prot_H-elongata_contig151933.3434.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151933.3434.1
Unique Nameprot_H-elongata_contig151933.3434.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length131
Homology
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BLAST of mRNA_H-elongata_contig151933.3434.1 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 7.670e-23
Identity = 59/121 (48.76%), Postives = 75/121 (61.98%), Query Frame = 0 
Query:   16 PSLVEWCANNADLLLPWISGEDGLAI-PGLAGLLHVLVLLSPSVTEAQRGYLVTIGFHSKLIRLFKWTIDTMRREHKH--RGRQGK--------PRAKAAEWPRYLTPCLLLLDLLAKPSN 125
            PSLV  C   A+ +LP  +G    A+ PGLAG+LHVL+LL+   TEAQR  LVT GFH KL+ LFK T+  +RR  +   +G  G              A+WP Y+TPCLLLLDL+AKPS+
Sbjct:  644 PSLVLSCIRRAEAMLPSEAGVSAAAVRPGLAGILHVLLLLATGATEAQRRALVTTGFHVKLLELFKTTMAELRRARRADMKGESGDCGXXXXXXXXXXTADWPEYMTPCLLLLDLVAKPSS 764
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151933.3434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6M1_9PHAE7.670e-2348.76UBA domain-containing protein (Fragment) n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151933contigH-elongata_contig151933:247..1158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151933.3434.1mRNA_H-elongata_contig151933.3434.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151933 245..1158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151933.3434.1 ID=prot_H-elongata_contig151933.3434.1|Name=mRNA_H-elongata_contig151933.3434.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp
ETPSNVFLPNDSLDVPSLVEWCANNADLLLPWISGEDGLAIPGLAGLLHV
LVLLSPSVTEAQRGYLVTIGFHSKLIRLFKWTIDTMRREHKHRGRQGKPR
AKAAEWPRYLTPCLLLLDLLAKPSNALAPLV
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