prot_H-elongata_contig15277.3487.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 4.070e-13 Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query: 140 PWTSREEVELPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKHR 212
P ++R LP E LTA A+A LK + +C ICL DF + E +RLPC+H+YH+ CI++WL+ S TCP CK R
Sbjct: 399 PASARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFR 471
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 2.090e-12 Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 0
Query: 140 PWTSREEVELPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKHR 212
P ++R LP E LTA ++A LK + +C ICL +F + E +RLPC+H+YHS CI++WL+ S TCP CK R
Sbjct: 532 PASARAIAALPGETLTAGSLAHLKDDGRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFR 604
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: W5NE42_LEPOC (Ring finger protein 181 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NE42_LEPOC) HSP 1 Score: 67.8 bits (164), Expect = 9.730e-11 Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 0
Query: 149 LPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
LP +++ + +CP+CL +F +E + ++PC H++HSGCI WL ++N+CPVC+H
Sbjct: 63 LPTVIISPEQAGSAADRGLKCPVCLLEFEEEETVRKMPCQHLFHSGCIMPWLGKTNSCPVCRH 125
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: UPI001C4B92BF (E3 ubiquitin-protein ligase RNF181 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4B92BF) HSP 1 Score: 67.4 bits (163), Expect = 1.530e-10 Identity = 21/46 (45.65%), Postives = 37/46 (80.43%), Query Frame = 0
Query: 166 TPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
+P+CP+CL +F +E + ++PC H++HSGC+ WL ++N+CP+C+H
Sbjct: 86 SPKCPVCLLEFEEEETVRKMPCQHLFHSGCLLPWLGKTNSCPLCRH 131
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A8J7NZ34_ATRSP (RN181 ligase (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NZ34_ATRSP) HSP 1 Score: 66.6 bits (161), Expect = 2.960e-10 Identity = 22/44 (50.00%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 168 ECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
+CP+CL +F +E + ++PC H++HSGCI WL ++N+CPVC+H
Sbjct: 78 KCPVCLLEFEEEETVRKMPCQHLFHSGCIMPWLGKTNSCPVCRH 121
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A835ICZ8_9MAGN (RING-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835ICZ8_9MAGN) HSP 1 Score: 68.2 bits (165), Expect = 3.410e-10 Identity = 25/51 (49.02%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 163 KRNTPE--CPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
K N+ E CP+CL +FC ++ +PC HV+H+GCIK+WL+ ++TCP+C+H
Sbjct: 197 KENSEEGSCPVCLDEFCEGIEVTLMPCKHVFHNGCIKEWLQTNHTCPLCRH 247
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A834GIP1_RHOSS (RING-type domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GIP1_RHOSS) HSP 1 Score: 66.6 bits (161), Expect = 6.540e-10 Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 0
Query: 169 CPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKHR 212
C +C DFC I+R+PC HVYHSGCI WL+ SN CP+C+++
Sbjct: 165 CAVCFEDFCHGSEIARMPCSHVYHSGCIVQWLKTSNLCPLCRYQ 208
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A8K0GY05_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GY05_9ROSA) HSP 1 Score: 68.2 bits (165), Expect = 9.410e-10 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
Query: 147 VELPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLP-CMHVYHSGCIKDWLRQSNTCPVCKHRAS 214
+E Q+V+ ++ RN CPICLA++CSKE + +P C H +H+ CI +WLR + TCPVC++ S
Sbjct: 615 IESYQKVVLGESRRLPGRNDTACPICLAEYCSKETLRCIPECKHCFHADCIDEWLRLNGTCPVCRNTPS 683
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: UPI000441AF65 (E3 ubiquitin-protein ligase RNF181 n=1 Tax=Python bivittatus TaxID=176946 RepID=UPI000441AF65) HSP 1 Score: 62.8 bits (151), Expect = 1.400e-9 Identity = 20/44 (45.45%), Postives = 35/44 (79.55%), Query Frame = 0
Query: 168 ECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
+CP+CL +F +E + ++PC H++H+GCI WL ++N+CP+C+H
Sbjct: 10 KCPVCLLEFEEQEGVRKMPCQHLFHTGCILPWLGKTNSCPLCRH 53
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A444UV54_ACIRT (E3 ubiquitin-protein ligase RNF181 n=3 Tax=Acipenseroidei TaxID=186622 RepID=A0A444UV54_ACIRT) HSP 1 Score: 64.7 bits (156), Expect = 1.560e-9 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
Query: 149 LPQEVLT-ADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
LP V+T A A LK CP+CL +F +E + ++PC H++HSGCI WL ++N+CP+C+H
Sbjct: 63 LPTAVITPAQADKGLK-----CPVCLLEFEEEETVRKMPCEHLFHSGCILPWLGKTNSCPLCRH 121 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig15277.3487.1 ID=prot_H-elongata_contig15277.3487.1|Name=mRNA_H-elongata_contig15277.3487.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bpback to top |