prot_H-elongata_contig15202.3444.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig15202.3444.1
Unique Name	prot_H-elongata_contig15202.3444.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	252

Homology

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BLAST of mRNA_H-elongata_contig15202.3444.1 vs. uniprot
Match: D8LME4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME4_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 2.760e-112
Identity = 174/245 (71.02%), Postives = 214/245 (87.35%), Query Frame = 0

Query:    8 NKVNRVGELKLALEEGARALAQSRSQLEAVRAESGAERTAQEEKARFEAHRPRRVPPAPYRFDIVANGVNIRSYRSASMIAQNLSVRAWMVLTQPCRPWCNGGPEEESTMYAGVWDALGFLPNNDPMFAREALDVTILLDQLDLSLTRGQYATILAIIMDNFAEPWAVCPPVIEWPRRDPEVSEGVCRDALKGRRTAQTVPVYARRLRLTVSEDEEAFFYAPNQGSLDHGRRDWVAERKATEARS 252
            N+VNRVG+LKL+L+E    L + RS+L +VR E+ AERTAQ EKARFEAHRP RVPPAP RFD+VA+GV IRSYRSAS++A++LS+RAWMV+  P RPWC GG  +ES M+ GVWD+LGFLPN DPMFA+EALDVT+L+D+LD SLTR QY+TI++I+MDNF EPW++CPPVIEWP+RDPEVS+GVCRD L+GRRTAQ+VPVYARRLRLTVSE+EEA+F+APN+  LDH RRDWV++R+A EA S
Sbjct:  754 NQVNRVGDLKLSLDERVETLKRVRSRLGSVRREANAERTAQSEKARFEAHRPSRVPPAPSRFDMVASGVTIRSYRSASLVAEDLSLRAWMVVATPLRPWCGGGAAKESGMFPGVWDSLGFLPNRDPMFAKEALDVTVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQSVPVYARRLRLTVSENEEAYFFAPNEEPLDHHRRDWVSKRRAEEAAS 998

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BLAST of mRNA_H-elongata_contig15202.3444.1 vs. uniprot
Match: A0A6H5K463_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K463_9PHAE)

HSP 1 Score: 363 bits (931), Expect = 1.030e-111
Identity = 173/243 (71.19%), Postives = 212/243 (87.24%), Query Frame = 0

Query:    8 NKVNRVGELKLALEEGARALAQSRSQLEAVRAESGAERTAQEEKARFEAHRPRRVPPAPYRFDIVANGVNIRSYRSASMIAQNLSVRAWMVLTQPCRPWCNGGPEEESTMYAGVWDALGFLPNNDPMFAREALDVTILLDQLDLSLTRGQYATILAIIMDNFAEPWAVCPPVIEWPRRDPEVSEGVCRDALKGRRTAQTVPVYARRLRLTVSEDEEAFFYAPNQGSLDHGRRDWVAERKATEA 250
            N+VNRVG+LKL+L+E    L + RS+LE+VR E+ AERT Q EKARFEAHRP RVPPAP RFD+VA+GV IRSYRSAS++A+NLS+RAWMV+  P RPWC GG  +ES M+ GVWD+LGFLPN DPMFA+EALD+T+L+D+LD SLTR QY+TI++I+MDNF EPW++CPPVIEWP+RDPEVS+GVCRD L+GRRTAQ+VPVYARRLRLTVSEDEEA+F+APN+  LD  RRDWV++R+A EA
Sbjct: 1745 NQVNRVGDLKLSLDERVETLKRVRSRLESVRREANAERTVQSEKARFEAHRPSRVPPAPSRFDMVASGVTIRSYRSASLVAENLSLRAWMVVATPLRPWCGGGDAKESGMFPGVWDSLGFLPNRDPMFAKEALDLTVLIDELDASLTRSQYSTIMSIVMDNFPEPWSICPPVIEWPKRDPEVSQGVCRDPLEGRRTAQSVPVYARRLRLTVSEDEEAYFFAPNEEPLDRNRRDWVSKRRAEEA 1987

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig15202.3444.1 vs. uniprot

BLAST of mRNA_H-elongata_contig15202.3444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LME4_ECTSI	2.760e-112	71.02	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K463_9PHAE	1.030e-111	71.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..40

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig15202	contig	H-elongata_contig15202:3543..6642 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig15202.3444.1	mRNA_H-elongata_contig15202.3444.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig15202 3543..6642 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig15202.3444.1 ID=prot_H-elongata_contig15202.3444.1|Name=mRNA_H-elongata_contig15202.3444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
MNFDSATNKVNRVGELKLALEEGARALAQSRSQLEAVRAESGAERTAQEE
KARFEAHRPRRVPPAPYRFDIVANGVNIRSYRSASMIAQNLSVRAWMVLT
QPCRPWCNGGPEEESTMYAGVWDALGFLPNNDPMFAREALDVTILLDQLD
LSLTRGQYATILAIIMDNFAEPWAVCPPVIEWPRRDPEVSEGVCRDALKG
RRTAQTVPVYARRLRLTVSEDEEAFFYAPNQGSLDHGRRDWVAERKATEA
RS