prot_H-elongata_contig15557.3643.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15557.3643.1
Unique Nameprot_H-elongata_contig15557.3643.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length646
Homology
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A6H5K835_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K835_9PHAE)

HSP 1 Score: 791 bits (2042), Expect = 1.610e-275
Identity = 438/661 (66.26%), Postives = 505/661 (76.40%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPL-GLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLRE--GLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTPSVARAASVGDSLLDSTLRDDTNTINATRSGRGQDRGRSRYGGNNVIASARTGTVGDD------------GITTGDKQLTSLAATRDTCHALDRLAEQAAAKMAKAARKTDFKEAALWRDRRDALLASMQDL 646
            I    VSCIYGLG+PSKYLEASIRI+VGQ W  GWR LA+HL+Q LFY P+ N EEF +  RGSFRS   + GGGV+E+GPA+DEA+VR+ +D+AG+V RIQV+  V  G K    K    E  P   L  +L     G         D     +     DV+AHVIYPAKHHV+G GE   +++ IS EMEERC QLG  G++LEAERLRQRTENDLLL+GAVGTCKG+ENYSRHLAGRGPG+PPETL+DYFP++ WLLIVDESHVSAPQLGAM+GGD+ARK KLVEHGFRLPSALDNRPLKA+EFWSK +K+IFVSATPGKFELEL+  G  +    G D    DLVDAQAVIRPTGITDPPVDIRPSKGQVSD+VQECK RG R ERVLVTALTK+MAEDL AFL+EQGVPTAYLHSGVKPM RLELLRQLR GE+DVIVGVNLLRE  GLNLPEVSLVC+LDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADR+TPSM+RALAETDRRR+IQ +HNKLHG+TPSVA+AASVGDS+LDS   D    ++  R G        RY  ++ +AS    ++  D            G  +  +  + L  + DT  AL RLAEQA+ KM+ AA KTDFKEAALWRDRRDALL+++  +
Sbjct:  362 IVVASVSCIYGLGMPSKYLEASIRIIVGQEWTDGWRALAKHLEQGLFYIPKHNREEFEALPRGSFRSVFAEGGGGVIEIGPASDEAVVRVTLDAAGVVRRIQVVPIV-GGGKTRADK----EREPHHDLSDLLTAPDRG--------HDKPLVGSEPALDDVDAHVIYPAKHHVVGRGEMEDVMSKISEEMEERCSQLGLGGKILEAERLRQRTENDLLLLGAVGTCKGVENYSRHLAGRGPGDPPETLVDYFPENEWLLIVDESHVSAPQLGAMWGGDQARKKKLVEHGFRLPSALDNRPLKADEFWSKVDKTIFVSATPGKFELELATLGAGKSGGLGWDEI-GDLVDAQAVIRPTGITDPPVDIRPSKGQVSDMVQECKTRGGRGERVLVTALTKQMAEDLSAFLMEQGVPTAYLHSGVKPMQRLELLRQLRSGEIDVIVGVNLLREARGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRITPSMERALAETDRRREIQTRHNKLHGITPSVAKAASVGDSILDSINGD---AVHTQREG--------RYSSSDHVASWANHSLLPDQVQLLYDLAAQNGKGSAHQHKSLLTPSEDTTRALMRLAEQASTKMSSAATKTDFKEAALWRDRRDALLSTLSTI 997          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI0019DB6CB0 (Excinuclease ABC subunit UvrB n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019DB6CB0)

HSP 1 Score: 439 bits (1128), Expect = 3.380e-142
Identity = 248/534 (46.44%), Postives = 332/534 (62.17%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRT------TSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTPS 528
            I    +SCIYGLG+PS+YL ASI   VG   D   R + + L    +      E       RG FR     V G V+E+GPA ++ I+RI                   GD+ + I+ +                                PI  +    ++A  +YPA+H V       +   AI  E+ ER  +L RE ++LEA+RL QRT  DL ++  VG C G+ENY+RHLAGR  G PPE L+DYFPQD WLL++DESHV+ PQL  M+ GDR+RK  L+EHGFRLPSA DNRPLKAEEFW K N+ IFVSATPG +ELE+S+ G  ++ SDG   +      T  +V  + VIRPTG+ DP + +RP+ GQ+ DL+ E + R Q  ER LVT LTKRMAEDL  +L E+ +   YLHS +  + R+E+L+ LR+G+ DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A+LYAD +T SM+RA++ET+RRR IQ+++N+ HG+TP+
Sbjct:  136 IVVASISCIYGLGIPSEYLNASIPFKVGMEADQ--RQILRDLASVQY------ERNDLDIGRGKFR-----VKGDVLEIGPAYEDRIIRIEF----------------FGDEIDAIRYI-------------------------------DPITGETLQSMDALNVYPARHFVTPEDRLEEACNAIEEELRERLVELERENKLLEAQRLEQRTRYDLEMLREVGYCNGVENYARHLAGRPAGSPPECLVDYFPQD-WLLVIDESHVTIPQLRGMYNGDRSRKMTLIEHGFRLPSAADNRPLKAEEFWQKVNQCIFVSATPGTWELEVSD-GKFEVQSDGKGESKFYVPGTGRVV--EQVIRPTGVVDPEISVRPTDGQIDDLLHEIQERVQLNERTLVTTLTKRMAEDLTEYLQERAIRVRYLHSEINSIERIEILQDLRQGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAILYADTLTDSMERAISETERRRKIQLEYNEKHGITPT 605          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI0019FDE9AF (Excinuclease ABC subunit UvrB n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019FDE9AF)

HSP 1 Score: 438 bits (1126), Expect = 3.830e-142
Identity = 249/538 (46.28%), Postives = 335/538 (62.27%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNA---RGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP-SVARAAS 534
            I    +SCIYGLG+PS+YL+ASI + VG+            ++Q+      V+ +  R++    RG FR   D     V+E+GPA ++ I+R+                   GD+ E I+ +                                P+  +    V+A  IYPA+H V    +  + + AI  E+EER  +L REG++LEA+RL QRT  DL ++  VG C GIENYSRHL GR  GEPPE LIDYFP+D WLL++DESHV+ PQ+  M+ GD+ARK  L+EHGFRLPSA DNRPLKAEEFW K N+ IF+SATPG +E+E+S    ++ I                 IRPTGI DP + +RP++GQ+ DL+ E K R  R ERVLVT LTKRMAEDL  +L E+ +   YLHS +  + R+E+L+ LR+G  DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ AL+QTIGRA RH  G+A+LYAD +T SM +A+ ET+RRR+IQ+ +N+LHG+TP SV + +S
Sbjct:  137 IVVASISCIYGLGIPSEYLKASIPLRVGEE-----------INQRQLLRELVSIQYSRNDTDLGRGRFRLKGD-----VLEIGPAYEDRIIRVEF----------------FGDEIEAIRYI-------------------------------DPVNGKILQSVDALNIYPARHFVTPEEQLKKAIIAIKQELEERLQELKREGKLLEAQRLEQRTLYDLEMLQEVGYCNGIENYSRHLTGRKAGEPPECLIDYFPKD-WLLVIDESHVTVPQIRGMYNGDKARKKVLIEHGFRLPSAADNRPLKAEEFWEKVNQCIFISATPGDWEIEVSEGRVVEQI-----------------IRPTGIVDPEIFVRPTEGQIDDLLAEIKERVARNERVLVTTLTKRMAEDLTEYLQERLIRVRYLHSDIDSIERIEILQDLREGNFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERALIQTIGRAARHVRGQAILYADNLTESMMKAIQETERRRNIQLAYNRLHGITPQSVMKKSS 593          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A1E5QJE4_9CYAN (UvrABC system protein B n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QJE4_9CYAN)

HSP 1 Score: 437 bits (1125), Expect = 5.090e-142
Identity = 251/527 (47.63%), Postives = 335/527 (63.57%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 527
            I    +SCIYGLG+PS+YL+ASI + +G+  +   R L + L   + YS   N+ E     RG FR     V G V+E+GPA ++ IVR+                   GD+ E I+ V                                P+  +    ++A  IYPA+H V       +   AI AE++ER  QL  EG++LEA+RL QRT+ DL L+  VG C G+ENYSRHLAGR  GEPPE LIDYFP+D WLL++DESHV+ PQ+  M+ GD++RK  L++HGFRLPSA DNRPLKAEEFW+K N+ IFVSATPG +E+E S+ G +                 + VIRPTG+ DP + +RP++GQV DL+ E K R +R+ERV+VT LTKRMAEDL  +L E+G+   YLHS ++ + R+E+++ LR GE DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A+LY D +T SM +A+ ET+RRR IQ  +NKLHG+TP
Sbjct:  136 IVVASISCIYGLGMPSEYLKASIPLRMGKELNQ--RELLRDL-ASIQYSR--NDMEM---GRGKFR-----VRGDVLEIGPAYEDRIVRVEF----------------FGDEIEAIRYV-------------------------------DPVTGEILQSMDALNIYPARHFVTPEERLEEACYAIEAELKERLIQLESEGKLLEAQRLEQRTKYDLELLREVGYCNGVENYSRHLAGRQAGEPPECLIDYFPKD-WLLVIDESHVTIPQIRGMYNGDQSRKRVLIDHGFRLPSAADNRPLKAEEFWTKVNQCIFVSATPGNWEIEQSD-GRI----------------VEQVIRPTGVIDPEIFVRPTEGQVDDLLGEIKERIKRDERVMVTTLTKRMAEDLTEYLQERGIKVRYLHSEIQSIERIEIIQALRNGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAILYGDNLTDSMIKAMEETERRRGIQTAYNKLHGITP 584          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A7S2S9Y7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Y7_9STRA)

HSP 1 Score: 437 bits (1123), Expect = 1.290e-141
Identity = 234/414 (56.52%), Postives = 293/414 (70.77%), Query Frame = 0
Query:  161 VEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELS--NPGNLQMISDGIDRTTSDLV------------------------------------DAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTPSVARAASVG 536
            +++ V+YPA+HHV+  GE+ QILA I  E++ERC +L    + LEA RLRQRTEND++++  V TCKG+ENYSRHLA R PGEPP+ L+DYFP+D WLL+VDESHV+APQ+  MF GDR RKA LV+HGFRLPSALDNRPL A EFW K ++ +FVSATPGKFE +LS  + G+ +  ++ +    + +V                                    DA+A+IRPTG+ DP V +RPS GQ+ DL+ E   R  R+ERVLVT LTKRM+EDL A+L +QGV T YLHS VKP+ RL++L+ LR G +DV+VGVNLLREGLNLPEVSLV +LDAD EGFLRSDTAL+QTIGRATR+  G+AVLYAD +T SMQRAL ET RRR +Q   N+ HG+ P  AR    G
Sbjct:   46 LQSFVLYPARHHVLEDGEKEQILADIELELQERCAELEAMSKSLEASRLRQRTENDIMMLQLVDTCKGVENYSRHLARRKPGEPPDCLVDYFPRD-WLLLVDESHVTAPQIKGMFEGDRQRKASLVKHGFRLPSALDNRPLTALEFWGKVHQCVFVSATPGKFEKDLSMRSQGSGRPRAEDVAAAVACIVPEDKALGAGGRRARGVGANGGLLAPGPRGDMETPWWDAEAIIRPTGVLDPEVLVRPSSGQIDDLMGEILDRRARQERVLVTTLTKRMSEDLTAYLKDQGVKTGYLHSDVKPIARLQVLKDLRDGTIDVLVGVNLLREGLNLPEVSLVAILDADKEGFLRSDTALIQTIGRATRNIHGQAVLYADIVTGSMQRALDETARRRALQDAFNREHGLVPRPARHLGEG 458          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI001689F5D6 (excinuclease ABC subunit UvrB n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001689F5D6)

HSP 1 Score: 436 bits (1122), Expect = 1.520e-141
Identity = 253/544 (46.51%), Postives = 337/544 (61.95%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSN---ARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP-SVARAASVGDSLL 540
            I    +SCIYGLG+PS+YL+ASI + VG             ++Q+         +  R++    RG FR     V G V+E+GPA ++ I+R+                   GD+ + I+ +                                P+       VEA  IYPA+H V           AI +E+EER  +L +EG++LEA+RL QR   DL ++  VG C G+ENYSRHLAGR  GEPPE LIDYFP+D WLL++DESHVS PQ+ AM+ GD+ARK  L+EHGFRLPSA DNRPLKA+EFW K N+ IFVSATPG +E+E S  G++                A+ VIRPTG+ DP + +RP+ GQ+ DL+ E K R  R+ER LVT LTKRMAEDL  +L E+G+   YLHS ++ + R+E+L+ LR+GE DV++GVNLLREGL+LPEVSLV +LDAD EGFLR+  +L+QTIGRA RH  G+A+LYAD +T SM +A+ ETDRRR IQ  +NKLHG+TP S+A+ +  G+++L
Sbjct:  136 IVVASISCIYGLGIPSEYLKASIPLKVGNE-----------VNQRQLLRDLAGVQYTRNDLDLGRGRFR-----VKGDVLEIGPAYEDRIIRVEF----------------FGDEIDAIRYL-------------------------------DPVTGNILQSVEALNIYPARHFVTPQDRLDIACQAIESELEERLEELQKEGKLLEAQRLEQRARYDLEMLREVGYCNGVENYSRHLAGRIAGEPPECLIDYFPKD-WLLVIDESHVSVPQIRAMYNGDQARKKVLIEHGFRLPSAADNRPLKADEFWEKVNQCIFVSATPGDWEIEKSE-GHV----------------AEQVIRPTGVIDPEIFVRPTSGQIDDLLGEIKDRVDRKERTLVTTLTKRMAEDLTEYLQERGIKVRYLHSEIQSIERIEILQALREGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAARSLIQTIGRAARHVQGQAILYADNLTDSMIKAIDETDRRRGIQTAYNKLHGITPQSIAKKS--GNAIL 596          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI0008F9A26E (excinuclease ABC subunit UvrB n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9A26E)

HSP 1 Score: 436 bits (1121), Expect = 2.020e-141
Identity = 248/527 (47.06%), Postives = 329/527 (62.43%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 527
            I    +SCIYGLG+PS+YL AS+R+ VG   D   R L + L  K+ YS   N+ E +   RG FR     V G V+E+GPA ++ IVR+                   GD+ + I+ +                                P+  +    ++   IYPA H V    +  Q   +I AE+EER  +L  +G+++EA+RL+QRT  DL ++  VG C+G+ENYSRHLA R PG+PPE L+DYFP D+WLL VDESHV+ PQL  M+ GD++RK  LVEHGFRLPSA DNRPL+AEEFW K N+ IFVSATPG +E+E S    ++ I                 IRPTG+ DP + +RP++GQV DL  E + R  R ERVLVT LTKRMAEDL  +L E  V   Y+HS +  + R+E+LR LR+G  DV+VGVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A++YAD MT SM++A+AET+RRR IQ+++N+ H +TP
Sbjct:  136 IVVASISCIYGLGIPSEYLRASVRLQVGMERDQ--RQLLRDL-AKIQYSR--NDTELQ---RGRFR-----VKGDVLEIGPAYEDRIVRVEF----------------FGDEIDAIRYI-------------------------------DPVTGKTTNSLQGINIYPATHFVTPEEQLDQACQSIEAELEERVAELENQGKLVEAQRLKQRTRYDLEMLREVGFCQGVENYSRHLARRNPGDPPECLVDYFP-DDWLLFVDESHVTVPQLRGMYNGDQSRKRVLVEHGFRLPSAADNRPLRAEEFWQKVNQCIFVSATPGDWEVEQSGGEVVEQI-----------------IRPTGVVDPEIAVRPTEGQVDDLYGEIQERASRSERVLVTTLTKRMAEDLTEYLQEHQVRVRYMHSEINAIERIEILRDLRQGTFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVNGQAIMYADTMTESMEKAIAETERRRKIQLEYNRQHNITP 584          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI00034B0E32 (excinuclease ABC subunit UvrB n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00034B0E32)

HSP 1 Score: 436 bits (1120), Expect = 2.850e-141
Identity = 243/530 (45.85%), Postives = 329/530 (62.08%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSN---ARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 527
            I    +SCIYGLG+PS+YL+ASI + VG+            L+Q+       + +  R++    RG FR     V G V+E+GPA ++ I+R+                   GD+ + I+ +                                P+        +A  IYPA+H V       +   AI  E+EER  +L REG++LEA+RL QRT  DL ++  VG C G+ENYSRHLAGR  GEPPE LIDYFP+D WLL++DESHV+ PQ+  M+ GD++RK  LV+HGFRLPSA DNRPLKAEEFW K  + +FVSATPG +ELE+S  G +                A+ +IRPTG+ DP + +RP++GQ+ DL+ E K R  R ER LVT LTKRMAEDL  +L E+G+   YLHS ++ + R+E+L+ LR+G+ DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A++YAD +T SM++A+ ETDRRR IQ+ HN+ HG+TP
Sbjct:  136 IVVASISCIYGLGIPSEYLKASIPLRVGEE-----------LNQRQLLRDLASVQYSRNDLELTRGRFR-----VKGDVLEIGPAYEDRIIRVEF----------------FGDEIDAIRYI-------------------------------DPVTGSILQSTDALNIYPARHFVTPEDRLQEACEAIREELEERLEELRREGKLLEAQRLEQRTRYDLEMLQEVGYCNGVENYSRHLAGRKAGEPPECLIDYFPKD-WLLVIDESHVTVPQIRGMYNGDQSRKKVLVDHGFRLPSAADNRPLKAEEFWQKVKQCVFVSATPGDWELEISE-GRI----------------AEQIIRPTGVVDPEIFVRPTEGQIDDLLGEIKDRVSRGERALVTTLTKRMAEDLTEYLQERGIRVRYLHSDIQSIERIEILQALREGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAIMYADNLTDSMKKAIDETDRRRGIQVAHNRTHGITP 584          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: K9SYE8_9SYNE (UvrABC system protein B n=1 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9SYE8_9SYNE)

HSP 1 Score: 435 bits (1118), Expect = 6.210e-141
Identity = 251/537 (46.74%), Postives = 332/537 (61.82%), Query Frame = 0
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP-SVARAASVG 536
            I    +SCIYGLG+P +YL+ASI + VG  +D   R L + L    +   + N+ E     RG FR     V G ++E+GPA ++ I+R+                   GD+ E I+ V                                PI  +    +E   IYPAKH V       + +A I  EM+ER  +L +E ++LEA+RL QRT  DL L+  VG C G+ENYSRHLAGR  G+PP  L+DYFP DNWLL+VDESHVS PQL  M+ GD+ARK  L++HGFRLPSA DNRPLK++EF SK N+ IFVSATPG +ELE+S     Q++              Q +IRPTGI DP V +RP +GQV DL+ E K R  + ERVL+T LTKRMAEDL  +  E+ +   YLHS +K + R+E+L+ LR+GE DV++GVNLLREGL+LPEVSLV +LDAD EGFLRS+ +L+QTIGRA R+  G+ ++YADR+T SM+ A+ ET RRR IQ++HN  HG+TP S+ + ++ G
Sbjct:  136 IVVASISCIYGLGMPEEYLKASIPLRVGTTFDP--RELLKDLTAVQY---ERNDLEL---GRGKFR-----VRGDIIEIGPAYEDRIIRVEF----------------FGDEIEAIRYV-------------------------------DPITGEILLSLEGLNIYPAKHFVTPEDRLQEAIANIRTEMDERIDELTKENKLLEAQRLEQRTRYDLELLSEVGFCNGVENYSRHLAGRNAGDPPSCLVDYFPLDNWLLVVDESHVSIPQLRGMYNGDQARKKVLIDHGFRLPSAADNRPLKSDEFLSKINQCIFVSATPGDWELEVSE----QVV--------------QQIIRPTGILDPEVFVRPIEGQVDDLLGEIKLRVSKNERVLITTLTKRMAEDLTTYFQERNINVKYLHSDIKSIERIEILQGLRQGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSNRSLIQTIGRAARNSNGQVIMYADRLTESMEYAINETARRRQIQLEHNLKHGITPKSIIKTSNNG 594          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A6P0KAB3_9CYAN (UvrABC system protein B n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A6P0KAB3_9CYAN)

HSP 1 Score: 434 bits (1117), Expect = 8.020e-141
Identity = 246/523 (47.04%), Postives = 322/523 (61.57%), Query Frame = 0
Query:    5 QVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 527
             +SCIYGLG+PS+YL+A+I + VG         + Q    +   S Q +  +     RG FR     V G V+E+GPA ++ I+R+                   GD+ + I+ +                                P+  +    +EA  +YPA+H V    +      AI  E+ ER  +L + G++LEA+RL QRT  DL ++  VG C G+ENYSRHLA R  GEPPE LIDYFPQD WLL+VDESHV+ PQ+  M+ GD+ARK  LVEHGFRLPSA DNRPLKAEEFW K N+ IFVSATPG +ELE S    +Q                  VIRPTG+ DP + +RP++GQV DL+ E K R  R ERVLVT LTKRMAEDL  +L E+ +   YLHS +K + R+E+++ L++GE DV+VGVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A+LYAD +T SM RA+ ETDRRR IQ+ +N++HG+TP
Sbjct:  140 SISCIYGLGMPSEYLKAAIPLRVGAE-------VNQRQILRDLASVQYSRNDLEMG-RGRFR-----VKGDVLEIGPAYEDRIIRVEF----------------FGDEIDAIRYIN-------------------------------PVTGEIIQTLEALNVYPARHFVTPDEQLESACDAIEKELHERLQELEKAGKLLEAQRLEQRTRYDLEMLREVGYCNGVENYSRHLAARKAGEPPECLIDYFPQD-WLLVVDESHVTVPQIRGMYNGDQARKRVLVEHGFRLPSAADNRPLKAEEFWKKVNQCIFVSATPGDWELEQSEDKIIQQ-----------------VIRPTGVVDPEIFVRPTEGQVDDLLAEIKERANRNERVLVTTLTKRMAEDLTEYLEERAIRVRYLHSEIKSIERIEIIQALQEGEFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAILYADNLTGSMTRAIEETDRRRGIQLAYNRMHGITP 584          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K835_9PHAE1.610e-27566.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0019DB6CB03.380e-14246.44Excinuclease ABC subunit UvrB n=1 Tax=Synechococca... [more]
UPI0019FDE9AF3.830e-14246.28Excinuclease ABC subunit UvrB n=1 Tax=Oscillatoria... [more]
A0A1E5QJE4_9CYAN5.090e-14247.63UvrABC system protein B n=2 Tax=unclassified Deser... [more]
A0A7S2S9Y7_9STRA1.290e-14156.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI001689F5D61.520e-14146.51excinuclease ABC subunit UvrB n=2 Tax=unclassified... [more]
UPI0008F9A26E2.020e-14147.06excinuclease ABC subunit UvrB n=1 Tax=Geitlerinema... [more]
UPI00034B0E322.850e-14145.85excinuclease ABC subunit UvrB n=1 Tax=Oscillatoria... [more]
K9SYE8_9SYNE6.210e-14146.74UvrABC system protein B n=1 Tax=Synechococcus sp. ... [more]
A0A6P0KAB3_9CYAN8.020e-14147.04UvrABC system protein B n=5 Tax=Cyanobacteria TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 401..487
e-value: 2.3E-16
score: 70.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 383..486
e-value: 1.5E-14
score: 54.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 372..533
score: 17.844
IPR024759UvrB, YAD/RRR-motif-containing domainPFAMPF12344UvrBcoord: 493..528
e-value: 9.6E-17
score: 60.6
NoneNo IPR availableGENE3D3.40.50.300coord: 356..530
e-value: 2.7E-44
score: 152.4
NoneNo IPR availableGENE3D3.40.50.300coord: 200..337
e-value: 1.2E-45
score: 157.8
NoneNo IPR availablePANTHERPTHR24029:SF0UVRABC SYSTEM PROTEIN Bcoord: 6..639
IPR004807UvrABC system, subunit BPANTHERPTHR24029FAMILY NOT NAMEDcoord: 6..639
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 253..506
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 159..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15557contigH-elongata_contig15557:242..7438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15557.3643.1mRNA_H-elongata_contig15557.3643.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15557 242..7438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15557.3643.1 ID=prot_H-elongata_contig15557.3643.1|Name=mRNA_H-elongata_contig15557.3643.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=646bp
ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSP
QVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVER
IQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGK
TPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGRE
GRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLID
YFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRP
LKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDA
QAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMA
EDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREG
LNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTP
SMQRALAETDRRRDIQMKHNKLHGVTPSVARAASVGDSLLDSTLRDDTNT
INATRSGRGQDRGRSRYGGNNVIASARTGTVGDDGITTGDKQLTSLAATR
DTCHALDRLAEQAAAKMAKAARKTDFKEAALWRDRRDALLASMQDL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR024759UvrB_YAD/RRR_dom
IPR004807UvrB
IPR027417P-loop_NTPase