mRNA_H-elongata_contig15218.3448.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15218.3448.1
Unique NamemRNA_H-elongata_contig15218.3448.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: D8LM38_ECTSI (Excision repair helicase ercc-6-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM38_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 1.170e-60
Identity = 96/162 (59.26%), Postives = 114/162 (70.37%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPL------------GKDHKWDYVILDEGHKIKNRSTRTPIQNNMKELHTVVDWVTSGRLFGPYDHFKK 450
            QVT  LAGLF T QA  ALV+APKSVMRGWE EL  WLV+A+CP  +VVV+A +M    R+R I  A EGG    GAV++T+YGMVS+  + FAP              + H WDYVILDEGHKIKN ST+TP+QNN+KELHTVVDW T G+L GPY +FKK
Sbjct:   79 QVTCFLAGLFGTRQAKSALVLAPKSVMRGWEDELGRWLVRAACPKAEVVVMASEMPAKARRRAIALAAEGGSRGRGAVLITTYGMVSSNPKQFAPAVGGSGGWIEREEPRKHVWDYVILDEGHKIKNASTKTPVQNNLKELHTVVDWATFGKLLGPYKYFKK 240          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A6H5KD23_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD23_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.170e-34
Identity = 74/135 (54.81%), Postives = 87/135 (64.44%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQV----VVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPL------------GKDHKWDYVILDEGHKIKNRSTR 357
            QVT  LAGLF T QA  ALV+APKSVMRGWE EL  WLVKA+CP  +V    VV+A +M    R+R I  A EGG    GAV++T+YGMVS+  + FAP              + H WDYVILDEGHKIKN ST+
Sbjct:  545 QVTCFLAGLFGTRQAKSALVLAPKSVMRGWEDELGRWLVKAACPKAEVRQEVVVMASEMPAKARRRAIALAAEGGSRGRGAVLITTYGMVSSNPKQFAPAVGGSGGWIERGEPRQHVWDYVILDEGHKIKNASTK 679          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A1Z5KQS8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQS8_FISSO)

HSP 1 Score: 111 bits (278), Expect = 1.270e-25
Identity = 67/166 (40.36%), Postives = 89/166 (53.61%), Query Frame = 1
Query:   16 LAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEG--GDMDGGAVVVTSYGMVSARREHFAPLGKDHKWDYVILDEGHKIKNRSTRT--------------------PIQNNMKELHTVVDWVTSGRLFGPYDHFK 447
            L GL +      ALVVAPKSV+R WE E  + L+ A  P   V V++ D S  +RKR++  A+           +V+TSYGMV    + F    KD  WDYV+LDEGH IKNR T+T                    PI NN++EL T+ DW+++GRL G +  FK
Sbjct:  228 LGGLMNAGTICNALVVAPKSVLRSWEREASKVLL-ACVPIAMVQVMSADHSPLQRKRILADALAARRSKSQRPQLVITSYGMVEKCTDLFLGGAKD-VWDYVVLDEGHTIKNRRTKTHACCQSICKNKTKRIMLTGTPIMNNVEELWTIFDWISAGRLLGDFSTFK 391          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A7S2E6H2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6H2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.750e-25
Identity = 62/172 (36.05%), Postives = 94/172 (54.65%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPLGKDHK--WDYVILDEGHKIKNRSTR---------------------TPIQNNMKELHTVVDWVTSGRLFGPYDHFK 447
            Q  + L GL  ++    AL++ P S+MR WE E ++ L +   P + + VLA D+   +R  ++  A+         +V+T+YG+VS+      P+  + +  WDYV+LDEGHKIKN +T+                     TPIQNN+KEL ++VDWVT+GRLFG    F+
Sbjct:  407 QTLTYLGGLMKSKTIRNALIICPVSLMRTWEREARDILERCCVPRITISVLASDVRKPRRHDILVDALTTS-YKYPQLVITTYGLVSSNPLDLIPVENEQERLWDYVVLDEGHKIKNPTTKVTKGCHRICRNEHTRRLLLTGTPIQNNLKELWSLVDWVTNGRLFGKLTTFR 577          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A1E7FBA8_9STRA (SNF2_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBA8_9STRA)

HSP 1 Score: 101 bits (251), Expect = 5.130e-22
Identity = 59/168 (35.12%), Postives = 87/168 (51.79%), Query Frame = 1
Query:   10 SLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAP-LGKDHKWDYVILDEGHKIKNRST---------------------RTPIQNNMKELHTVVDWVTSGRLFGPYDHFK 447
            SLL GL   +     L+VAP SV+R W  E  + L       + + V+A D+S  KRK+ + QA+E        +++T++G+VS   +HF   +     WDYV+LDE HKIKN +T                      TPI NN+ ELH++  + TSG++ GPY  F+
Sbjct:   51 SLLGGLMKAKTIQKVLIVAPVSVLRNWANEAIKILRNCINLKINIEVIASDVSIQKRKKKLHQALEAQIPQ---LIITTFGLVSNNPDHFTQRVAGSGVWDYVVLDEAHKIKNPNTIISTNMKVIAHSARTRRLILTGTPIMNNLNELHSLFTFATSGKILGPYKEFQ 215          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: UPI000B459081 (DNA excision repair protein ERCC-6-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B459081)

HSP 1 Score: 100 bits (249), Expect = 1.030e-21
Identity = 60/167 (35.93%), Postives = 85/167 (50.90%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPL-GKDHKWDYVILDEGHKIKNRS-----------------TRTPIQNNMKELHTVVDWVTSGRLFGPYDHFK 447
            QV + L+GLF   +    L+V P S++  WE E  +W      P ++V  L H  S  +++R +C+    G      V +TSYG+V    E  +   G+D +WDY+ILDEGHKIKN +                 T TP+QNN+KEL  + D+V  G L G    FK
Sbjct:  176 QVIAFLSGLFDMNKVHAVLIVMPVSLITNWEKEFNKW-----APGIRVT-LFHGSSKREKERALCKVQRRG-----GVCLTSYGLVVTSSEQLSQKEGRDFEWDYMILDEGHKIKNPTKTTKGVHAIGAKNRIILTGTPVQNNLKELWALFDFVHKGTLLGTARTFK 331          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A6J8B126_MYTCO (ERCC6L n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B126_MYTCO)

HSP 1 Score: 97.8 bits (242), Expect = 9.150e-21
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPL-GKDHKWDYVILDEGHKIKNRS-----------------TRTPIQNNMKELHTVVDWVTSGRLFGPYDHFK 447
            QV S L+GLF  ++    L+V P S++  WE E Q+W      P ++V    H  S  +++R +C+    G      V++TSYG+V    E      G++  WDYV LDEGHKIKN +                 T TPIQNN+KEL  + D+V  G L G    FK
Sbjct:  561 QVISFLSGLFDMDKVKSVLIVMPVSLIVNWEKEFQKW-----APGIRVEAY-HGSSKKEKERALCKVQRRG-----GVLLTSYGLVVTSSEVIGKQDGREFVWDYVALDEGHKIKNPTKTTKGVHAIPARNRIILTGTPIQNNLKELWALFDFVHQGSLLGTARTFK 716          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A8B6BYE1_MYTGA (DNA excision repair protein ERCC-6-like n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BYE1_MYTGA)

HSP 1 Score: 97.8 bits (242), Expect = 9.160e-21
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPL-GKDHKWDYVILDEGHKIKNRS-----------------TRTPIQNNMKELHTVVDWVTSGRLFGPYDHFK 447
            QV S L+GLF  ++    L+V P S++  WE E Q+W      P ++V    H  S  +++R +C+    G      V++TSYG+V    E      G++  WDYV LDEGHKIKN +                 T TPIQNN+KEL  + D+V  G L G    FK
Sbjct:  575 QVISFLSGLFDMDKVKSVLIVMPVSLIVNWEKEFQKW-----APGIRVEAY-HGSSKKEKERALCKVQRRG-----GVLLTSYGLVVTSSEVIGKQDGREFVWDYVALDEGHKIKNPTKTTKGVHAIPARNRIILTGTPIQNNLKELWALFDFVHQGALLGTARTFK 730          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A7M7J336_VARDE (Uncharacterized protein n=4 Tax=Varroa TaxID=62624 RepID=A0A7M7J336_VARDE)

HSP 1 Score: 97.4 bits (241), Expect = 1.210e-20
Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPL-GKDHKWDYVILDEGHKIKNRS-----------------TRTPIQNNMKELHTVVDWVTSGRLFGPYDHFKK 450
            QV S LAGL+  E+ +  L+V P S++  W  E ++W       A  + V  H   T K K V+ + +    M+ G V++T+YGMV+ R E      G++  WDY+ILDEGH+IKN +                 T T +QNN++EL ++  +   G LFG    FK+
Sbjct:  121 QVISFLAGLYDMEKISSVLLVMPVSLIGNWMTEFEKW-------APGIKVFDHHAGTNKEKEVVLRKV----MNRGGVILTTYGMVTTRHEELCQKNGRNFVWDYIILDEGHRIKNPTKTQKAVFGLLAKHRLVLTGTAVQNNLRELWSLFHFTHQGMLFGNLAGFKQ 277          
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Match: A0A7S1NDF6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NDF6_9EUGL)

HSP 1 Score: 96.7 bits (239), Expect = 2.230e-20
Identity = 59/167 (35.33%), Postives = 89/167 (53.29%), Query Frame = 1
Query:    1 QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVVLAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPLGKDHKWDYVILDEGHKIKNRSTR------------------TPIQNNMKELHTVVDWVTSGRLFGPYDHFK 447
            Q+ S L G+F  ++   AL+V P S++  W AE + W  K       +V   H+++  +RKR++ Q      + GG V VTSYG++++  E F   G +  WDY+ILDEGHK+KN S +                  TPIQNN+ EL ++ D++  G+L G    FK
Sbjct:  399 QIISFLNGMFHAQRIKYALIVMPVSLLENWCAEFERWAPKL------LVERLHEVTVERRKRLLRQL----HLYGG-VCVTSYGLITSNVEVFEDSGIN--WDYIILDEGHKVKNPSIKLSKNVRKIEVKHRVILSGTPIQNNLTELWSLFDFICMGKLLGSQAEFK 552          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15218.3448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM38_ECTSI1.170e-6059.26Excision repair helicase ercc-6-related n=1 Tax=Ec... [more]
A0A6H5KD23_9PHAE1.170e-3454.81Helicase ATP-binding domain-containing protein n=1... [more]
A0A1Z5KQS8_FISSO1.270e-2540.36Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2E6H2_9STRA1.750e-2536.05Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FBA8_9STRA5.130e-2235.12SNF2_N-domain-containing protein n=1 Tax=Fragilari... [more]
UPI000B4590811.030e-2135.93DNA excision repair protein ERCC-6-like n=1 Tax=Mi... [more]
A0A6J8B126_MYTCO9.150e-2136.53ERCC6L n=1 Tax=Mytilus coruscus TaxID=42192 RepID=... [more]
A0A8B6BYE1_MYTGA9.160e-2136.53DNA excision repair protein ERCC-6-like n=2 Tax=My... [more]
A0A7M7J336_VARDE1.210e-2034.52Uncharacterized protein n=4 Tax=Varroa TaxID=62624... [more]
A0A7S1NDF6_9EUGL2.230e-2035.33Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15218contigH-elongata_contig15218:4606..7589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score196.1
Seed ortholog evalue1.2e-47
Seed eggNOG ortholog2880.D8LM38
Preferred nameERCC6L
KEGG koko:K20093
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008094,GO:0015616,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0042623,GO:0044424,GO:0044444,GO:0044464,GO:0140097
EggNOG free text desc.histone H2A-H2B dimer displacement
EggNOG OGsCOG0553@1,KOG0387@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionSNF2-related helicase domain protein
Ec32 orthologEc-06_002330.1
Exons3
Model size456
Cds size456
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15218.3448.1prot_H-elongata_contig15218.3448.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15218 4606..7589 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929899.8788652-CDS-H-elongata_contig15218:4605..47051622929899.8788652-CDS-H-elongata_contig15218:4605..4705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15218 4606..4705 -
1691679200.5170448-CDS-H-elongata_contig15218:4605..47051691679200.5170448-CDS-H-elongata_contig15218:4605..4705Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15218 4606..4705 -
1622929899.897537-CDS-H-elongata_contig15218:6157..63721622929899.897537-CDS-H-elongata_contig15218:6157..6372Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15218 6158..6372 -
1691679200.5279768-CDS-H-elongata_contig15218:6157..63721691679200.5279768-CDS-H-elongata_contig15218:6157..6372Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15218 6158..6372 -
1622929899.9119682-CDS-H-elongata_contig15218:7448..75891622929899.9119682-CDS-H-elongata_contig15218:7448..7589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15218 7449..7589 -
1691679200.5369666-CDS-H-elongata_contig15218:7448..75891691679200.5369666-CDS-H-elongata_contig15218:7448..7589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15218 7449..7589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15218.3448.1

>prot_H-elongata_contig15218.3448.1 ID=prot_H-elongata_contig15218.3448.1|Name=mRNA_H-elongata_contig15218.3448.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
QVTSLLAGLFSTEQATCALVVAPKSVMRGWEAELQEWLVKASCPAVQVVV
LAHDMSTAKRKRVICQAMEGGDMDGGAVVVTSYGMVSARREHFAPLGKDH
KWDYVILDEGHKIKNRSTRTPIQNNMKELHTVVDWVTSGRLFGPYDHFKK
T*
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mRNA from alignment at H-elongata_contig15218:4606..7589-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15218.3448.1 ID=mRNA_H-elongata_contig15218.3448.1|Name=mRNA_H-elongata_contig15218.3448.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2984bp|location=Sequence derived from alignment at H-elongata_contig15218:4606..7589- (Himanthalia elongata Himel1 dioecious)
CAGGTGACTTCTCTTCTCGCGGGCCTGTTTTCCACCGAGCAGGCCACGTG CGCCCTCGTGGTGGCCCCCAAGAGCGTCATGCGCGGCTGGGAGGCCGAAC TCCAAGAATGGCTGGTCAAGGCGTCATGTCCCGCGGTCCAGGTGTCTTGC AAGTGTTGGCGTATTTCGCTTTCGCATGCGCGCCTTCATGCCACCCCCCC CCCTCACCCTCGCTGTCTGATTATGCCCCTGTGCTGCGTTGATCTTACCG CCGCGTAAATCGTCTGAAAAAGCCACAAAACGTACTAATTGGCAATCGCG TATAGTATAGTATTAGTAGTAGGGTATCGTTGACGCCCGATCGATTAATT TGAAAAACGACCAATCCAAGGATTGGAGGAGGGAGGGGACGTAACATCAT TGTCCCCGCTTTTCGGAGGGGAGGGTCCTATTTCGTCCCCTTCCGGGGAT TGAATCGGCGTATCCCCGGTTGTAGCACTCCAGATGTGATAGCTGATTAC AACAAAAAGGGGATTGTCACGTTTTGTCCCCTGGAGGGGAAGAATTTCAC ACGTCCCCTTCATGAACTGGAGGCGTTTTCTCAAGTTCGCCCCTCCCCCC TATGGTTGGATTGCTCAAACATGTACACACACACACACACACACACACAC AAACCCTCACACATAATATACGTATTTGTTTGAGAGTCTGTAGCAGACCA GGCAGTTACCATCACGAGCCCGTACGAGCACTCGCGCGGATACGCGCGAC AATCCACGCGCTCTTGAGAGCAACTGCCTGGTCTGCTACAGACTTTTGAA CAAATATGTACATTATGTGTATGAGTTTGTGTGCGTGTGCATGTTTTTCA AATTAACCGATCGAGCTTCAACCATACCCCACTACTAATAATATACTATA CTATACTATACTATACGCGGTTGCCAATTAATACGTTTGTGGCTTATTTG TGCAGAATAATAATAAAATAAAATAAAACACACACACACACACACACATA GGCACAAAATCTTGATATGTTTAAAAATAAAAAGACAAACCGAACGCATC AAAATCTAGACTACTCCAGTGCTGGAGAGTAGCAACACTTAAAACGGCGT CCCAGGGTAGATCTCCAGGGTGGAAGATGAGCAGTAAACTAGGGTGCCGT TCACCATGCCTTCTCTGGCTCCACACAGACGCCCCCCAAAACAAACAAAA CAAACAAACATGGCCAGGTGGTGGTCTTGGCGCACGATATGTCGACGGCA AAGAGGAAGAGGGTGATTTGCCAAGCGATGGAGGGCGGTGACATGGACGG AGGGGCTGTGGTGGTGACGAGCTACGGGATGGTGTCCGCGAGGCGGGAGC ACTTCGCCCCGCTGGGCAAGGACCACAAGTGGGACTACGTTATCCTCGAC GAGGGTCACAAGATCAAGAATCGCTCCACGAGGTTGCACACATCTCACAC TCGTACTCGCGCGCGCTCTGTTGATGCTCTCGGGGGCTGGGGTGGGGAGA CAGAAGCTTCGTCCGGGGGCCTGGAAGCACCATTTGTAGTGTTTTTGTAT GTATAACGTTGAAGGGTTATTGTGTGTGTGTGTGTGTGTGTGTGTTGTTT TCTACTGTTTTTTTGCGTTATTTTGATCGGAGTCCTGTTCTCGTATAGCA GGTAATCTTGAGAGTTTCCGATCTCCTTTTAACCCGGGCGTTAGTTGGAC GGTTACTACCGCTGTCAGAGAGAGCACGGATGATAACGATAACGATAACG AGAGTGCGCGGTGCGCCGTACGCCGTATGCTGTCGTGCCGGAGAAATAAT GCCCGTCTTCAGAAGGCGGGCTGCTTTCCGCCGTGCCTTTCCAGCAACTC TACTCCAACACCTCGCGACTTTTTTTCGCCACTGATTTATGTCGCGTTGG CCCGCAATTGCGCTCAAGCTGTCGCCGCCGTAGGCCTGCTCTAGCTGTGA GGTCGTTGTTGTTGTTTTTAACCCTTTTGGGACTGGATTTCAAATTTTAT ATTCAATTTAGTATGAAAAAAAACAGATTGAATTCCATAGGGGTTAATAT ATATATATAATATATATATAGAGAAAGAGAGTTAACTTTCGACGTAGATG CCGTCCGGTGCGGGTACTGCGCGTTTTTCAACTTCCCCGAAAAGGGTTTC GTACCCCCGTGAGATTGAATGCTATTTGTCGACCCTGCTGAAAACGAACC TTTCCCCAAAATAATCCGGGTTTTCCGGTTTGGGTGGAGGAAAATCGTCC ACGTGCGGGGTGCGCGTGTGTTTAAATACCGTGGGTGCTTCGGTTAGCAA CATACCAACCCCGGGCGTGCCTAATCCAAGGTCCACTCAACTCCACCCGC GCGCCCGTTGCTCGTCGTGGTGCCCGCTCGGTCTCAACTATCACTCAACT TACTCCTACCTACTCACATACTGTACGATAATTGCAGGACGTGCAAGGCG GTGCACGATGTTCCCGCCCGGCGACGTCTGGTCCTTACGGGGTGCGTTAC GTGACGCTACGTTACGATTCCCTCGACTTGTTGCGGTTATTTTTTGAAGA AGACAAGCGCGGGCGGGGGGATACGACTGTTATTTAGGCGGCGCCCCATC TTTATTTGCTCGAGGAAATGTTCTCCCGCGACTCGCGCGTGCGCGCGATG CTTCCCTCCCTCAACCCCCACCGCGCGCTCCGTCTTGGCTTGACAGACTG CACTCAGTAAAATTTATGGTACGGGTACGGCACAGCTGCCCGTCACCGCG GCCGTCCTCCTGGTCTCGTTCGTCACGGACGTAGCTTGTCCGAAAAATAA AATGTTATTAAATCCGCCCATTCCCGCTTTCTTCTCCCCCCGTCCCCCGC GTGCGCGCCGTCAAATCCGCCTTCGTCCGGTAAGAACTCCGATCCAGAAC AACATGAAGGAGCTGCATACCGTGGTGGACTGGGTGACCTCCGGACGCCT TTTTGGGCCGTACGATCACTTCAAGAAAACGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig15218:4606..7589-

>mRNA_H-elongata_contig15218.3448.1 ID=mRNA_H-elongata_contig15218.3448.1|Name=mRNA_H-elongata_contig15218.3448.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig15218:4606..7589- (Himanthalia elongata Himel1 dioecious)
CAGGTGACTTCTCTTCTCGCGGGCCTGTTTTCCACCGAGCAGGCCACGTG
CGCCCTCGTGGTGGCCCCCAAGAGCGTCATGCGCGGCTGGGAGGCCGAAC
TCCAAGAATGGCTGGTCAAGGCGTCATGTCCCGCGGTCCAGCAGGTGACT
TCTCTTCTCGCGGGCCTGTTTTCCACCGAGCAGGCCACGTGCGCCCTCGT
GGTGGCCCCCAAGAGCGTCATGCGCGGCTGGGAGGCCGAACTCCAAGAAT
GGCTGGTCAAGGCGTCATGTCCCGCGGTCCAGGTGGTGGTCTTGGCGCAC
GATATGTCGACGGCAAAGAGGAAGAGGGTGATTTGCCAAGCGATGGAGGG
CGGTGACATGGACGGAGGGGCTGTGGTGGTGACGAGCTACGGGATGGTGT
CCGCGAGGCGGGAGCACTTCGCCCCGCTGGGCAAGGACCACAAGTGGGAC
TACGTTATCCTCGACGAGGGTCACAAGATCAAGAATCGCTCCACGAGGTG
GTGGTCTTGGCGCACGATATGTCGACGGCAAAGAGGAAGAGGGTGATTTG
CCAAGCGATGGAGGGCGGTGACATGGACGGAGGGGCTGTGGTGGTGACGA
GCTACGGGATGGTGTCCGCGAGGCGGGAGCACTTCGCCCCGCTGGGCAAG
GACCACAAGTGGGACTACGTTATCCTCGACGAGGGTCACAAGATCAAGAA
TCGCTCCACGAGAACTCCGATCCAGAACAACATGAAGGAGCTGCATACCG
TGGTGGACTGGGTGACCTCCGGACGCCTTTTTGGGCCGTACGATCACTTC
AAGAAAACGTGAAACTCCGATCCAGAACAACATGAAGGAGCTGCATACCG
TGGTGGACTGGGTGACCTCCGGACGCCTTTTTGGGCCGTACGATCACTTC
AAGAAAACGTGA
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