prot_H-elongata_contig152256.3453.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: D7FME5_ECTSI (5'-3' exoribonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME5_ECTSI) HSP 1 Score: 126 bits (317), Expect = 4.680e-33 Identity = 52/57 (91.23%), Postives = 56/57 (98.25%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYYFEKFGITPLHT++H+RLRAAYVEGL+WCLAYYYRGCVSW WFFPFHYVPMISDL
Sbjct: 432 RYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 488
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A7S2RYD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RYD9_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.300e-24 Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYY+EK +TP + H +LR AY+EGLVWCLAYYYRGC+SW WF+P+HY PM+SDL
Sbjct: 153 RYYYEKLKLTPADVEGHLKLRQAYIEGLVWCLAYYYRGCISWGWFYPYHYGPMLSDL 209
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A7S1V112_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V112_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 8.660e-24 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYYFEK +TP+ H LR AY+EGL+WCLAYYY+GC+SW WF+P+H+ PM+SDL
Sbjct: 44 RYYFEKLKLTPVDKQEHYALRQAYIEGLMWCLAYYYKGCISWGWFYPYHFGPMLSDL 100
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.530e-23 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYYFEK +TP+ H LR AY+EGL+WCLAYYYRGC+SW WFFP+HY PM+SDL
Sbjct: 439 RYYFEKLKLTPVDVSGHHALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDL 495
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK) HSP 1 Score: 100 bits (248), Expect = 3.460e-23 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0
Query: 2 YYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
YY EK G+ P H H+RLR AY+EGL+WCLAYYY GCVSW WF+P+HY P+ISDL
Sbjct: 306 YYMEKLGLAPNHHQFHDRLRQAYIEGLIWCLAYYYEGCVSWGWFYPYHYGPLISDL 361
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 8.790e-23 Identity = 43/57 (75.44%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYYFEKFGITP+HT VH LR YV GL WCLA GCVSW WFFPFHYVPM+SDL
Sbjct: 432 RYYFEKFGITPVHTQVHSELRHQYVAGLQWCLA----GCVSWEWFFPFHYVPMLSDL 484
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A7S1UGZ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGZ5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.070e-22 Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYY+EK G+ P T V +RL +YVEGL+WCLAYYYRGCVSWSWF+PFHY P +SDL
Sbjct: 255 RYYYEKLGLLPNDTAVLQRLLRSYVEGLLWCLAYYYRGCVSWSWFYPFHYGPFLSDL 311
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A7S2KWL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KWL2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.250e-22 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDLV 58
RYY++KFG TP + H LR AY+EGLVW L YYYRGC SW W++P+HY PMISDLV
Sbjct: 177 RYYYDKFGFTPFDAEKHLALRKAYLEGLVWTLEYYYRGCPSWEWYYPYHYGPMISDLV 234
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.640e-22 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYYFEK +TPL + LR AY+EGL+WCLAYYYRGC+SW WFFP+HY PM+SDL
Sbjct: 439 RYYFEKMKLTPLDLEGQYALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDL 495
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Match: A0A7S2PSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSP2_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.240e-22 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0
Query: 1 RYYFEKFGITPLHTDVHERLRAAYVEGLVWCLAYYYRGCVSWSWFFPFHYVPMISDL 57
RYYFEK + P D H LR +Y+EGL+WCLAYYYRGC+SW WF+P+HY PMISDL
Sbjct: 448 RYYFEKLHLKPTDVDDHLALRKSYIEGLIWCLAYYYRGCISWGWFYPYHYGPMISDL 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152256.3453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig152256.3453.1 ID=prot_H-elongata_contig152256.3453.1|Name=mRNA_H-elongata_contig152256.3453.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bpback to top |