mRNA_H-elongata_contig14969.3323.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI) HSP 1 Score: 523 bits (1346), Expect = 1.500e-168 Identity = 284/545 (52.11%), Postives = 366/545 (67.16%), Query Frame = 1
Query: 1 LLSLLP--GTKQDLKGIKERLKRKVPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGR-GNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNE-NSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVET-FAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGV----------DRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
LL+LL GT++D IK R K VS GKPVLIVCP + +W HL+ WG+FE+ + S G +S+Q VE+RL AG LEVV +G +F + + +++F WL VFDE H KNP + +++AV+ LV AEVF+GLTGTL+QN L E+W L+N +Q G + +F +F PIL G+++GA + +V L R+ E+G RDK+VLRR K+ +LG+LL GK GTVVFC L VQK +YRT+L LPE +LLA A+DPC CGR + SG CCG+WP+DD+S+D V RAV+WR++HP LE C P CPYCC + KLQK+ANHP LLQV+ + + +A FA VAF+E+AR++M D + GG G DRRL R ENFLQL RDD CGKM+TLKVLL RF+ KVLLFSYSTA LD+LQ L +GYTFL+LDG T ++R +I R+ +++AI + VFLIST AGGTGLNL +A+KVILYDVNWNP+QD QAEDRAYRIGQ VEV
Sbjct: 327 LLALLKKTGTRRDRMDIKRRKDCKGHVSVA--GKPVLIVCPRSVLPNWTGHLKTWGHFETACITSGGSTAGPESLQRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGVTRDKVVLRRVKD-ILGDLLKGKIGTVVFCNLTHVQKLVYRTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGENAHKMLDDIAFANVAFSEEARVIMA--DLPGQHGGGAVSGSSIGXXXXXXXXXXXXEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 865
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI) HSP 1 Score: 379 bits (972), Expect = 7.420e-115 Identity = 226/527 (42.88%), Postives = 310/527 (58.82%), Query Frame = 1
Query: 19 GTKQDLKGIKERLKRKVPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRN--ENSGKCCGVWPRD-DSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
GT +D + ++ R K +P S+ G P LIV P+ V W + ++ WG+F + + S + + L AG EVV YDL D + K ++ V+FDE H +K+ + SQA L VF GLTGTLIQN++ E W+L+++I + S F E+F PI + A + L +RL+EL IRDK ++RRTK++ LG++L GK+ TVVFC L+ VQ+E+Y+ +L LPE +LLA A +PC CGR+ +CC P D V RAVL+R+ HP L C CP+CC LP + KLQK+ANHPCLLQ E R+Q +FAEVAFT++AR +M GG L RS+ FL +S+ +CGKMK+L+ LL +F KVL+FS+STA LD+L+ + +GY + RLDG T +ER A I +N D FVFLIST+AGG GLNLH+A++V+LYDVNWNP+ QA+DRAYRIGQ +V V
Sbjct: 510 GTGRDSEELRRRRKEGLPASST--GLPWLIVAPAAVVPEWIKQIKVWGHFAAYQLESG-----RDADDLMVALKAGRYEVVATSYDLLRACVDRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKRVF-GLTGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLGEKRLKELDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAKEPCNCGRSGRPTRARCCHKTPDSRGGGGDGVDPRAVLFRRLHPTLMECD---KCPFCCQLPAVSKLQKIANHPCLLQENIRDPEHK---RQQQRQFAEVAFTDRAREIM---------GG----------------LERSQKFLDVSKVGVCGKMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNS-DRAGVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKVAV 996
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A453B8D7_AEGTS (Uncharacterized protein n=2 Tax=Poaceae TaxID=4479 RepID=A0A453B8D7_AEGTS) HSP 1 Score: 287 bits (734), Expect = 4.710e-87 Identity = 176/508 (34.65%), Postives = 267/508 (52.56%), Query Frame = 1
Query: 76 STGKGGK--PVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPK-LETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
ST KG K PVLI+CP+ + +W +W F N V +++ LEV+ +D F T V+ W LVV DE H LKN KS+ A + + F LTGT++QN++ E + + + + G L F EY+ P+ +G+R A +R V++ +R + L + K +LRRTKE+ +G+L++GK +VFC+++ VQK +YR +L P+ ++L PC CG +CC + R ++W H + L+ C P CP+C LP + KLQ+++NH +E P + +Q + A L D D E+ G +SENF+ LS + CGKM+ L+ LL + K+LLFSYS LD+L+ +I++GY F RLDG T M R +L+ +N+ + VFLIST+AG G+NL SAN+V+++D +WNP+QD QA+DR++R GQ V V
Sbjct: 22 STDKGKKSSPVLILCPTSVIRNWENEFSEWANFSVAVYHGPN------RDLVLEKIEGQGLEVLITSFDTFRTRDKVLCDISWELVVVDEAHRLKNEKSKLYTACLGITTQKRFC-LTGTIMQNKIMELFNVFDWVVPGCLGDREHFREYYDEPLKHGQRLSAPERFVQVADKRKKHLVSVLKKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDIQILVNKDLPCSCGSPLTQVECC----------KKIEPRGIIWSYLHRENLDGC---PLCPFCLVLPCLVKLQQISNH-----LELIKPNPRDEIEKQK---------KDAELAAAVFDTDIELVGGSA---------------KSENFMGLSDSEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMNARQSLVDEFNKSPSKQ--VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQKRHVTV 478
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A446KT05_TRITD (Uncharacterized protein n=4 Tax=Pooideae TaxID=147368 RepID=A0A446KT05_TRITD) HSP 1 Score: 290 bits (741), Expect = 3.200e-86 Identity = 177/508 (34.84%), Postives = 268/508 (52.76%), Query Frame = 1
Query: 76 STGKGGK--PVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPK-LETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
ST KG K PVLI+CP+ + +W +W F N V +++ LEV+ +D F T V+ W LVV DE H LKN KS+ A + + F GLTGT++QN++ E + + + + G L F EY+ P+ +G+R A +R V++ +R + L + K +LRRTKE+ +G+L++GK +VFC+++ VQK +YR +L P+ ++L PC CG +CC + R ++W H + L+ C P CP+C LP + KLQ+++NH +E P + +Q + A L D D E+ G +SENF+ LS + CGKM+ L+ LL + K+LLFSYS LD+L+ +I++GY F RLDG T M R +L+ +N+ + VFLIST+AG G+NL SAN+V+++D +WNP+QD QA+DR++R GQ V V
Sbjct: 184 STDKGKKSSPVLILCPTSVIRNWENEFSEWANFSVAVYHGPN------RDLVLEKIEGQGLEVLITSFDTFRTRDKVLCDISWELVVVDEAHRLKNEKSKLYTACLGITTRKRF-GLTGTIMQNKIMELFNVFDWVVPGCLGDREHFREYYDEPLKHGQRLSAPERFVQVADKRKKHLVSVLKKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDIQILVNKDLPCSCGSPLTQVECC----------KKIEPRGIIWSYLHRENLDGC---PLCPFCLVLPCLVKLQQISNH-----LELIKPNPRDEIEKQK---------KDAELAAAVFDTDIELVGGSA---------------KSENFMGLSDSEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMNARQSLVDEFNKSPSKQ--VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQKRHVTV 640
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A2G5CVL9_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CVL9_AQUCA) HSP 1 Score: 293 bits (751), Expect = 6.500e-86 Identity = 185/511 (36.20%), Postives = 271/511 (53.03%), Query Frame = 1
Query: 67 VPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKL-ETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQ--GARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
V + GK G PVLIVCPS + +W KW F N + +L + S+E++ +D F ++A+ W +V+ DE H LKN K++ +A + + F GLTGT++QN++ E + L + + G L T F E++ P+ +G+R A +R VE+ +R Q L + + +LRRTKE+ +G+L+MGK VVFC L+ +QK +YR +L LPE + L PC CG +CC + ++WR H + E C SCP+C LP + KLQ+V+NH +E P + +Q A FA F L VGG +SE+F+ LS + CGKM+ L+ L++ + K+LLFSYS LD+L+ L+I++GY F RLDG T R AL+ +N + VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ V V
Sbjct: 175 VETNNGKKG-PVLIVCPSSVITNWENEFSKWSNFSVAVYHGPN------RDLILEKLKSHSIEMLITSFDTFRIQGTILAEVPWEIVIVDEAHRLKNEKAKLYEACLRIKTTKRF-GLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSSAPERFVEIADKRKQHLVNVLRRYLLRRTKEETIGHLMMGKEDNVVFCALSALQKRVYRRMLQLPEIQCLINKDLPCSCGSPLKQVECCR----------KIVPNGIIWRYLHRENPEGCD---SCPFCLVLPCLVKLQQVSNH-----LELIKPNPRDDMEKQKKDAEFASAVFGTDIEL----------VGGNA----------------QSESFMGLSDVEHCGKMRALEKLMQSWISHGDKILLFSYSVRMLDILEKLLIRKGYCFSRLDGSTPTSLRQALVDDFNTSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 631
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A6J1D950_MOMCH (switch 2 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D950_MOMCH) HSP 1 Score: 290 bits (741), Expect = 1.260e-84 Identity = 174/504 (34.52%), Postives = 273/504 (54.17%), Query Frame = 1
Query: 82 GKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYH-PKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
GK PVLIVCP+ + +W KW F +N +S+ +L+AG++E++ +D + + ++++ KW +++ DE H LKN K++ A + + F GLTGT++QN++ E + L +++ G L T F E++ P+ +G+R A +R V + +R Q L + K +LRRTK++ +G+L++GK VVFC ++ +QK +YR +L LP+ + L PC CG +CC K +V + ++W H E C SCP+C LP + KLQ+++NH L++ +P R+ A FA + F L VGG ++E+F+ LS CGKM+ L+ L + K+LLFSYS LD+L+ ++++GY+F RLDG T R L+ +N + VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ V V
Sbjct: 195 GKKKGPVLIVCPTSVIHNWENEFSKWANFSVAVYHGAN------RESIYDKLEAGTMEILITSFDTYRIHGGILSEIKWEILIVDEAHRLKNEKAKLYSACAGIKTLKRF-GLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPERFVRIADKRKQHLAAVLHKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQCLINKDLPCSCGSPLTQAECC---------KRTVPD-GIIWPYLHRDNPEGCE---SCPFCIVLPCLVKLQQISNHLELIKPNPRD-DPDKQRRD--AEFASMVFGSDINL----------VGGSA----------------QNESFMALSDVRHCGKMRALEKLFSSWATQGDKILLFSYSVRMLDILEKFLVRKGYSFSRLDGSTPTNLRQTLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVV 647
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A164ZHJ8_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164ZHJ8_DAUCS) HSP 1 Score: 288 bits (737), Expect = 3.090e-84 Identity = 177/500 (35.40%), Postives = 269/500 (53.80%), Query Frame = 1
Query: 94 KPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYH-PKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
+PVLI+CPS + +W KW F DV +G N+ + + +L+ +E++ +D F + DV+++ W +V+ DE H LKN KS+ QA + +G + GLTGT++QN+L E + L + + G L T F E++ P+ +G+R A +R V + R Q L + K +LRRTKE+ +G+L+MGK VVFC ++ VQK +Y+ +L +PE + L PC CG +CC + ++W H + C SCPYC LP + KLQ+++NH L++ +++ A FA + F + VGG R+E+F+ LS CGKM+ L+ L+ + K+LLFSYS LD+L+ +I++GYTF RLDG R +L+ +N + VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ V V
Sbjct: 184 RPVLIICPSSVIQNWENEFSKWASF---DVSIYHG-ANRDL--IMEKLEVHGVEILITSFDTFRIHGDVLSEIHWEIVIIDEAHRLKNDKSKLYQACLA-IGTKKRYGLTGTIMQNKLMELFNLFDWVVPGCLGTREHFREFYVEPLKHGQRSSAPERFVRIADARKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCAMSEVQKRVYQRMLQIPEIQSLINKDLPCSCGSPLKQVECC----------NRTVPNGIIWSYLHRDNPDGCD---SCPYCVVLPCLIKLQQISNHLELIKPNP---RDDPEKQKKDAEFASMIFGHDVDV----------VGGNT----------------RNESFMGLSEVKHCGKMRALEKLMLSWISQGDKILLFSYSVRMLDILEKFLIRKGYTFSRLDGSIPTGLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 632
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A1S4DX38_CUCME (switch 2 isoform X2 n=9 Tax=Benincaseae TaxID=1003877 RepID=A0A1S4DX38_CUCME) HSP 1 Score: 286 bits (733), Expect = 4.650e-84 Identity = 173/504 (34.33%), Postives = 269/504 (53.37%), Query Frame = 1
Query: 82 GKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYH-PKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
GK PVLIV P+ + +W KW F +N + +L+AG++EV+ +D + + ++++ KW +++ DE H LKN KS+ A + + F GLTGT++QN++ E + L +++ G L T F E+F P+ +G+R A +R + + R Q L + K +LRRTK++ +G+L++GK VVFC ++ +QK +YR +L LP+ + L PCGCG +CC K +V ++W H E C SCP+C LP + KLQ+++NH L++ + + + A FA + L VGG ++E+F+ LS CGKM+ L+ LL + K+LLFSYS LD+L+ ++++GY+F RLDG T R +L+ +N + VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ V V
Sbjct: 196 GKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGTN------RDLIYDKLEAGAIEVLITSFDTYRIHGGILSEVKWEILIIDEAHRLKNEKSKLYSACAGIKTLKRF-GLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFFDEPLKHGQRSTAPERFIRIADERKQHLAAVLRKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQCLINKDLPCGCGSPLTQAECC---------KRTVPN-GIIWPYLHRDNPEGCD---SCPFCIVLPCLVKLQQISNHLELIKPSP---KDDPEKQRRDAEFASAVYGSDIDL----------VGGSA----------------QNESFMALSDVRHCGKMRALEKLLTSWTSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGSTPTNMRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVV 648
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: UPI00129E1627 (switch 2 isoform X1 n=2 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E1627) HSP 1 Score: 288 bits (737), Expect = 5.580e-84 Identity = 176/498 (35.34%), Postives = 259/498 (52.01%), Query Frame = 1
Query: 103 LIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQ--GARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
LI+CP+ + +W L WG F N + +L A +E++ +D F V+ KF W +VV DE H LKN KSQ +A + ++ F GLTGT++QN++ E + L++ + G L T F EY+ P+ +G+R A +R V + R L + K +LRRTK++ +G+L+MGK VVFC ++ +QK +YR +LD P+ + L PC CG +CC + + ++W H ++ SCP+C LP + KLQ+++NH +E P + +Q A A F + L VGG +SENF+ LS + CGKM+ L+ L+ + R K+LLFSYS LD+L+ +I++GY F RLDG T M R L+ +N VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR +R GQ V V
Sbjct: 201 LIICPTSVIHNWEHELSNWGNFGVAVYHGIN------RDLILEKLGARGVEILLTSFDTFRIQYMVLCKFNWDIVVIDEAHRLKNEKSQLYKACLGIKTSKRF-GLTGTIMQNKIMELFNLLDWVAPGSLGTREHFREYYDEPLKHGQRLSAPERFVLIADERKNHLATVLQKYLLRRTKQETIGHLMMGKEDNVVFCAMSELQKRVYRRMLDQPDVQALIQKDVPCSCGSPLTRAECC----------HRTAPKGIIWSYLH--RDSPDGCDSCPFCLVLPCLIKLQQISNH-----LELIKPNPKDEIEKQRKDADLAAAVFGDDITL----------VGGNT----------------QSENFMGLSDVEHCGKMRALQRLMATWIREGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMSSRQPLVDEFNSSPCKQ--VFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRTFRYGQRRHVLV 646
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A7J6X0X6_THATH (Switch n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6X0X6_THATH) HSP 1 Score: 287 bits (734), Expect = 8.810e-84 Identity = 181/510 (35.49%), Postives = 265/510 (51.96%), Query Frame = 1
Query: 67 VPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQ--GARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
V + GK G PVLIVCPS + +W KW F N + +L + +E++ +D F ++A+ W +V+ DE H LKN K++ +A + + F GLTGT++QN++ E + L + + G L T F E++ P+ +G+R A R VE+ +R Q L + + +LRRTKE+ +G+L+MGK VVFC ++ +QK +YR +L LPE + L PC CG +CC + ++WR H E SCP+C LP + KLQ+V+NH +E P + +Q A FA F L VGG SE+F+ LS + CGKM+ L+ LL + K+LLFSYS L++L+ L+I++GY F RLDG T R +L+ +N + VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ V V
Sbjct: 173 VEIDDGKKG-PVLIVCPSSVITNWENEFSKWSNFSVAVYHGPN------RDLILDKLKSKGIEMLITSFDTFRIQGTILAEVPWEIVIVDEAHRLKNEKAKLYEACLGIKTTKRF-GLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSSAPDRFVEIADKRKQHLVNVLRRYLLRRTKEETIGHLMMGKEDNVVFCAMSALQKRVYRRMLQLPEIQCLINKDLPCSCGSPLKQVECCR----------RIVPNGIIWRYLH--RENPDGCDSCPFCLVLPCLLKLQQVSNH-----LELIKPNPKDDMEKQRKDAEFASAVFGTDIEL----------VGGNTP----------------SESFMGLSDVEHCGKMRALEKLLLTWISHGDKILLFSYSVRMLNILEKLLIRKGYCFSRLDGSTPTSLRQSLVDDFNTSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 629 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14969.3323.1 >prot_H-elongata_contig14969.3323.1 ID=prot_H-elongata_contig14969.3323.1|Name=mRNA_H-elongata_contig14969.3323.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=530bp LLSLLPGTKQDLKGIKERLKRKVPVSTGKGGKPVLIVCPSGFVDSWREHLback to top mRNA from alignment at H-elongata_contig14969:216..7765+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14969.3323.1 ID=mRNA_H-elongata_contig14969.3323.1|Name=mRNA_H-elongata_contig14969.3323.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7550bp|location=Sequence derived from alignment at H-elongata_contig14969:216..7765+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14969:216..7765+ >mRNA_H-elongata_contig14969.3323.1 ID=mRNA_H-elongata_contig14969.3323.1|Name=mRNA_H-elongata_contig14969.3323.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3180bp|location=Sequence derived from alignment at H-elongata_contig14969:216..7765+ (Himanthalia elongata Himel1 dioecious)back to top |