prot_H-elongata_contig15105.3393.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15105.3393.1
Unique Nameprot_H-elongata_contig15105.3393.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 3.720e-26
Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 MSWCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTKRVASN 80
            ++WCGKVYS GQV H+P+RL GL  MRRP   GELM+FLQ  NW+R  LPRMAEV+ P R  L+ H+ G++SRTKRVA N
Sbjct:  953 ITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAEN 1032          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.240e-25
Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 MSWCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTKRVASN 80
            + WCGKVYSGGQV H+P RL GL  MRRP   GELM+ LQ  NW+R  LPR+AEV+ P R++L++H+A +  RTKR+ASN
Sbjct:  781 IKWCGKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASN 860          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.970e-19
Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTKRVASN 80
            WCGKVYSGGQV  +P+RL GLT MRRP   G+LM+FLQ   W+R  L R+AEV+ P R +L+ ++A +  +TK +A N
Sbjct:  608 WCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPN 685          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A0G4J2M7_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J2M7_PLABS)

HSP 1 Score: 55.1 bits (131), Expect = 3.660e-7
Identity = 20/61 (32.79%), Postives = 37/61 (60.66%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQML 63
            WCGK+YSG  + H+P+R+  LT M  P+ + +L + +    W+R  +P    +I P ++++
Sbjct:   61 WCGKIYSGNGIRHDPERIAALTSMPEPKTVKDLQQLMWAVGWMRTTIPDYPYIIEPLQEVV 121          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: W4F9Z7_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4F9Z7_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.410e-7
Identity = 25/78 (32.05%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTK-RVAS 79
            WCG+  S   ++H+P+R+ GLT +  P    +L +F+   NW+R+ +P+   ++AP + +L+     + +R K R+AS
Sbjct:  921 WCGRRVSAAGISHDPERIAGLTGLSTPTTADQLQQFICALNWMRQSIPQYNPLVAPLQALLEVVCTAAGTRKKTRLAS 998          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A6A4Z8T2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z8T2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.520e-7
Identity = 25/78 (32.05%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTK-RVAS 79
            WCG+  S   ++H+P+R+ GLT +  P    +L +F+   NW+R+ +P+   ++AP + +L+     + +R K R+AS
Sbjct:  990 WCGRRVSAAGISHDPERIAGLTGLSTPTTADQLQQFICALNWMRQSIPQYNPLVAPLQALLEVVCTAAGTRKKTRLAS 1067          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: H3H8C5_PHYRM (RNA-directed DNA polymerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8C5_PHYRM)

HSP 1 Score: 52.4 bits (124), Expect = 5.500e-6
Identity = 26/77 (33.77%), Postives = 43/77 (55.84%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTKRVAS 79
            WCGK++SG  + H+P R+ GL  +  P    +L +FL  A W+R  +   + V+ P   +L+  +     RTKR+A+
Sbjct:  735 WCGKIFSGEGIAHDPARVSGLQSLPLPVTAADLQQFLCAAGWLRDSIMDYSRVMQPLHILLEAALQ-QVGRTKRLAA 810          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A6A4BBJ8_9STRA (Uncharacterized protein n=5 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4BBJ8_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 7.480e-6
Identity = 26/77 (33.77%), Postives = 43/77 (55.84%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTKRVAS 79
            WCGK++SG  + H+P R+ GL  +  P    +L +FL  A W+R  +   + V+ P   +L+  +     RTKR+A+
Sbjct:  108 WCGKIFSGEGIAHDPARVSGLQPLPLPVTAADLQQFLCAAGWLRDSIMDYSRVMQPLHILLEAALQ-QVGRTKRLAA 183          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A6A3L091_9STRA (RNA-directed DNA polymerase n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L091_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.040e-5
Identity = 25/73 (34.25%), Postives = 37/73 (50.68%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTK 75
            WCGK+ SG  + H+P+RL  L  +  P  +  L +FL   NW+R  L   A + AP  + L+  +     R K
Sbjct:  565 WCGKMVSGTDIQHDPERLSALANLPPPPTVAALQQFLCAVNWVRDSLIDYARIAAPLYECLEQQMRVIGKRNK 637          
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Match: A0A2P4Y2Z2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2Z2_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.150e-5
Identity = 27/77 (35.06%), Postives = 42/77 (54.55%), Query Frame = 0
Query:    3 WCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLPRMAEVIAPFRQMLKDHIAGSQSRTKRVAS 79
            WCG+++SG  V H+P+RL GL  +  P    +L +FL    W+R  L   + V+ P    L + +     RTKR+A+
Sbjct:  139 WCGRLFSGVGVRHDPERLSGLHQLPLPSTAADLQQFLCATGWMRDSLMDYSRVMQPLHDKL-EAVLKVVGRTKRLAA 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15105.3393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE3.720e-2662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9E0_9PHAE3.240e-2560.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE3.970e-1953.85CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0G4J2M7_PLABS3.660e-732.79Reverse transcriptase domain-containing protein n=... [more]
W4F9Z7_9STRA8.410e-732.05Reverse transcriptase domain-containing protein n=... [more]
A0A6A4Z8T2_9STRA8.520e-732.05Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
H3H8C5_PHYRM5.500e-633.77RNA-directed DNA polymerase n=1 Tax=Phytophthora r... [more]
A0A6A4BBJ8_9STRA7.480e-633.77Uncharacterized protein n=5 Tax=Phytophthora fraga... [more]
A0A6A3L091_9STRA1.040e-534.25RNA-directed DNA polymerase n=6 Tax=Phytophthora T... [more]
A0A2P4Y2Z2_9STRA1.150e-535.06Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 22..79
e-value: 1.2E-6
score: 30.4
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15105contigH-elongata_contig15105:6150..6389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15105.3393.1mRNA_H-elongata_contig15105.3393.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15105 6150..6404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15105.3393.1 ID=prot_H-elongata_contig15105.3393.1|Name=mRNA_H-elongata_contig15105.3393.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MSWCGKVYSGGQVTHNPQRLCGLTIMRRPRRMGELMRFLQTANWIRKFLP
RMAEVIAPFRQMLKDHIAGSQSRTKRVASN
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