prot_H-elongata_contig15277.3487.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15277.3487.1
Unique Nameprot_H-elongata_contig15277.3487.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length215
Homology
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 4.070e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:  140 PWTSREEVELPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKHR 212
            P ++R    LP E LTA A+A LK +  +C ICL DF + E  +RLPC+H+YH+ CI++WL+ S TCP CK R
Sbjct:  399 PASARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFR 471          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.090e-12
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 0
Query:  140 PWTSREEVELPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKHR 212
            P ++R    LP E LTA ++A LK +  +C ICL +F + E  +RLPC+H+YHS CI++WL+ S TCP CK R
Sbjct:  532 PASARAIAALPGETLTAGSLAHLKDDGRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFR 604          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: W5NE42_LEPOC (Ring finger protein 181 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NE42_LEPOC)

HSP 1 Score: 67.8 bits (164), Expect = 9.730e-11
Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 0
Query:  149 LPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
            LP  +++ +          +CP+CL +F  +E + ++PC H++HSGCI  WL ++N+CPVC+H
Sbjct:   63 LPTVIISPEQAGSAADRGLKCPVCLLEFEEEETVRKMPCQHLFHSGCIMPWLGKTNSCPVCRH 125          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: UPI001C4B92BF (E3 ubiquitin-protein ligase RNF181 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4B92BF)

HSP 1 Score: 67.4 bits (163), Expect = 1.530e-10
Identity = 21/46 (45.65%), Postives = 37/46 (80.43%), Query Frame = 0
Query:  166 TPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
            +P+CP+CL +F  +E + ++PC H++HSGC+  WL ++N+CP+C+H
Sbjct:   86 SPKCPVCLLEFEEEETVRKMPCQHLFHSGCLLPWLGKTNSCPLCRH 131          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A8J7NZ34_ATRSP (RN181 ligase (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NZ34_ATRSP)

HSP 1 Score: 66.6 bits (161), Expect = 2.960e-10
Identity = 22/44 (50.00%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  168 ECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
            +CP+CL +F  +E + ++PC H++HSGCI  WL ++N+CPVC+H
Sbjct:   78 KCPVCLLEFEEEETVRKMPCQHLFHSGCIMPWLGKTNSCPVCRH 121          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A835ICZ8_9MAGN (RING-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835ICZ8_9MAGN)

HSP 1 Score: 68.2 bits (165), Expect = 3.410e-10
Identity = 25/51 (49.02%), Postives = 39/51 (76.47%), Query Frame = 0
Query:  163 KRNTPE--CPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
            K N+ E  CP+CL +FC    ++ +PC HV+H+GCIK+WL+ ++TCP+C+H
Sbjct:  197 KENSEEGSCPVCLDEFCEGIEVTLMPCKHVFHNGCIKEWLQTNHTCPLCRH 247          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A834GIP1_RHOSS (RING-type domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GIP1_RHOSS)

HSP 1 Score: 66.6 bits (161), Expect = 6.540e-10
Identity = 24/44 (54.55%), Postives = 32/44 (72.73%), Query Frame = 0
Query:  169 CPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKHR 212
            C +C  DFC    I+R+PC HVYHSGCI  WL+ SN CP+C+++
Sbjct:  165 CAVCFEDFCHGSEIARMPCSHVYHSGCIVQWLKTSNLCPLCRYQ 208          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A8K0GY05_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GY05_9ROSA)

HSP 1 Score: 68.2 bits (165), Expect = 9.410e-10
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
Query:  147 VELPQEVLTADAVARLKRNTPECPICLADFCSKEVISRLP-CMHVYHSGCIKDWLRQSNTCPVCKHRAS 214
            +E  Q+V+  ++     RN   CPICLA++CSKE +  +P C H +H+ CI +WLR + TCPVC++  S
Sbjct:  615 IESYQKVVLGESRRLPGRNDTACPICLAEYCSKETLRCIPECKHCFHADCIDEWLRLNGTCPVCRNTPS 683          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: UPI000441AF65 (E3 ubiquitin-protein ligase RNF181 n=1 Tax=Python bivittatus TaxID=176946 RepID=UPI000441AF65)

HSP 1 Score: 62.8 bits (151), Expect = 1.400e-9
Identity = 20/44 (45.45%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  168 ECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
            +CP+CL +F  +E + ++PC H++H+GCI  WL ++N+CP+C+H
Sbjct:   10 KCPVCLLEFEEQEGVRKMPCQHLFHTGCILPWLGKTNSCPLCRH 53          
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Match: A0A444UV54_ACIRT (E3 ubiquitin-protein ligase RNF181 n=3 Tax=Acipenseroidei TaxID=186622 RepID=A0A444UV54_ACIRT)

HSP 1 Score: 64.7 bits (156), Expect = 1.560e-9
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
Query:  149 LPQEVLT-ADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWLRQSNTCPVCKH 211
            LP  V+T A A   LK     CP+CL +F  +E + ++PC H++HSGCI  WL ++N+CP+C+H
Sbjct:   63 LPTAVITPAQADKGLK-----CPVCLLEFEEEETVRKMPCEHLFHSGCILPWLGKTNSCPLCRH 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15277.3487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR18_ECTSI4.070e-1350.68RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L176_9PHAE2.090e-1249.32RING-type domain-containing protein n=1 Tax=Ectoca... [more]
W5NE42_LEPOC9.730e-1138.10Ring finger protein 181 n=2 Tax=Lepisosteus oculat... [more]
UPI001C4B92BF1.530e-1045.65E3 ubiquitin-protein ligase RNF181 n=1 Tax=Scelopo... [more]
A0A8J7NZ34_ATRSP2.960e-1050.00RN181 ligase (Fragment) n=1 Tax=Atractosteus spatu... [more]
A0A835ICZ8_9MAGN3.410e-1049.02RING-type domain-containing protein n=1 Tax=Coptis... [more]
A0A834GIP1_RHOSS6.540e-1054.55RING-type domain-containing protein n=1 Tax=Rhodod... [more]
A0A8K0GY05_9ROSA9.410e-1043.48Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
UPI000441AF651.400e-945.45E3 ubiquitin-protein ligase RNF181 n=1 Tax=Python ... [more]
A0A444UV54_ACIRT1.560e-945.31E3 ubiquitin-protein ligase RNF181 n=3 Tax=Acipens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 169..209
e-value: 2.1E-6
score: 37.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 168..210
e-value: 4.7E-13
score: 49.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 169..210
score: 12.475
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 130..214
e-value: 2.4E-19
score: 70.8
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 78..213
NoneNo IPR availablePANTHERPTHR45977:SF4TARGET OF ERK KINASE MPK-1coord: 78..213
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 144..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15277contigH-elongata_contig15277:4400..5044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15277.3487.1mRNA_H-elongata_contig15277.3487.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15277 4235..6372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15277.3487.1 ID=prot_H-elongata_contig15277.3487.1|Name=mRNA_H-elongata_contig15277.3487.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp
MPPFFLPLFASHSQTNPVARNVSMGHGPPMDPASAHATMMLEQHREIANR
ANSHMALALEHHRQMADYSRIRMARLIEHQREPAEQINSSPETLMQHHQG
ITDRTMFLQPPRRGEARSYYTVPAVGQHPFQGGRYSEERPWTSREEVELP
QEVLTADAVARLKRNTPECPICLADFCSKEVISRLPCMHVYHSGCIKDWL
RQSNTCPVCKHRAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD