCGGGGGCAG
GAGTAGGGGCGAAAGGGACGGAGCATCTAAAGGGAGACGTGCGGGGCTGT
CGGTGCCCGGACTGCGTGTCCATACTCTTACAGAGCGGCGGTACTCGTCC
TCCCCGGGCAGCGAAGGTTATCGTGCCCGGCGACGCCGTAACGAACTCTA
CGCCGATCTCCGTCCCTTCGACGGCGACCACTTGTCCCGTGAAGCGTGGG
TCTGGTGCCCCTATCGTTTCCGCCCCTGTCGCTGGTGCCAAGCGACAGCG
ACAGAGGTCACCGAGACCATCTCCGGCAGCTCAAGCCGTTTCCGCCGGAC
CTAGAAAAACCGGGGCTGGGGAAAGGTCTACGATTGCAACGCTACCTTCC
ACCTGGGCTGCCAGGGTCGGAGCAACCAGCCCGACGGGGAGTGGTTCTGC
CCCAACTGCACAACGATCCTTCTCGATTCTGACAGCGAGGACGAAGGCGC
TGAACCTGAGGACAACGGTCCCTGCCGATTGCCGTCGCCATCGGCACTTT
CGTCCGCGTCGCCTCGGAAGAACGCCGTGGGCCACCACCCGACTGACGTC
GCTTCATCGAAAGCCTGCACCAGATCGACAAACTTCGCTCCACGCGGCGG
CTACGCAGCGAACCCAGAACCCGGTGGCCCAGCCGTTACATTCGACGATA
AAATGGATGGAAGCCTTGATAAGAGCGCTGTAGGCTCCGCCAGAGATGGA
CCAAATTCCGACACCGCCCTTGGCGTGAGCGGAGCTGGAGCTGCTACTGA
TGTTGCTGTTGCGGCGGTGACGTTAGGGATGAGCGACGCGGTCGGAAGCG
AAGCCGTGGGGTGGCAGACGCTCAGACCGATTTCAGCTTCAGGGTCGACC
CCGGAATCTGATGTGTTGCCCTCGGCAGCCACTATTAGGATAGGAATCAA
CACTTACGATGGCCGGACGGCGGGGGCAGGAGTAGGGGCGAAAGGGACGG
AGCATCTAAAGGGAGACGTGCGGGGCTGTCGGTGCCCGGACTGCGTGTCC
ATACTCTTACAGAGCGGCGGTACTCGTCCTCCCCGGGCAGCGAAGGTTAT
CGTGCCCGGCGACGCCGTAACGAACTCTACGCCGATCTCCGTCCCTTCGA
CGGCGACCACTTGTCCCGTGAAGCGTGGGTCTGGTGCCCCTATCGTTTCC
GCCCCTGTCGCTGGTGCCAAGCGACAGCGACAGAGGTCACCGAGACCATC
TCCGGCAGCTCAAGCCGTTTCCGCCGGACCTAGAAAAACCGGGGCTGGGG
AAAGGTCTACGACACCCGCTCCTTCGCCAAACGCTCCTTCAGCGATAACT
GCCCCTTCGTCGGCAAATGCTCCTTCAGCGGCAAACGCTCCTTCAGCTAC
AAACGCTCCTTCGGCGCCGAGCACTCATCCGGCGGCGAAAGCTCAATCGA
CCGTGAATGCCCCTTCGCCGGCGAACATGCAGTCGACGGCGAATGCCCCT
TCGACGGTGAATGCTCCTTCGCCGGCGGCCGCTACGTCCTTGGAGGCACG
AGTAGGACTCAGACCAAGACAAGACAAGCGCAAGAGGCATCGCGAAGACG
AGGAGAGCGAGTGGGGGCTGTTCAGCAGCGAGGATGACCAGGAGGGCGCG
GATGGTCGCAGAGAGAGAGGCACAGGAAAGGGAAAGGGGAAAGGGAAAGG
GGCCGCGGCGTGCAGCGATGACGGCAGCTACTCCATGAGCAGCGACGGCG
CGAGCAGCAGCGGGGACGAGTTGAAAGACGGTGTACGTCGGCGAAAGAGA
CGGACAGGACGGACAAACAAAAACGGGACGAACTCCGTCGGCCGTGGGTC
GACCGGAGACATGTGGAGGAAAGGGTTGGGTGCGAAGGCGAATACGACGG
ACGCGTCACCGGGAGGGGTGAGGAGGCGCGTGGCGTCTCGGACGACTCGC
AAGGGGGTCGTCACTGCCTGCGAGCACACGGACCGCCCTCTGTACTCGAA
GGGCTCGTGCAAGCCGTGCTACATGCACCCGCTCCTTCGCCAAACGCTCC
TTCAGCGATAACTGCCCCTTCGTCGGCAAATGCTCCTTCAGCGGCAAACG
CTCCTTCAGCTACAAACGCTCCTTCGGCGCCGAGCACTCATCCGGCGGCG
AAAGCTCAATCGACCGTGAATGCCCCTTCGCCGGCGAACATGCAGTCGAC
GGCGAATGCCCCTTCGACGGTGAATGCTCCTTCGCCGGCGGCCGCTACGT
CCTTGGAGGCACGAGTAGGACTCAGACCAAGACAAGACAAGCGCAAGAGG
CATCGCGAAGACGAGGAGAGCGAGTGGGGGCTGTTCAGCAGCGAGGATGA
CCAGGAGGGCGCGGATGGTCGCAGAGAGAGAGGCACAGGAAAGGGAAAGG
GGAAAGGGAAAGGGGCCGCGGCGTGCAGCGATGACGGCAGCTACTCCATG
AGCAGCGACGGCGCGAGCAGCAGCGGGGACGAGTTGAAAGACGGTGTACG
TCGGCGAAAGAGACGGACAGGACGGACAAACAAAAACGGGACGAACTCCG
TCGGCCGTGGGTCGACCGGAGACATGTGGAGGAAAGGGTTGGGTGCGAAG
GCGAATACGACGGACGCGTCACCGGGAGGGGTGAGGAGGCGCGTGGCGTC
TCGGACGACTCGCAAGGGGGTCGTCACTGCCTGCGAGCACACGGACCGCC
CTCTGTACTCGAAGGGCTCGTGCAAGCCGTGCTACATGGTGAACTACTGG
GATCGCAGGCACGCTGCTCAGGGCAAGAAGCCTCGCTCGCCACGGTCTGG
TGCGGGAGGTCAGAAGAAAGATAGAGAGGTGCAAGACCAAGGCATGTCAC
CGGAAAGTGCGTCGTCGTCCAATACTGCCTTCGGTGATTCATCAACTCTC
GAAGCCAAATTGCCCAGCGCTGCTGCTAGTGCCGACCCAGTAAACAGGAC
GTCTACGCATGCGGACGGAGCACGTCCAGAGGCACACCACGGTGGTGGTT
TGGAGACAGGGATGGTCGCTGATGCTGATGCTGAAAGTGGAGACGGAGAA
ATGGTTGACGTCGAGATCGAGTCGCCAGGGTCATCTTTAGCGCCAGTTGT
CGAGTCGGAGGCGAGTCGAGGGAATCCGCCAAGCTCCGGTGAATCAGGCG
CTGCGTGGAGCAAAAGTGACTCAGAGGAAGGGACGCGAGACGGCAAGGTG
ACTCCGAGGTTCCAAGCGAAAAATCTTTGCGCCGGGGGAGGAAGGAAGGG
CGTCGGGAAATTATCAGCTATCTCCAAGGCGGCGGGGATGCACCCGGGTG
GACCGGCCGCTGCTGTGGAGTCGACAATGCTCGCGAAATCGAAAGAAATT
GTTAGACCGGTTACGGTTACGATGGCCAAGTCCAAGCAGGACGGGGTTGG
TCAAGATGTGGAGGCCGCGTCGGCGACGGCTAGGTCATCGGCGGGGAAGA
TTTCGACGCCTAAAACGATCGTGATATCGGTGATAGGTCCTACGCCAGTG
AAGCCGCTAACGAAGAAGTCATCTACAGGGACGACGCCGAGGCTTCCCAA
GGGATCGACATCGAGAGAGGGAAAGGGTGCCGGGGACGCGCAGGCCGCGA
CGACAAAGAAGCGCCCGCGTCTACCTGCCGAAGGAGGGCATCGCGCAACC
ACGATGAGTTCCTCCTCCCCCGCGCCCCCCAACAACGCTGCTTCTGGCAC
CACCGTATACACGCGGAATGTTTCTATCGCTACCGGAAAAGGAGAATCGT
CCACGAAATTCAACAAAGCGTACGGCACAGGGGCTGGGGCTGGGAGGGAG
CGCTCAGCGGAAAAGCTACCCACCGGAGCTAAGAGGGTGAAGATCACCAT
GGGTTCAGCCAGCCCCCGGGAGCAAGCGTCTAGCTATGCAGAAGGAGCGG
GTGCACGTACAGGGCCATAGGTGAACTACTGGGATCGCAGGCACGCTGCT
CAGGGCAAGAAGCCTCGCTCGCCACGGTCTGGTGCGGGAGGTCAGAAGAA
AGATAGAGAGGTGCAAGACCAAGGCATGTCACCGGAAAGTGCGTCGTCGT
CCAATACTGCCTTCGGTGATTCATCAACTCTCGAAGCCAAATTGCCCAGC
GCTGCTGCTAGTGCCGACCCAGTAAACAGGACGTCTACGCATGCGGACGG
AGCACGTCCAGAGGCACACCACGGTGGTGGTTTGGAGACAGGGATGGTCG
CTGATGCTGATGCTGAAAGTGGAGACGGAGAAATGGTTGACGTCGAGATC
GAGTCGCCAGGGTCATCTTTAGCGCCAGTTGTCGAGTCGGAGGCGAGTCG
AGGGAATCCGCCAAGCTCCGGTGAATCAGGCGCTGCGTGGAGCAAAAGTG
ACTCAGAGGAAGGGACGCGAGACGGCAAGGTGACTCCGAGGTTCCAAGCG
AAAAATCTTTGCGCCGGGGGAGGAAGGAAGGGCGTCGGGAAATTATCAGC
TATCTCCAAGGCGGCGGGGATGCACCCGGGTGGACCGGCCGCTGCTGTGG
AGTCGACAATGCTCGCGAAATCGAAAGAAATTGTTAGACCGGTTACGGTT
ACGATGGCCAAGTCCAAGCAGGACGGGGTTGGTCAAGATGTGGAGGCCGC
GTCGGCGACGGCTAGGTCATCGGCGGGGAAGATTTCGACGCCTAAAACGA
TCGTGATATCGGTGATAGGTCCTACGCCAGTGAAGCCGCTAACGAAGAAG
TCATCTACAGGGACGACGCCGAGGCTTCCCAAGGGATCGACATCGAGAGA
GGGAAAGGGTGCCGGGGACGCGCAGGCCGCGACGACAAAGAAGCGCCCGC
GTCTACCTGCCGAAGGAGGGCATCGCGCAACCACGATGAGTTCCTCCTCC
CCCGCGCCCCCCAACAACGCTGCTTCTGGCACCACCGTATACACGCGGAA
TGTTTCTATCGCTACCGGAAAAGGAGAATCGTCCACGAAATTCAACAAAG
CGTACGGCACAGGGGCTGGGGCTGGGAGGGAGCGCTCAGCGGAAAAGCTA
CCCACCGGAGCTAAGAGGGTGAAGATCACCATGGGTTCAGCCAGCCCCCG
GGAGCAAGCGTCTAGCTATGCAGAAGGAGCGGGTGCACGTACAGGGCCAT
AG
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