mRNA_H-elongata_contig15557.3643.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15557.3643.1
Unique NamemRNA_H-elongata_contig15557.3643.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A6H5K835_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K835_9PHAE)

HSP 1 Score: 791 bits (2042), Expect = 1.610e-275
Identity = 438/661 (66.26%), Postives = 505/661 (76.40%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPL-GLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLRE--GLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTPSVARAASVGDSLLDSTLRDDTNTINATRSGRGQDRGRSRYGGNNVIASARTGTVGDD------------GITTGDKQLTSLAATRDTCHALDRLAEQAAAKMAKAARKTDFKEAALWRDRRDALLASMQDL 1938
            I    VSCIYGLG+PSKYLEASIRI+VGQ W  GWR LA+HL+Q LFY P+ N EEF +  RGSFRS   + GGGV+E+GPA+DEA+VR+ +D+AG+V RIQV+  V  G K    K    E  P   L  +L     G         D     +     DV+AHVIYPAKHHV+G GE   +++ IS EMEERC QLG  G++LEAERLRQRTENDLLL+GAVGTCKG+ENYSRHLAGRGPG+PPETL+DYFP++ WLLIVDESHVSAPQLGAM+GGD+ARK KLVEHGFRLPSALDNRPLKA+EFWSK +K+IFVSATPGKFELEL+  G  +    G D    DLVDAQAVIRPTGITDPPVDIRPSKGQVSD+VQECK RG R ERVLVTALTK+MAEDL AFL+EQGVPTAYLHSGVKPM RLELLRQLR GE+DVIVGVNLLRE  GLNLPEVSLVC+LDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADR+TPSM+RALAETDRRR+IQ +HNKLHG+TPSVA+AASVGDS+LDS   D    ++  R G        RY  ++ +AS    ++  D            G  +  +  + L  + DT  AL RLAEQA+ KM+ AA KTDFKEAALWRDRRDALL+++  +
Sbjct:  362 IVVASVSCIYGLGMPSKYLEASIRIIVGQEWTDGWRALAKHLEQGLFYIPKHNREEFEALPRGSFRSVFAEGGGGVIEIGPASDEAVVRVTLDAAGVVRRIQVVPIV-GGGKTRADK----EREPHHDLSDLLTAPDRG--------HDKPLVGSEPALDDVDAHVIYPAKHHVVGRGEMEDVMSKISEEMEERCSQLGLGGKILEAERLRQRTENDLLLLGAVGTCKGVENYSRHLAGRGPGDPPETLVDYFPENEWLLIVDESHVSAPQLGAMWGGDQARKKKLVEHGFRLPSALDNRPLKADEFWSKVDKTIFVSATPGKFELELATLGAGKSGGLGWDEI-GDLVDAQAVIRPTGITDPPVDIRPSKGQVSDMVQECKTRGGRGERVLVTALTKQMAEDLSAFLMEQGVPTAYLHSGVKPMQRLELLRQLRSGEIDVIVGVNLLREARGLNLPEVSLVCILDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRITPSMERALAETDRRREIQTRHNKLHGITPSVAKAASVGDSILDSINGD---AVHTQREG--------RYSSSDHVASWANHSLLPDQVQLLYDLAAQNGKGSAHQHKSLLTPSEDTTRALMRLAEQASTKMSSAATKTDFKEAALWRDRRDALLSTLSTI 997          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI0019DB6CB0 (Excinuclease ABC subunit UvrB n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019DB6CB0)

HSP 1 Score: 439 bits (1128), Expect = 3.380e-142
Identity = 248/534 (46.44%), Postives = 332/534 (62.17%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRT------TSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTPS 1584
            I    +SCIYGLG+PS+YL ASI   VG   D   R + + L    +      E       RG FR     V G V+E+GPA ++ I+RI                   GD+ + I+ +                                PI  +    ++A  +YPA+H V       +   AI  E+ ER  +L RE ++LEA+RL QRT  DL ++  VG C G+ENY+RHLAGR  G PPE L+DYFPQD WLL++DESHV+ PQL  M+ GDR+RK  L+EHGFRLPSA DNRPLKAEEFW K N+ IFVSATPG +ELE+S+ G  ++ SDG   +      T  +V  + VIRPTG+ DP + +RP+ GQ+ DL+ E + R Q  ER LVT LTKRMAEDL  +L E+ +   YLHS +  + R+E+L+ LR+G+ DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A+LYAD +T SM+RA++ET+RRR IQ+++N+ HG+TP+
Sbjct:  136 IVVASISCIYGLGIPSEYLNASIPFKVGMEADQ--RQILRDLASVQY------ERNDLDIGRGKFR-----VKGDVLEIGPAYEDRIIRIEF----------------FGDEIDAIRYI-------------------------------DPITGETLQSMDALNVYPARHFVTPEDRLEEACNAIEEELRERLVELERENKLLEAQRLEQRTRYDLEMLREVGYCNGVENYARHLAGRPAGSPPECLVDYFPQD-WLLVIDESHVTIPQLRGMYNGDRSRKMTLIEHGFRLPSAADNRPLKAEEFWQKVNQCIFVSATPGTWELEVSD-GKFEVQSDGKGESKFYVPGTGRVV--EQVIRPTGVVDPEISVRPTDGQIDDLLHEIQERVQLNERTLVTTLTKRMAEDLTEYLQERAIRVRYLHSEINSIERIEILQDLRQGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAILYADTLTDSMERAISETERRRKIQLEYNEKHGITPT 605          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI0019FDE9AF (Excinuclease ABC subunit UvrB n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019FDE9AF)

HSP 1 Score: 438 bits (1126), Expect = 3.830e-142
Identity = 249/538 (46.28%), Postives = 335/538 (62.27%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNA---RGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP-SVARAAS 1602
            I    +SCIYGLG+PS+YL+ASI + VG+            ++Q+      V+ +  R++    RG FR   D     V+E+GPA ++ I+R+                   GD+ E I+ +                                P+  +    V+A  IYPA+H V    +  + + AI  E+EER  +L REG++LEA+RL QRT  DL ++  VG C GIENYSRHL GR  GEPPE LIDYFP+D WLL++DESHV+ PQ+  M+ GD+ARK  L+EHGFRLPSA DNRPLKAEEFW K N+ IF+SATPG +E+E+S    ++ I                 IRPTGI DP + +RP++GQ+ DL+ E K R  R ERVLVT LTKRMAEDL  +L E+ +   YLHS +  + R+E+L+ LR+G  DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ AL+QTIGRA RH  G+A+LYAD +T SM +A+ ET+RRR+IQ+ +N+LHG+TP SV + +S
Sbjct:  137 IVVASISCIYGLGIPSEYLKASIPLRVGEE-----------INQRQLLRELVSIQYSRNDTDLGRGRFRLKGD-----VLEIGPAYEDRIIRVEF----------------FGDEIEAIRYI-------------------------------DPVNGKILQSVDALNIYPARHFVTPEEQLKKAIIAIKQELEERLQELKREGKLLEAQRLEQRTLYDLEMLQEVGYCNGIENYSRHLTGRKAGEPPECLIDYFPKD-WLLVIDESHVTVPQIRGMYNGDKARKKVLIEHGFRLPSAADNRPLKAEEFWEKVNQCIFISATPGDWEIEVSEGRVVEQI-----------------IRPTGIVDPEIFVRPTEGQIDDLLAEIKERVARNERVLVTTLTKRMAEDLTEYLQERLIRVRYLHSDIDSIERIEILQDLREGNFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERALIQTIGRAARHVRGQAILYADNLTESMMKAIQETERRRNIQLAYNRLHGITPQSVMKKSS 593          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A1E5QJE4_9CYAN (UvrABC system protein B n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QJE4_9CYAN)

HSP 1 Score: 437 bits (1125), Expect = 5.090e-142
Identity = 251/527 (47.63%), Postives = 335/527 (63.57%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 1581
            I    +SCIYGLG+PS+YL+ASI + +G+  +   R L + L   + YS   N+ E     RG FR     V G V+E+GPA ++ IVR+                   GD+ E I+ V                                P+  +    ++A  IYPA+H V       +   AI AE++ER  QL  EG++LEA+RL QRT+ DL L+  VG C G+ENYSRHLAGR  GEPPE LIDYFP+D WLL++DESHV+ PQ+  M+ GD++RK  L++HGFRLPSA DNRPLKAEEFW+K N+ IFVSATPG +E+E S+ G +                 + VIRPTG+ DP + +RP++GQV DL+ E K R +R+ERV+VT LTKRMAEDL  +L E+G+   YLHS ++ + R+E+++ LR GE DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A+LY D +T SM +A+ ET+RRR IQ  +NKLHG+TP
Sbjct:  136 IVVASISCIYGLGMPSEYLKASIPLRMGKELNQ--RELLRDL-ASIQYSR--NDMEM---GRGKFR-----VRGDVLEIGPAYEDRIVRVEF----------------FGDEIEAIRYV-------------------------------DPVTGEILQSMDALNIYPARHFVTPEERLEEACYAIEAELKERLIQLESEGKLLEAQRLEQRTKYDLELLREVGYCNGVENYSRHLAGRQAGEPPECLIDYFPKD-WLLVIDESHVTIPQIRGMYNGDQSRKRVLIDHGFRLPSAADNRPLKAEEFWTKVNQCIFVSATPGNWEIEQSD-GRI----------------VEQVIRPTGVIDPEIFVRPTEGQVDDLLGEIKERIKRDERVMVTTLTKRMAEDLTEYLQERGIKVRYLHSEIQSIERIEIIQALRNGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAILYGDNLTDSMIKAMEETERRRGIQTAYNKLHGITP 584          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A7S2S9Y7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Y7_9STRA)

HSP 1 Score: 437 bits (1123), Expect = 1.290e-141
Identity = 234/414 (56.52%), Postives = 293/414 (70.77%), Query Frame = 1
Query:  481 VEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELS--NPGNLQMISDGIDRTTSDLV------------------------------------DAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTPSVARAASVG 1608
            +++ V+YPA+HHV+  GE+ QILA I  E++ERC +L    + LEA RLRQRTEND++++  V TCKG+ENYSRHLA R PGEPP+ L+DYFP+D WLL+VDESHV+APQ+  MF GDR RKA LV+HGFRLPSALDNRPL A EFW K ++ +FVSATPGKFE +LS  + G+ +  ++ +    + +V                                    DA+A+IRPTG+ DP V +RPS GQ+ DL+ E   R  R+ERVLVT LTKRM+EDL A+L +QGV T YLHS VKP+ RL++L+ LR G +DV+VGVNLLREGLNLPEVSLV +LDAD EGFLRSDTAL+QTIGRATR+  G+AVLYAD +T SMQRAL ET RRR +Q   N+ HG+ P  AR    G
Sbjct:   46 LQSFVLYPARHHVLEDGEKEQILADIELELQERCAELEAMSKSLEASRLRQRTENDIMMLQLVDTCKGVENYSRHLARRKPGEPPDCLVDYFPRD-WLLLVDESHVTAPQIKGMFEGDRQRKASLVKHGFRLPSALDNRPLTALEFWGKVHQCVFVSATPGKFEKDLSMRSQGSGRPRAEDVAAAVACIVPEDKALGAGGRRARGVGANGGLLAPGPRGDMETPWWDAEAIIRPTGVLDPEVLVRPSSGQIDDLMGEILDRRARQERVLVTTLTKRMSEDLTAYLKDQGVKTGYLHSDVKPIARLQVLKDLRDGTIDVLVGVNLLREGLNLPEVSLVAILDADKEGFLRSDTALIQTIGRATRNIHGQAVLYADIVTGSMQRALDETARRRALQDAFNREHGLVPRPARHLGEG 458          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI001689F5D6 (excinuclease ABC subunit UvrB n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001689F5D6)

HSP 1 Score: 436 bits (1122), Expect = 1.520e-141
Identity = 253/544 (46.51%), Postives = 337/544 (61.95%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSN---ARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP-SVARAASVGDSLL 1620
            I    +SCIYGLG+PS+YL+ASI + VG             ++Q+         +  R++    RG FR     V G V+E+GPA ++ I+R+                   GD+ + I+ +                                P+       VEA  IYPA+H V           AI +E+EER  +L +EG++LEA+RL QR   DL ++  VG C G+ENYSRHLAGR  GEPPE LIDYFP+D WLL++DESHVS PQ+ AM+ GD+ARK  L+EHGFRLPSA DNRPLKA+EFW K N+ IFVSATPG +E+E S  G++                A+ VIRPTG+ DP + +RP+ GQ+ DL+ E K R  R+ER LVT LTKRMAEDL  +L E+G+   YLHS ++ + R+E+L+ LR+GE DV++GVNLLREGL+LPEVSLV +LDAD EGFLR+  +L+QTIGRA RH  G+A+LYAD +T SM +A+ ETDRRR IQ  +NKLHG+TP S+A+ +  G+++L
Sbjct:  136 IVVASISCIYGLGIPSEYLKASIPLKVGNE-----------VNQRQLLRDLAGVQYTRNDLDLGRGRFR-----VKGDVLEIGPAYEDRIIRVEF----------------FGDEIDAIRYL-------------------------------DPVTGNILQSVEALNIYPARHFVTPQDRLDIACQAIESELEERLEELQKEGKLLEAQRLEQRARYDLEMLREVGYCNGVENYSRHLAGRIAGEPPECLIDYFPKD-WLLVIDESHVSVPQIRAMYNGDQARKKVLIEHGFRLPSAADNRPLKADEFWEKVNQCIFVSATPGDWEIEKSE-GHV----------------AEQVIRPTGVIDPEIFVRPTSGQIDDLLGEIKDRVDRKERTLVTTLTKRMAEDLTEYLQERGIKVRYLHSEIQSIERIEILQALREGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAARSLIQTIGRAARHVQGQAILYADNLTDSMIKAIDETDRRRGIQTAYNKLHGITPQSIAKKS--GNAIL 596          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI0008F9A26E (excinuclease ABC subunit UvrB n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9A26E)

HSP 1 Score: 436 bits (1121), Expect = 2.020e-141
Identity = 248/527 (47.06%), Postives = 329/527 (62.43%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 1581
            I    +SCIYGLG+PS+YL AS+R+ VG   D   R L + L  K+ YS   N+ E +   RG FR     V G V+E+GPA ++ IVR+                   GD+ + I+ +                                P+  +    ++   IYPA H V    +  Q   +I AE+EER  +L  +G+++EA+RL+QRT  DL ++  VG C+G+ENYSRHLA R PG+PPE L+DYFP D+WLL VDESHV+ PQL  M+ GD++RK  LVEHGFRLPSA DNRPL+AEEFW K N+ IFVSATPG +E+E S    ++ I                 IRPTG+ DP + +RP++GQV DL  E + R  R ERVLVT LTKRMAEDL  +L E  V   Y+HS +  + R+E+LR LR+G  DV+VGVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A++YAD MT SM++A+AET+RRR IQ+++N+ H +TP
Sbjct:  136 IVVASISCIYGLGIPSEYLRASVRLQVGMERDQ--RQLLRDL-AKIQYSR--NDTELQ---RGRFR-----VKGDVLEIGPAYEDRIVRVEF----------------FGDEIDAIRYI-------------------------------DPVTGKTTNSLQGINIYPATHFVTPEEQLDQACQSIEAELEERVAELENQGKLVEAQRLKQRTRYDLEMLREVGFCQGVENYSRHLARRNPGDPPECLVDYFP-DDWLLFVDESHVTVPQLRGMYNGDQSRKRVLVEHGFRLPSAADNRPLRAEEFWQKVNQCIFVSATPGDWEVEQSGGEVVEQI-----------------IRPTGVVDPEIAVRPTEGQVDDLYGEIQERASRSERVLVTTLTKRMAEDLTEYLQEHQVRVRYMHSEINAIERIEILRDLRQGTFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVNGQAIMYADTMTESMEKAIAETERRRKIQLEYNRQHNITP 584          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: UPI00034B0E32 (excinuclease ABC subunit UvrB n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00034B0E32)

HSP 1 Score: 436 bits (1120), Expect = 2.850e-141
Identity = 243/530 (45.85%), Postives = 329/530 (62.08%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSN---ARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 1581
            I    +SCIYGLG+PS+YL+ASI + VG+            L+Q+       + +  R++    RG FR     V G V+E+GPA ++ I+R+                   GD+ + I+ +                                P+        +A  IYPA+H V       +   AI  E+EER  +L REG++LEA+RL QRT  DL ++  VG C G+ENYSRHLAGR  GEPPE LIDYFP+D WLL++DESHV+ PQ+  M+ GD++RK  LV+HGFRLPSA DNRPLKAEEFW K  + +FVSATPG +ELE+S  G +                A+ +IRPTG+ DP + +RP++GQ+ DL+ E K R  R ER LVT LTKRMAEDL  +L E+G+   YLHS ++ + R+E+L+ LR+G+ DV++GVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A++YAD +T SM++A+ ETDRRR IQ+ HN+ HG+TP
Sbjct:  136 IVVASISCIYGLGIPSEYLKASIPLRVGEE-----------LNQRQLLRDLASVQYSRNDLELTRGRFR-----VKGDVLEIGPAYEDRIIRVEF----------------FGDEIDAIRYI-------------------------------DPVTGSILQSTDALNIYPARHFVTPEDRLQEACEAIREELEERLEELRREGKLLEAQRLEQRTRYDLEMLQEVGYCNGVENYSRHLAGRKAGEPPECLIDYFPKD-WLLVIDESHVTVPQIRGMYNGDQSRKKVLVDHGFRLPSAADNRPLKAEEFWQKVKQCVFVSATPGDWELEISE-GRI----------------AEQIIRPTGVVDPEIFVRPTEGQIDDLLGEIKDRVSRGERALVTTLTKRMAEDLTEYLQERGIRVRYLHSDIQSIERIEILQALREGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAIMYADNLTDSMKKAIDETDRRRGIQVAHNRTHGITP 584          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: K9SYE8_9SYNE (UvrABC system protein B n=1 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9SYE8_9SYNE)

HSP 1 Score: 435 bits (1118), Expect = 6.210e-141
Identity = 251/537 (46.74%), Postives = 332/537 (61.82%), Query Frame = 1
Query:    1 ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP-SVARAASVG 1608
            I    +SCIYGLG+P +YL+ASI + VG  +D   R L + L    +   + N+ E     RG FR     V G ++E+GPA ++ I+R+                   GD+ E I+ V                                PI  +    +E   IYPAKH V       + +A I  EM+ER  +L +E ++LEA+RL QRT  DL L+  VG C G+ENYSRHLAGR  G+PP  L+DYFP DNWLL+VDESHVS PQL  M+ GD+ARK  L++HGFRLPSA DNRPLK++EF SK N+ IFVSATPG +ELE+S     Q++              Q +IRPTGI DP V +RP +GQV DL+ E K R  + ERVL+T LTKRMAEDL  +  E+ +   YLHS +K + R+E+L+ LR+GE DV++GVNLLREGL+LPEVSLV +LDAD EGFLRS+ +L+QTIGRA R+  G+ ++YADR+T SM+ A+ ET RRR IQ++HN  HG+TP S+ + ++ G
Sbjct:  136 IVVASISCIYGLGMPEEYLKASIPLRVGTTFDP--RELLKDLTAVQY---ERNDLEL---GRGKFR-----VRGDIIEIGPAYEDRIIRVEF----------------FGDEIEAIRYV-------------------------------DPITGEILLSLEGLNIYPAKHFVTPEDRLQEAIANIRTEMDERIDELTKENKLLEAQRLEQRTRYDLELLSEVGFCNGVENYSRHLAGRNAGDPPSCLVDYFPLDNWLLVVDESHVSIPQLRGMYNGDQARKKVLIDHGFRLPSAADNRPLKSDEFLSKINQCIFVSATPGDWELEVSE----QVV--------------QQIIRPTGILDPEVFVRPIEGQVDDLLGEIKLRVSKNERVLITTLTKRMAEDLTTYFQERNINVKYLHSDIKSIERIEILQGLRQGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSNRSLIQTIGRAARNSNGQVIMYADRLTESMEYAINETARRRQIQLEHNLKHGITPKSIIKTSNNG 594          
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Match: A0A6P0KAB3_9CYAN (UvrABC system protein B n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A6P0KAB3_9CYAN)

HSP 1 Score: 434 bits (1117), Expect = 8.020e-141
Identity = 246/523 (47.04%), Postives = 322/523 (61.57%), Query Frame = 1
Query:   13 QVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSPQVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVERIQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGKTPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGREGRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLIDYFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRPLKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDAQAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMAEDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREGLNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTPSMQRALAETDRRRDIQMKHNKLHGVTP 1581
             +SCIYGLG+PS+YL+A+I + VG         + Q    +   S Q +  +     RG FR     V G V+E+GPA ++ I+R+                   GD+ + I+ +                                P+  +    +EA  +YPA+H V    +      AI  E+ ER  +L + G++LEA+RL QRT  DL ++  VG C G+ENYSRHLA R  GEPPE LIDYFPQD WLL+VDESHV+ PQ+  M+ GD+ARK  LVEHGFRLPSA DNRPLKAEEFW K N+ IFVSATPG +ELE S    +Q                  VIRPTG+ DP + +RP++GQV DL+ E K R  R ERVLVT LTKRMAEDL  +L E+ +   YLHS +K + R+E+++ L++GE DV+VGVNLLREGL+LPEVSLV +LDAD EGFLR++ +L+QTIGRA RH  G+A+LYAD +T SM RA+ ETDRRR IQ+ +N++HG+TP
Sbjct:  140 SISCIYGLGMPSEYLKAAIPLRVGAE-------VNQRQILRDLASVQYSRNDLEMG-RGRFR-----VKGDVLEIGPAYEDRIIRVEF----------------FGDEIDAIRYIN-------------------------------PVTGEIIQTLEALNVYPARHFVTPDEQLESACDAIEKELHERLQELEKAGKLLEAQRLEQRTRYDLEMLREVGYCNGVENYSRHLAARKAGEPPECLIDYFPQD-WLLVVDESHVTVPQIRGMYNGDQARKRVLVEHGFRLPSAADNRPLKAEEFWKKVNQCIFVSATPGDWELEQSEDKIIQQ-----------------VIRPTGVVDPEIFVRPTEGQVDDLLAEIKERANRNERVLVTTLTKRMAEDLTEYLEERAIRVRYLHSEIKSIERIEIIQALQEGEFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVRGQAILYADNLTGSMTRAIEETDRRRGIQLAYNRMHGITP 584          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15557.3643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K835_9PHAE1.610e-27566.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0019DB6CB03.380e-14246.44Excinuclease ABC subunit UvrB n=1 Tax=Synechococca... [more]
UPI0019FDE9AF3.830e-14246.28Excinuclease ABC subunit UvrB n=1 Tax=Oscillatoria... [more]
A0A1E5QJE4_9CYAN5.090e-14247.63UvrABC system protein B n=2 Tax=unclassified Deser... [more]
A0A7S2S9Y7_9STRA1.290e-14156.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI001689F5D61.520e-14146.51excinuclease ABC subunit UvrB n=2 Tax=unclassified... [more]
UPI0008F9A26E2.020e-14147.06excinuclease ABC subunit UvrB n=1 Tax=Geitlerinema... [more]
UPI00034B0E322.850e-14145.85excinuclease ABC subunit UvrB n=1 Tax=Oscillatoria... [more]
K9SYE8_9SYNE6.210e-14146.74UvrABC system protein B n=1 Tax=Synechococcus sp. ... [more]
A0A6P0KAB3_9CYAN8.020e-14147.04UvrABC system protein B n=5 Tax=Cyanobacteria TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15557contigH-elongata_contig15557:242..7438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score808.5
Seed ortholog evalue2.2e-231
Seed eggNOG ortholog2880.D7FRM3
EggNOG free text desc.Type III restriction enzyme, res subunit
EggNOG OGs2QQZA@2759,COG0556@1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHelicase, C-terminal
Ec32 orthologEc-12_002510.1
Exons9
Model size1938
Cds size1938
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929918.1514497-CDS-H-elongata_contig15557:241..5221622929918.1514497-CDS-H-elongata_contig15557:241..522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 242..522 -
1691679207.850253-CDS-H-elongata_contig15557:241..5221691679207.850253-CDS-H-elongata_contig15557:241..522Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 242..522 -
1622929918.1959884-CDS-H-elongata_contig15557:1042..11461622929918.1959884-CDS-H-elongata_contig15557:1042..1146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 1043..1146 -
1691679207.8624506-CDS-H-elongata_contig15557:1042..11461691679207.8624506-CDS-H-elongata_contig15557:1042..1146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 1043..1146 -
1622929918.2093153-CDS-H-elongata_contig15557:2514..27201622929918.2093153-CDS-H-elongata_contig15557:2514..2720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 2515..2720 -
1691679207.8700273-CDS-H-elongata_contig15557:2514..27201691679207.8700273-CDS-H-elongata_contig15557:2514..2720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 2515..2720 -
1622929918.220986-CDS-H-elongata_contig15557:3315..34611622929918.220986-CDS-H-elongata_contig15557:3315..3461Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 3316..3461 -
1691679207.8776834-CDS-H-elongata_contig15557:3315..34611691679207.8776834-CDS-H-elongata_contig15557:3315..3461Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 3316..3461 -
1622929918.2314334-CDS-H-elongata_contig15557:4365..45311622929918.2314334-CDS-H-elongata_contig15557:4365..4531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 4366..4531 -
1691679207.885238-CDS-H-elongata_contig15557:4365..45311691679207.885238-CDS-H-elongata_contig15557:4365..4531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 4366..4531 -
1622929918.2441084-CDS-H-elongata_contig15557:4907..50361622929918.2441084-CDS-H-elongata_contig15557:4907..5036Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 4908..5036 -
1691679207.8928478-CDS-H-elongata_contig15557:4907..50361691679207.8928478-CDS-H-elongata_contig15557:4907..5036Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 4908..5036 -
1622929918.2560968-CDS-H-elongata_contig15557:5226..54511622929918.2560968-CDS-H-elongata_contig15557:5226..5451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 5227..5451 -
1691679207.9033182-CDS-H-elongata_contig15557:5226..54511691679207.9033182-CDS-H-elongata_contig15557:5226..5451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 5227..5451 -
1622929918.26882-CDS-H-elongata_contig15557:6440..69891622929918.26882-CDS-H-elongata_contig15557:6440..6989Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 6441..6989 -
1691679207.9141326-CDS-H-elongata_contig15557:6440..69891691679207.9141326-CDS-H-elongata_contig15557:6440..6989Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 6441..6989 -
1622929918.281027-CDS-H-elongata_contig15557:7306..74381622929918.281027-CDS-H-elongata_contig15557:7306..7438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 7307..7438 -
1691679207.9277189-CDS-H-elongata_contig15557:7306..74381691679207.9277189-CDS-H-elongata_contig15557:7306..7438Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15557 7307..7438 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15557.3643.1prot_H-elongata_contig15557.3643.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15557 242..7438 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15557.3643.1

>prot_H-elongata_contig15557.3643.1 ID=prot_H-elongata_contig15557.3643.1|Name=mRNA_H-elongata_contig15557.3643.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=646bp
ITPLQVSCIYGLGLPSKYLEASIRIVVGQRWDGGWRTLAQHLDQKLFYSP
QVNEEEFRSNARGSFRSAPDDVGGGVVEVGPAADEAIVRIGIDSAGLVER
IQVMSTVQAGDKDEFIKGVRVEGAPLGLPAMLGGTALGSMGLGGLWQDGK
TPIAWQGAGDVEAHVIYPAKHHVMGSGERGQILAAISAEMEERCFQLGRE
GRVLEAERLRQRTENDLLLVGAVGTCKGIENYSRHLAGRGPGEPPETLID
YFPQDNWLLIVDESHVSAPQLGAMFGGDRARKAKLVEHGFRLPSALDNRP
LKAEEFWSKANKSIFVSATPGKFELELSNPGNLQMISDGIDRTTSDLVDA
QAVIRPTGITDPPVDIRPSKGQVSDLVQECKARGQREERVLVTALTKRMA
EDLCAFLIEQGVPTAYLHSGVKPMHRLELLRQLRKGEVDVIVGVNLLREG
LNLPEVSLVCVLDADAEGFLRSDTALLQTIGRATRHEAGRAVLYADRMTP
SMQRALAETDRRRDIQMKHNKLHGVTPSVARAASVGDSLLDSTLRDDTNT
INATRSGRGQDRGRSRYGGNNVIASARTGTVGDDGITTGDKQLTSLAATR
DTCHALDRLAEQAAAKMAKAARKTDFKEAALWRDRRDALLASMQDL
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mRNA from alignment at H-elongata_contig15557:242..7438-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15557.3643.1 ID=mRNA_H-elongata_contig15557.3643.1|Name=mRNA_H-elongata_contig15557.3643.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7197bp|location=Sequence derived from alignment at H-elongata_contig15557:242..7438- (Himanthalia elongata Himel1 dioecious)
ATCACTCCGTTGCAGGTGAGCTGCATCTACGGCCTTGGTTTGCCGAGTAA ATACCTGGAGGCCAGCATTCGGATCGTCGTGGGGCAGAGGTGGGACGGGG GCTGGAGAACCCTTGCGCAGCATCTTGACCAGGTAAGAATAACGTACATT CGGCACGGGCACGCTCGAGCACGCCCTAACCCCTGACTAATTTACTGTTT ACGGTATTGATTGCCGTTCTCGTTCCTGTTCTCATTCTCATACATTAGTC TCTCGATTACCCTGGTTTCTGTCCAGTGGCTCCAATCTTGGGCCCTGTTG TCATGTCACATGTCACGTGGGTAGGCATCAGCGATCGAAATTCCGCATAA AACGTAGGTAATGAATAACGCTTCTTCATAAAAGCGCCCCTTCTTGGTAC GGATTACAAACTATGTCAAGTACCGGTATTGTTTTTCTACCGGACGCAGA AGCTGTTCTACTCGCCGCAAGTGAACGAAGAAGAGTTTCGGAGTAACGCT CGTGGGAGCTTTCGAAGCGCTCCGGATGACGTTGGAGGGGGCGTCGTCGA GGTTGGCCCGGCCGCAGACGAAGCGATTGTTCGCATTGGGATCGATTCGG CGGGTCTTGTTGAGAGGATACAGGTTATGTCTACTGTCCAAGCTGGCGAT AAAGACGAGTTCATCAAGGGGGTTAGGGTTGAGGGCGCGCCACTTGGTTT GCCAGCGATGTTAGGTGGTACAGCTCTCGGAAGTATGGGTTTGGGCGGTT TGTGGCAAGATGGAAAGACGCCCATCGCGTGGCAAGGAGCTGGTGATGTA GAAGCACACGTGATTTACCCCGCCAAGCATCACGTAATGGGAAGCGGAGA AAGGGGTCAGATTCTAGCGGCAATATCTGCTGAAATGGAAGAGAGGTGCT TCCAGCTTGGACGAGAGGGCCGCGTGCTGGAGGCCGAACGGCTACGCCAG AGGACCGAGAACGACCTCCTGCTTGTTGGTGCTGTCGGCACATGCAAGGT ATCTATAGTAGTTCTGTGTGCCGCATATAGTCTATTTGTCAGGACATAAT CTAGCTCTAAGGCTCTCCGCCAGTTGTAGCTGTAAGCACATACAGTACCC TGGTATAGAGTAATAGAGTAGTAATATTCCCGATACACCTGGTACAAATA TCCGATGCTTGTGCTGCACTAGTCCTTGAAGTCCTGATTGTAGCCCCAGT TGTGGTCGCAGCATCTTTTCGAGAAGGCGCATTAGGCATTAGCTTTTTGT AATCCACTGTGTTCCTGAAAGCACGTTGAGAGCGCTGGATGCTGATAATA GCAACAACAACAACTACATATCTCAAGTTGATCCGGGCGTTGCTCGGTGT AGAAAGAGTTATACTTGGTTAGCTGTCTGACATGAGTATACTGCGTTTTC ATTCCTTCCTTGCTGAGTGCCGCACACCATCTCTCCGTGCAGTTTTTAGG GATTATATGATTATATACTGTATAGATCACTTAATATTTTCCCTGTGTCA GATGTTTTCTTTAAACCTAGAACAACAGCGGTCTATGTAGCATATTAAAA CAGCACACACTAACATACAGTAGGGTTAGGGATATCGCATCGCCGTTAGG ATATTAGCTACTATTGCTACTACCGGGTGGTTGACCTGACCTGACCTGAC CTGACCTGTGTGGATGTTTGGCGATATTTGGCGCGATTTCGGATGATTTG TGATGGTGTGCATAACGAGGTGACGTCATCACCAAGATATGGCCCGTGAG GGGTGTCTTCGTAGCCACTTGCTACGCGGTATTATACTGTATAATAGAGT TTATAGAAGGTCGATGGATGACTCACTTGTGTCGCCGTACTTGCTATACG GTAGTGATTATATTTACACGGTAGAGATTATGATTATGGTCAGCTGATTA TCAAGTACTTTCTGCCGCTTTCTTTCTTTCCCCGACCACGTGTCGCGTTC GTGCTATTGGCTGCTTGGTGCTGTATGGATCGGTTAGGGTATCGAGAACT ACTCTCGTCATCTCGCGGGACGTGGTCCAGGAGAACCCCCAGAGACGCTC ATCGACTACTTTCCTCAAGACAATTGGCTGCTCATCGTGGATGAGAGCCA TGTCTCTGCGCCGCAGCTTGGAGCGATGTTCGGGGGAGACCGTGCTCGCA AGGCAAAGCTCGTGGAGCACGGATTCCGGCTGCCGTCAGCGCTAGACAAC CGACCTCTGAAGGTAAAATATTTGAATCCAAGTCGTTGTCGAACCGTGTC GTGTCAGATCGTGCCATCCATCCTGGGCCATCGATATCCCTCCTCGACGT CCTCGCCGATAACACTGGTATTGTACTGCTCTACTCTAGTTTCTGCATTT TTGTCTCTCTTTTTGTTTATATGATTGCTTGTATTCTAACACATTATACT AGGCAGAAGAGTTCTGGTCGAAGGCCAACAAGTCCATCTTCGTAAGTGCT ACTCCAGGAAAGTTCGAGCTCGAGCTTTCAAACCCGGGCAACCTGCAGAT GATATCGGATGGCATCGATCGGACGACATCGGTCTCCCAGGCAAGCGATT CCAAGACGGGGTTAGCTTCTGGCATGGATGCAACCGCTTCTTCTGTCGGC GATTTGAAATATGTCCTTGTTTATATATATATTATCAATTTTGCCGATGG GACAATTCAGCGTGCGATTCTATTGATAAGTGATAAGTTATTACTACTGT ATATACTACTACTGTATATATTACTACCAATCCCAGCGATAAATACGGTA GAACTGTTCTCACCTTATGGTCCTAAGGGATCTACCCGCCGTTGCCGTTG CCGTCTCCCCCAATCCACGCGTACGTTGCCGTTGCCGTCTTGCACCAACG AAGGCCTCGAGGAAGACGGCCAGCAGAGGCAGCAGACTCGGGTGGGACGC AATAGAGGATCTCGTGGATGCTCAAGCCGTGATCCGTCCGACGGGAATAA CAGACCCACCGGTGGACATCCGGCCGTCGAAAGGGCAGGTGTCAGATCTT GTGCAGGAGTGCAAGGCAAGGGGACAGAGAGAAGAGAGAGTGCTGGTCAC GGCGCTCACCAAGAGAATGGCTGGTAAGGAGCTGTAGAAACCACTGTAGT AACTCCGCAAGCCTCGACGACGAAGCCTCTGCGAGGGCTACCTATTTTGC CACAGATAAATCAAGTACATTGCTGTAATAAACATGATAATAAGTACGCT ATGGCACTAAATACCGGTATTGTACTGTCCTGTTAATCAAATGCTAAAGT TATACGAAGTAGTTGTTCTTGGGGTAGCGTAATCAGTCCAGTACAGTCCA GTCCAGTCCTCGATAGAAACATACCAGGTATATTCATAAAATATACCAAA TGCTGGCGACTACTGTGTACCTCACCTGACGAGCCACGCAGCATGTTACT TACATTGTAGGTTTAATGCCATGTCAAATGTCAAAACCGCCAGTTGCCGC CGTGAGATCGATCGATCGATACCACTTAATATCACTTAATACCACCTAAT ACCACCTAATACCACTTAATACCACTTAATACCACCCATTGAACTGTTAG TATGCATTACATATTATTAAGGGCCAGTAGCCTCTCTGTTCTCCTCTCCC CTCTGTCGATTTCATATACCATACCATGCCATGCCCTTCCCTGGGAACAC CTCGTTCTCGTTATCTCCTTATGGTTTATCATTTCCCCCGCTCCCCCTAG CCGTTGCTGATGCTGATGATAATGTTGCTGTCAATGCCATCGATGATACC TGGTATTGATGTTGCCGTTGATGGTATTGCTATCAATGATGTTGATGATA TCGTCGTGTTCGTTTTTGCTTTTGTTTCTATTGCTGTCGGTGTAACTAGT CGGTCTCGGTCGTTAGTTATTATAGTTATTATAGTTATTATAGTTAGGGT TAAACTGGCATATGCTGAGTATACTGATTGCTTTGTGTGATGTAATGCGG CATCTCCTGGCGCTTTGTGCGCCCCAGAGGACCTCTGTGCATTCTTGATC GAACAAGGCGTCCCAACTGCATATCTGCACTCGGGAGTGAAACCGATGCA TCGGTTGGAGCTACTACGACAACTGAGGAAAGGCGAAGTGGATGTCATCG TCGGCGTTAACTTGCTCAGAGAGGTGAAGTGATCGAAACCAGCGATTAAT CGACTCTAGCCCGAGAGGTACGGTATTATTCGCTCGATTGATGTCTCGTT ACTACAGTATAGTATAGTATAGTATAGTACTTGGTATAGTACATTATAGA ATAGTACTTGATACAGTACAGTACCGCTACAAGTATATTTTACTTGATAT CGCTAAAACATCAAATTAATGCCTGCCCTCAGTGAAATATATATAATGGA AGTGGTTAATTAACGTTGCTGCCCTCTTAATAGAGGGGGGGGGCTTAGGG GCCGCGAGCAAGGGATATATTCACCCCGATTTTCGCTTGTGTGCTTGTGT TATTGGGAACCGGGCGTTAGTTGTATCCATTTCTATTGATATTGCTATTG ATAGTTTTTGCGCTCTCGCGCTCTGGTGGAAACTTCTAGTAAGTATTTAA GACCTTAATCCTAACCCAAACCCAATTGCGCGGCTAGCTCGTCGTCAGCA CCCTCTATCCTTCATGCCTTTATCTTTCTTTCATCATCTCCTTATCGTGT TTGGCCTACACTATTCAGTAATCACTATTCATTCTTCACCCTCTATACTT TCTCCGGAGATATGATAGGGCCTCAATCTGCCGGAAGTTTCTCTAGTGTG CGTTCTTGACGCAGACGCCGAGGGTTTCCTTCGCTCGGATACGGCCTTGC TGCAGACCATCGGCAGAGCCACGAGGCATGAGGCTGGGAGAGCGGTCTTG TATGCCGATCGCATGACGCCATCGATGCAGCGAGCATTGGCCGAAACTGA CCGTCGCAGAGACATCCAAATGAAGTGAGTTAAGCCTGTAGATTCAAGGC AGAGATGCTCAATGTCAGAGCTGCGAGAGTCGAGGGAGACGTATTTTGGT CGGATGCAGAGAGGGACTTTTTTTTAACCCGAATATGTGCTGCAGTAATA GGTTAATACTCTAATATACTAGCTAATACACTAGACTAGCCTGCAGTAAT ACACTAGACTAGCCTGCAGTAATACACTAGACTAGCCTGCAGTATATCCT ATTACACAACACAAATTACACTGGCGGTGATGTGCGTAATAAGCATGTAA CTGTTCCAGGCCGCGATGTGCAAGACTGGTCGCTTTCCTCATAAAACACA TTTTTCACACGACGACAGTCAGTCGACATTACTCCAGGAGTGCGGCACGA ATAGCATTACCTATACTTCTCCTTGTACTGTACATGAAGATTCGAAGATT CCATTCTATGGTGATCACATATAGCAGAGTAAGATCAACCGGATTTGGTT GCCTCCTGCTTGTGGTCAGCTGAACAGATCTCCCCAGAAGGGGGGAGTAT TCGCAAACCATCGTGGCGCCTCTTCACGTGTCATGCCGGCTTGCGCGATG TCATGCAAATTGATAAAAAGGAAAAATGAGTTTTCCCCTGTCCCCGTTCG TGTCTGATAATTTGGTCTCGCAAGACGGGTTCGGCAGTCCTGTCCCGCAT CCGTCCGCTCATTCTCTCAACCCATCATACTGCATTCTGAATCTGGTATA TTAGTACTCCCGCGATCCTCTCGGTTTCCGCGACGGCGTCCATCTCTACC GTCAACCGCCATCTGGCCAATCCCGATTTCATCAGGTCACGCAATTGCGT ACGGATGGCGTTGACTACCGAGAGTCCACCGGTACTGAGCCAGCAGTCCT CAAAGTAGTTGAGTAACGGGTGCAGCCTATTGAGGTAACCCCATGGACCA CTTATTGTACGCCTCTCTTTTCTCACACCCACTATTGGTTGAGTAGGCAT GTGCAATACAGTCACAGACACTATCTGTCAAATGACGGATCCCCGTCGTA TCTACGGTATAAATACAGTACGGCAAAAGAATACTACAAAAGAGTACCGA TACTAAAGACACCAGATAGGAAGTTGGCTCGAAATGGTTCTTACTAAATA CGACTACTTATATAGTATTTGGCGGACAGAGCTAGGCAGTACATCTAGAG TCTTAGGGCGATCAGGCGGCCTCTGATTTCGTTGCAACTATGCCCCAACC AAAGCATGCATTGAATGTAGTAGCTCATATATACTACTAATAGTACTAGT ATTATGTTATCTATTTCTGTGCCAGATACCGTATCCCCCCCCCCCTCTCT CTAATGCGCCTTATCGTTTCGTGTCGTACATTGTCGGCGAAGGCACAACA AGCTTCATGGTGTTACGCCAAGCGTAGCCCGGGCGGCATCCGTAGGGGAC AGCCTTCTTGATAGTACTTTGCGAGACGACACCAACACCATCAACGGTAT CAGTGGTAGCAGAAAAACCCCATTAGGGTTAGAGCTACTAGTTCGGCCAA GACAAGGCGCGCGAGAGGATGTCGACCATAACACTGCTCCTACTGTCGTA TCCTGTGCGGAGGATCGTTCTTCGGAGAATAGTTCTTCCCTGCTGCCAGA TCAGGTCACAAGTCAAAGTAATCTATACCCGAGGCCCCCATCAACTTCAA TTGTCATGAATGTTTTTTGCCGTGCCTGCTGGCGTGTGTGTTTAGAATCA TTTTTGAGTCTTGTCGACAGCCTTGTCCTTGTCCTTGTCGATCCTCAAGC AAGTAGTCCGGCGGAGGATTGTTCTTTATAAAAGAAAAAGTTGTCCGAGT GTACGATACATGTCCGCGAGTTGATTGCCTCTTTGAAAGTGCAGCCTAGC GATAAGAGATGATTGTGATGATTGCGATGAGAGATTAAAAGCGTTCGCTC CCCGTCGTGTGTCGGGCATTTATTTTATATTGATGTACCGGTAGGTTCAG CTGCTGTACGATGTAGCGACTCGGAGCGGTCGGGGCCAAGATCGAGGGCG ATCACGTTATGGCGGCAACAACGTTATCGCCTCTGCCCGTACTGGTACTG TCGGTGATGACGGTATCACAACCGGGGACAAGCAGCTCACTTCTCTGGCG GCCACGCGGGACACCTGCCATGCTTTAGATCGTCTAGCAGAACAGGCCGC TGCAAAGATGGCCAAGGCGGCGAGGAAAACGGATTTCAAGGAGGCCGCTT TGTGGAGAGATCGCAGGGACGCGCTGCTGGCTAGCATGCAGGACCTC
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Coding sequence (CDS) from alignment at H-elongata_contig15557:242..7438-

>mRNA_H-elongata_contig15557.3643.1 ID=mRNA_H-elongata_contig15557.3643.1|Name=mRNA_H-elongata_contig15557.3643.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3876bp|location=Sequence derived from alignment at H-elongata_contig15557:242..7438- (Himanthalia elongata Himel1 dioecious)
ATCACTCCGTTGCAGGTGAGCTGCATCTACGGCCTTGGTTTGCCGAGTAA
ATACCTGGAGGCCAGCATTCGGATCGTCGTGGGGCAGAGGTGGGACGGGG
GCTGGAGAACCCTTGCGCAGCATCTTGACCAGATCACTCCGTTGCAGGTG
AGCTGCATCTACGGCCTTGGTTTGCCGAGTAAATACCTGGAGGCCAGCAT
TCGGATCGTCGTGGGGCAGAGGTGGGACGGGGGCTGGAGAACCCTTGCGC
AGCATCTTGACCAGAAGCTGTTCTACTCGCCGCAAGTGAACGAAGAAGAG
TTTCGGAGTAACGCTCGTGGGAGCTTTCGAAGCGCTCCGGATGACGTTGG
AGGGGGCGTCGTCGAGGTTGGCCCGGCCGCAGACGAAGCGATTGTTCGCA
TTGGGATCGATTCGGCGGGTCTTGTTGAGAGGATACAGGTTATGTCTACT
GTCCAAGCTGGCGATAAAGACGAGTTCATCAAGGGGGTTAGGGTTGAGGG
CGCGCCACTTGGTTTGCCAGCGATGTTAGGTGGTACAGCTCTCGGAAGTA
TGGGTTTGGGCGGTTTGTGGCAAGATGGAAAGACGCCCATCGCGTGGCAA
GGAGCTGGTGATGTAGAAGCACACGTGATTTACCCCGCCAAGCATCACGT
AATGGGAAGCGGAGAAAGGGGTCAGATTCTAGCGGCAATATCTGCTGAAA
TGGAAGAGAGGTGCTTCCAGCTTGGACGAGAGGGCCGCGTGCTGGAGGCC
GAACGGCTACGCCAGAGGACCGAGAACGACCTCCTGCTTGTTGGTGCTGT
CGGCACATGCAAGAAGCTGTTCTACTCGCCGCAAGTGAACGAAGAAGAGT
TTCGGAGTAACGCTCGTGGGAGCTTTCGAAGCGCTCCGGATGACGTTGGA
GGGGGCGTCGTCGAGGTTGGCCCGGCCGCAGACGAAGCGATTGTTCGCAT
TGGGATCGATTCGGCGGGTCTTGTTGAGAGGATACAGGTTATGTCTACTG
TCCAAGCTGGCGATAAAGACGAGTTCATCAAGGGGGTTAGGGTTGAGGGC
GCGCCACTTGGTTTGCCAGCGATGTTAGGTGGTACAGCTCTCGGAAGTAT
GGGTTTGGGCGGTTTGTGGCAAGATGGAAAGACGCCCATCGCGTGGCAAG
GAGCTGGTGATGTAGAAGCACACGTGATTTACCCCGCCAAGCATCACGTA
ATGGGAAGCGGAGAAAGGGGTCAGATTCTAGCGGCAATATCTGCTGAAAT
GGAAGAGAGGTGCTTCCAGCTTGGACGAGAGGGCCGCGTGCTGGAGGCCG
AACGGCTACGCCAGAGGACCGAGAACGACCTCCTGCTTGTTGGTGCTGTC
GGCACATGCAAGGGTATCGAGAACTACTCTCGTCATCTCGCGGGACGTGG
TCCAGGAGAACCCCCAGAGACGCTCATCGACTACTTTCCTCAAGACAATT
GGCTGCTCATCGTGGATGAGAGCCATGTCTCTGCGCCGCAGCTTGGAGCG
ATGTTCGGGGGAGACCGTGCTCGCAAGGCAAAGCTCGTGGAGCACGGATT
CCGGCTGCCGTCAGCGCTAGACAACCGACCTCTGAAGGGTATCGAGAACT
ACTCTCGTCATCTCGCGGGACGTGGTCCAGGAGAACCCCCAGAGACGCTC
ATCGACTACTTTCCTCAAGACAATTGGCTGCTCATCGTGGATGAGAGCCA
TGTCTCTGCGCCGCAGCTTGGAGCGATGTTCGGGGGAGACCGTGCTCGCA
AGGCAAAGCTCGTGGAGCACGGATTCCGGCTGCCGTCAGCGCTAGACAAC
CGACCTCTGAAGGCAGAAGAGTTCTGGTCGAAGGCCAACAAGTCCATCTT
CGTAAGTGCTACTCCAGGAAAGTTCGAGCTCGAGCTTTCAAACCCGGGCA
ACCTGCAGATGATATCGGATGGCATCGATCGGACGACATCGGCAGAAGAG
TTCTGGTCGAAGGCCAACAAGTCCATCTTCGTAAGTGCTACTCCAGGAAA
GTTCGAGCTCGAGCTTTCAAACCCGGGCAACCTGCAGATGATATCGGATG
GCATCGATCGGACGACATCGGATCTCGTGGATGCTCAAGCCGTGATCCGT
CCGACGGGAATAACAGACCCACCGGTGGACATCCGGCCGTCGAAAGGGCA
GGTGTCAGATCTTGTGCAGGAGTGCAAGGCAAGGGGACAGAGAGAAGAGA
GAGTGCTGGTCACGGCGCTCACCAAGAGAATGGCTGGATCTCGTGGATGC
TCAAGCCGTGATCCGTCCGACGGGAATAACAGACCCACCGGTGGACATCC
GGCCGTCGAAAGGGCAGGTGTCAGATCTTGTGCAGGAGTGCAAGGCAAGG
GGACAGAGAGAAGAGAGAGTGCTGGTCACGGCGCTCACCAAGAGAATGGC
TGAGGACCTCTGTGCATTCTTGATCGAACAAGGCGTCCCAACTGCATATC
TGCACTCGGGAGTGAAACCGATGCATCGGTTGGAGCTACTACGACAACTG
AGGAAAGGCGAAGTGGATGTCATCGTCGGCGTTAACTTGCTCAGAGAGAG
GACCTCTGTGCATTCTTGATCGAACAAGGCGTCCCAACTGCATATCTGCA
CTCGGGAGTGAAACCGATGCATCGGTTGGAGCTACTACGACAACTGAGGA
AAGGCGAAGTGGATGTCATCGTCGGCGTTAACTTGCTCAGAGAGGGCCTC
AATCTGCCGGAAGTTTCTCTAGTGTGCGTTCTTGACGCAGACGCCGAGGG
TTTCCTTCGCTCGGATACGGCCTTGCTGCAGACCATCGGCAGAGCCACGA
GGCATGAGGCTGGGAGAGCGGTCTTGTATGCCGATCGCATGACGCCATCG
ATGCAGCGAGCATTGGCCGAAACTGACCGTCGCAGAGACATCCAAATGAA
GGCCTCAATCTGCCGGAAGTTTCTCTAGTGTGCGTTCTTGACGCAGACGC
CGAGGGTTTCCTTCGCTCGGATACGGCCTTGCTGCAGACCATCGGCAGAG
CCACGAGGCATGAGGCTGGGAGAGCGGTCTTGTATGCCGATCGCATGACG
CCATCGATGCAGCGAGCATTGGCCGAAACTGACCGTCGCAGAGACATCCA
AATGAAGCACAACAAGCTTCATGGTGTTACGCCAAGCGTAGCCCGGGCGG
CATCCGTAGGGGACAGCCTTCTTGATAGTACTTTGCGAGACGACACCAAC
ACCATCAACGGCACAACAAGCTTCATGGTGTTACGCCAAGCGTAGCCCGG
GCGGCATCCGTAGGGGACAGCCTTCTTGATAGTACTTTGCGAGACGACAC
CAACACCATCAACGCGACTCGGAGCGGTCGGGGCCAAGATCGAGGGCGAT
CACGTTATGGCGGCAACAACGTTATCGCCTCTGCCCGTACTGGTACTGTC
GGTGATGACGGTATCACAACCGGGGACAAGCAGCTCACTTCTCTGGCGGC
CACGCGGGACACCTGCCATGCTTTAGATCGTCTAGCAGAACAGGCCGCTG
CAAAGATGGCCAAGGCGGCGAGGAAAACGGATTTCAAGGAGGCCGCTTTG
TGGAGAGATCGCAGGGACGCGCTGCTGGCTAGCATGCAGGACCTCCGACT
CGGAGCGGTCGGGGCCAAGATCGAGGGCGATCACGTTATGGCGGCAACAA
CGTTATCGCCTCTGCCCGTACTGGTACTGTCGGTGATGACGGTATCACAA
CCGGGGACAAGCAGCTCACTTCTCTGGCGGCCACGCGGGACACCTGCCAT
GCTTTAGATCGTCTAGCAGAACAGGCCGCTGCAAAGATGGCCAAGGCGGC
GAGGAAAACGGATTTCAAGGAGGCCGCTTTGTGGAGAGATCGCAGGGACG
CGCTGCTGGCTAGCATGCAGGACCTC
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