prot_H-elongata_contig153937.3558.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig153937.3558.1
Unique Nameprot_H-elongata_contig153937.3558.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
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BLAST of mRNA_H-elongata_contig153937.3558.1 vs. uniprot
Match: D7FQA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQA2_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 4.960e-17
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 0 
Query:    1 TFKRKITRLRHLYVFNLARKIMRRMFAEAGLGPGNDPTPPPGPF--DEIEIEAASP-GMPKSMQVQAAILQRRQVLLHEIERTTREENELEKAIE 92
            T  +K+  LR   VFNLA K+MRR F +AGLGPGNDP PP GP   D+ ++E A   G+P  MQV AA L+++  +  EIE+T R E EL+ AIE
Sbjct:  503 TLTQKVKTLRRTLVFNLACKVMRRRFKDAGLGPGNDPNPPKGPIVVDDSQLEGAGDRGLPPDMQVHAARLEQKNAVQREIEQTERREQELQHAIE 597
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153937.3558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQA2_ECTSI4.960e-1751.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig153937contigH-elongata_contig153937:551..1153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig153937.3558.1mRNA_H-elongata_contig153937.3558.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig153937 551..1153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig153937.3558.1 ID=prot_H-elongata_contig153937.3558.1|Name=mRNA_H-elongata_contig153937.3558.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
TFKRKITRLRHLYVFNLARKIMRRMFAEAGLGPGNDPTPPPGPFDEIEIE
AASPGMPKSMQVQAAILQRRQVLLHEIERTTREENELEKAIE
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