mRNA_H-elongata_contig15292.3497.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: D8LIP1_ECTSI (Phosphoribosylformylglycinamidine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP1_ECTSI) HSP 1 Score: 219 bits (559), Expect = 5.610e-64 Identity = 103/120 (85.83%), Postives = 111/120 (92.50%), Query Frame = 1
Query: 7 KTLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
KTLF+LVK+TL KG +NSIIAFHDNSS+IRGP C VALPS PGKP A++ ERTLHPILTAE+HNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAG+SSYCVGNLRIPGYPLPWEE
Sbjct: 344 KTLFKLVKETLPKGAANNSIIAFHDNSSAIRGPLCPVALPSTPGKPSAIKSGERTLHPILTAETHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGISSYCVGNLRIPGYPLPWEE 463
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A7S2R0R5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0R5_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.190e-55 Identity = 88/120 (73.33%), Postives = 103/120 (85.83%), Query Frame = 1
Query: 7 KTLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
KTLF++VK+TL KG +NSIIAFHDNSSSIRG C LP++ GK A++ ++TLHPILTAE+HNFP GVAPFPGAETGTGGRLRDVMATGRGA P+AG+S+YCVGNL IPGY LPWE+
Sbjct: 102 KTLFQMVKETLPKGIPNNSIIAFHDNSSSIRGYECDALLPTEFGKAGAMKVDKQTLHPILTAETHNFPCGVAPFPGAETGTGGRLRDVMATGRGAYPVAGISAYCVGNLHIPGYELPWED 221
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A7S4K8A4_9STRA (Phosphoribosylformylglycinamidine synthase (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K8A4_9STRA) HSP 1 Score: 193 bits (491), Expect = 8.290e-55 Identity = 90/119 (75.63%), Postives = 103/119 (86.55%), Query Frame = 1
Query: 10 TLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
TLFR+VKDTL KG +NS+IAFHDNSS+IRG C +P++ GK ++ +RTLHPILTAE+HNFPSGVAPFPGAETGTGGRLRDVMATGRGA P+AGVSSYCVGNLRIPGY LPWE+
Sbjct: 308 TLFRMVKDTLPKGVPNNSVIAFHDNSSAIRGYECDALVPTEFGKAGPMKVEKRTLHPILTAETHNFPSGVAPFPGAETGTGGRLRDVMATGRGAYPVAGVSSYCVGNLRIPGYELPWED 426
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A7S1ZK75_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZK75_TRICV) HSP 1 Score: 180 bits (456), Expect = 9.430e-53 Identity = 85/119 (71.43%), Postives = 100/119 (84.03%), Query Frame = 1
Query: 10 TLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
TLF++VK TL KG +NS+IAFHDNSS+IRG + +P++ GK + +RTLHPILTAE+HNFPSGVAPFPGAETGTGGRLRDVMATGRGA P+AGVSSYCVGNL +PGY LPWE+
Sbjct: 271 TLFQMVKATLPKGVPNNSVIAFHDNSSAIRGYEVEALVPTEFGKAGPMIKDKRTLHPILTAETHNFPSGVAPFPGAETGTGGRLRDVMATGRGAYPVAGVSSYCVGNLNVPGYDLPWED 389
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A7S2JTG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTG3_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.830e-51 Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 1
Query: 10 TLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
TLF++VKDTL K +NS+IAFHDNSSSIRG C P+ GK + +TLHPILTAE+HNFP GVAPFPGAETGTGGRLRDV ATG+GA P+AG+SSYCVGNL IPGY +PWE+
Sbjct: 8 TLFQMVKDTLPKDKPNNSVIAFHDNSSSIRGYECTSLKPTTFGKAGPMALESQTLHPILTAETHNFPCGVAPFPGAETGTGGRLRDVTATGQGAYPVAGISSYCVGNLNIPGYDMPWED 126
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A1E7FEH8_9STRA (Phosphoribosylformylglycinamidine synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEH8_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.490e-49 Identity = 84/119 (70.59%), Postives = 99/119 (83.19%), Query Frame = 1
Query: 10 TLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
TLF++VK TL K +NSIIAFHDNSSSIRG C +PS + +++ ++TLHPILTAE+HNFPSGVAPF GAETGTGGRLRDVMATGRGA P+AG+SSYCVGNL+IPGY LPWE+
Sbjct: 155 TLFKMVKATLPKDVPNNSIIAFHDNSSSIRGYECDALVPSSTTQAGSMKVGKQTLHPILTAETHNFPSGVAPFSGAETGTGGRLRDVMATGRGAYPVAGISSYCVGNLQIPGYELPWED 273
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A7S0KAP8_9STRA (Phosphoribosylformylglycinamidine synthase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAP8_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.500e-49 Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 1
Query: 10 TLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
TLF++VK TL K +NS+IAFHDNSSSIRG C P+ GKP +V +++TLHPILTAE+HNFPSGVAPFPGAETGTGGRLRDV ATGRGA P+AGVSSYCVGNL IPGY LPWE+
Sbjct: 254 TLFQMVKATLPKDQPNNSVIAFHDNSSSIRGYECTGMKPTV-GKPGSVTLQKQTLHPILTAETHNFPSGVAPFPGAETGTGGRLRDVTATGRGAYPVAGVSSYCVGNLNIPGYNLPWED 371
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A7S4RP44_9STRA (Phosphoribosylformylglycinamidine synthase (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RP44_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.020e-49 Identity = 86/119 (72.27%), Postives = 95/119 (79.83%), Query Frame = 1
Query: 10 TLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
TLF++VK TL K +NSIIAFHDNSS+IRG C P+ K V ++TLHPILTAE+HNFP GVAPFPGAETGTGGRLRDVMATGRGA P+AGVSSYCVGNLRIPGY LPWE
Sbjct: 251 TLFQMVKATLPKDKPNNSIIAFHDNSSAIRGYECMALRPTQFSKAGPVEVGKQTLHPILTAETHNFPCGVAPFPGAETGTGGRLRDVMATGRGAYPVAGVSSYCVGNLRIPGYDLPWES 369
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: A0A7S3Q0D6_9STRA (Phosphoribosylformylglycinamidine synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0D6_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.040e-49 Identity = 84/120 (70.00%), Postives = 98/120 (81.67%), Query Frame = 1
Query: 7 KTLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
KTLF++VK+TL + K NSIIAFHDNSSSIRG +C P+ GK + E+TLHPILTAE+HNFP GVAPF GAETGTGGRLRDVMATGRGA P+AG+S+YCVGNL+IP Y LPWE+
Sbjct: 253 KTLFKMVKETLTEESKQNSIIAFHDNSSSIRGYKCNALKPTIVGKASPMVVEEQTLHPILTAETHNFPCGVAPFAGAETGTGGRLRDVMATGRGAYPVAGISAYCVGNLQIPEYELPWED 372
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Match: B7FQE5_PHATC (Phosphoribosylformylglycinamidine synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQE5_PHATC) HSP 1 Score: 176 bits (447), Expect = 7.060e-49 Identity = 85/119 (71.43%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 10 TLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAVRCRERTLHPILTAESHNFPSGVAPFPGAETGTGGRLRDVMATGRGAKPIAGVSSYCVGNLRIPGYPLPWEE 366
TLF++VKDTL K +NSIIAFHDNSSSIRG C P V +TLHPILTAE+HNFPSGVAPFPGAETGTGGRLRDV ATGRGA P+AG+SSYCVGNL+IPGY LPWE+
Sbjct: 253 TLFQMVKDTLPKDIPNNSIIAFHDNSSSIRGYECSALRPVSLDSAGPVHVGNQTLHPILTAETHNFPSGVAPFPGAETGTGGRLRDVTATGRGAYPVAGISSYCVGNLQIPGYDLPWED 371 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15292.3497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15292.3497.1 >prot_H-elongata_contig15292.3497.1 ID=prot_H-elongata_contig15292.3497.1|Name=mRNA_H-elongata_contig15292.3497.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp MDKTLFRLVKDTLRKGPKSNSIIAFHDNSSSIRGPRCQVALPSDPGKPCAback to top mRNA from alignment at H-elongata_contig15292:2158..6580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15292.3497.1 ID=mRNA_H-elongata_contig15292.3497.1|Name=mRNA_H-elongata_contig15292.3497.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4423bp|location=Sequence derived from alignment at H-elongata_contig15292:2158..6580- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15292:2158..6580- >mRNA_H-elongata_contig15292.3497.1 ID=mRNA_H-elongata_contig15292.3497.1|Name=mRNA_H-elongata_contig15292.3497.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at H-elongata_contig15292:2158..6580- (Himanthalia elongata Himel1 dioecious)back to top |