mRNA_H-elongata_contig15523.3614.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: UPI001C9A9669 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A9669) HSP 1 Score: 86.7 bits (213), Expect = 2.290e-18 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 7 NSLKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFL 192
N +WW A +KYP + VA YLT+PATS SER FS AGNIVTKKR+RL PENVN LVFL
Sbjct: 414 NPFEWWKARTNKYPAISEVAKKYLTIPATSAMSERCFSCAGNIVTKKRNRLLPENVNTLVFL 475
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: UPI000B937505 (zinc finger BED domain-containing protein 1-like n=2 Tax=Aphidinae TaxID=133076 RepID=UPI000B937505) HSP 1 Score: 81.6 bits (200), Expect = 3.600e-18 Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 TTNSLKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
T + +WW KYP + +A YLT+PATS SSER FS AGNIVT+KR LSPENVN LVFLH
Sbjct: 56 TLDPKEWWKTRFSKYPVIGDLAKKYLTIPATSVSSERCFSTAGNIVTRKRASLSPENVNMLVFLH 120
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 78.6 bits (192), Expect = 1.600e-17 Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 TTNSLKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
+TN L+WW ++ ++P+L S+A YL VPATS SER+FS+AGNIV+KKR LSPE+++ L F H
Sbjct: 30 STNPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTFFH 94
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: A0A2S2P4C5_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P4C5_SCHGA) HSP 1 Score: 78.2 bits (191), Expect = 2.660e-17 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 16 KWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
+WW +H KYP + VA +L++PATS SSER FS AGN+VT KR+ L+PENVN LVFL+
Sbjct: 39 EWWKSHEKKYPLVAKVAKKFLSIPATSVSSERCFSTAGNVVTPKRNCLAPENVNMLVFLY 98
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA) HSP 1 Score: 77.0 bits (188), Expect = 3.100e-17 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 13 LKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
LKWW AH + YP + ++ VYL + A+S SSERVFS AGNIVT KR+ LS ENVN L+FL+
Sbjct: 3 LKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFLN 63
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: UPI001113C14C (zinc finger BED domain-containing protein 1-like n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=UPI001113C14C) HSP 1 Score: 77.8 bits (190), Expect = 5.280e-17 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 16 KWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
+WW +H KYP + + YL++PATS SSER FS AGN+VT KR+ L+PENVN LVFL+
Sbjct: 56 EWWKSHEKKYPLIAELVKKYLSIPATSVSSERCFSTAGNVVTSKRNCLAPENVNMLVFLY 115
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: UPI0005F55F89 (zinc finger BED domain-containing protein 1-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F55F89) HSP 1 Score: 80.1 bits (196), Expect = 1.490e-16 Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 13 LKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
L+WW DK+P L +A YL++PATS S+ER FS AGNIVT KR+ LSPENVN LVFL+
Sbjct: 209 LEWWKTRADKFPALAILARKYLSIPATSASAERTFSTAGNIVTPKRNCLSPENVNMLVFLY 269
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: UPI000DC12F9E (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC12F9E) HSP 1 Score: 76.3 bits (186), Expect = 2.360e-16 Identity = 35/63 (55.56%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 7 NSLKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
++L+WW H KYP + ++A YL +PATS SSER FS AGNIV+ KR L+PE VN L+FL+
Sbjct: 54 DALEWWKTHTSKYPLIVALAMKYLGIPATSVSSERCFSTAGNIVSAKRSCLAPETVNMLIFLY 116
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: A0A8B8G026_9HEMI (zinc finger BED domain-containing protein 1-like n=2 Tax=Aphididae TaxID=27482 RepID=A0A8B8G026_9HEMI) HSP 1 Score: 79.3 bits (194), Expect = 3.050e-16 Identity = 39/65 (60.00%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 TTNSLKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
T + +WW KYP + +A YLT+PA S SSER FS AGNIVT+KR LSPENVN LVFLH
Sbjct: 207 TLDPKEWWKTRFSKYPVIGDLAKKYLTIPAISVSSERCFSTAGNIVTRKRASLSPENVNMLVFLH 271
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Match: UPI0018935EA0 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI0018935EA0) HSP 1 Score: 80.5 bits (197), Expect = 3.570e-16 Identity = 36/64 (56.25%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 4 TNSLKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRDRLSPENVNNLVFLH 195
+++LKWW H K+P L +A Y+ +PA+S SSERVFS+AGNI+T KR L PENV++LVFL+
Sbjct: 426 SDALKWWKDHESKFPRLAELAKKYMCIPASSASSERVFSSAGNIITAKRSSLLPENVSSLVFLY 489 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15523.3614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15523.3614.1 >prot_H-elongata_contig15523.3614.1 ID=prot_H-elongata_contig15523.3614.1|Name=mRNA_H-elongata_contig15523.3614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp TTNSLKWWLAHRDKYPTLQSVACVYLTVPATSGSSERVFSAAGNIVTKKRback to top mRNA from alignment at H-elongata_contig15523:851..1045- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15523.3614.1 ID=mRNA_H-elongata_contig15523.3614.1|Name=mRNA_H-elongata_contig15523.3614.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=195bp|location=Sequence derived from alignment at H-elongata_contig15523:851..1045- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15523:851..1045- >mRNA_H-elongata_contig15523.3614.1 ID=mRNA_H-elongata_contig15523.3614.1|Name=mRNA_H-elongata_contig15523.3614.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig15523:851..1045- (Himanthalia elongata Himel1 dioecious)back to top |