mRNA_H-elongata_contig14969.3323.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14969.3323.1
Unique NamemRNA_H-elongata_contig14969.3323.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 1.500e-168
Identity = 284/545 (52.11%), Postives = 366/545 (67.16%), Query Frame = 1
Query:    1 LLSLLP--GTKQDLKGIKERLKRKVPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGR-GNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNE-NSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVET-FAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGV----------DRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            LL+LL   GT++D   IK R   K  VS    GKPVLIVCP   + +W  HL+ WG+FE+  + S     G +S+Q VE+RL AG LEVV +G  +F  + + +++F WL  VFDE H  KNP + +++AV+ LV AEVF+GLTGTL+QN L E+W L+N +Q G +    +F  +F  PIL G+++GA + +V L   R+ E+G  RDK+VLRR K+ +LG+LL GK GTVVFC L  VQK +YRT+L LPE +LLA A+DPC CGR +  SG CCG+WP+DD+S+D V  RAV+WR++HP LE C   P CPYCC    + KLQK+ANHP LLQV+  + +  +A        FA VAF+E+AR++M   D   + GG        G              DRRL R ENFLQL RDD CGKM+TLKVLL RF+    KVLLFSYSTA LD+LQ L   +GYTFL+LDG T  ++R  +I R+ +++AI + VFLIST AGGTGLNL +A+KVILYDVNWNP+QD QAEDRAYRIGQ   VEV
Sbjct:  327 LLALLKKTGTRRDRMDIKRRKDCKGHVSVA--GKPVLIVCPRSVLPNWTGHLKTWGHFETACITSGGSTAGPESLQRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGVTRDKVVLRRVKD-ILGDLLKGKIGTVVFCNLTHVQKLVYRTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGENAHKMLDDIAFANVAFSEEARVIMA--DLPGQHGGGAVSGSSIGXXXXXXXXXXXXEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 865          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 7.420e-115
Identity = 226/527 (42.88%), Postives = 310/527 (58.82%), Query Frame = 1
Query:   19 GTKQDLKGIKERLKRKVPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRN--ENSGKCCGVWPRD-DSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            GT +D + ++ R K  +P S+   G P LIV P+  V  W + ++ WG+F +  + S      +    +   L AG  EVV   YDL     D + K ++  V+FDE H +K+  +  SQA   L    VF GLTGTLIQN++ E W+L+++I    +   S F E+F  PI   +   A   +  L  +RL+EL  IRDK ++RRTK++ LG++L GK+ TVVFC L+ VQ+E+Y+ +L LPE +LLA A +PC CGR+      +CC   P       D V  RAVL+R+ HP L  C     CP+CC LP + KLQK+ANHPCLLQ      E     R+Q  +FAEVAFT++AR +M         GG                L RS+ FL +S+  +CGKMK+L+ LL +F     KVL+FS+STA LD+L+  +  +GY + RLDG T  +ER A I  +N  D    FVFLIST+AGG GLNLH+A++V+LYDVNWNP+   QA+DRAYRIGQ  +V V
Sbjct:  510 GTGRDSEELRRRRKEGLPASST--GLPWLIVAPAAVVPEWIKQIKVWGHFAAYQLESG-----RDADDLMVALKAGRYEVVATSYDLLRACVDRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKRVF-GLTGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLGEKRLKELDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAKEPCNCGRSGRPTRARCCHKTPDSRGGGGDGVDPRAVLFRRLHPTLMECD---KCPFCCQLPAVSKLQKIANHPCLLQENIRDPEHK---RQQQRQFAEVAFTDRAREIM---------GG----------------LERSQKFLDVSKVGVCGKMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNS-DRAGVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKVAV 996          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A453B8D7_AEGTS (Uncharacterized protein n=2 Tax=Poaceae TaxID=4479 RepID=A0A453B8D7_AEGTS)

HSP 1 Score: 287 bits (734), Expect = 4.710e-87
Identity = 176/508 (34.65%), Postives = 267/508 (52.56%), Query Frame = 1
Query:   76 STGKGGK--PVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPK-LETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            ST KG K  PVLI+CP+  + +W     +W  F        N         V  +++   LEV+   +D F T   V+    W LVV DE H LKN KS+   A   +   + F  LTGT++QN++ E + + + +  G L     F EY+  P+ +G+R  A +R V++  +R + L  +  K +LRRTKE+ +G+L++GK   +VFC+++ VQK +YR +L  P+ ++L     PC CG      +CC            +  R ++W   H + L+ C   P CP+C  LP + KLQ+++NH     +E     P   + +Q          + A L     D D E+ G                  +SENF+ LS  + CGKM+ L+ LL  +     K+LLFSYS   LD+L+  +I++GY F RLDG T M  R +L+  +N+  +    VFLIST+AG  G+NL SAN+V+++D +WNP+QD QA+DR++R GQ   V V
Sbjct:   22 STDKGKKSSPVLILCPTSVIRNWENEFSEWANFSVAVYHGPN------RDLVLEKIEGQGLEVLITSFDTFRTRDKVLCDISWELVVVDEAHRLKNEKSKLYTACLGITTQKRFC-LTGTIMQNKIMELFNVFDWVVPGCLGDREHFREYYDEPLKHGQRLSAPERFVQVADKRKKHLVSVLKKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDIQILVNKDLPCSCGSPLTQVECC----------KKIEPRGIIWSYLHRENLDGC---PLCPFCLVLPCLVKLQQISNH-----LELIKPNPRDEIEKQK---------KDAELAAAVFDTDIELVGGSA---------------KSENFMGLSDSEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMNARQSLVDEFNKSPSKQ--VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQKRHVTV 478          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A446KT05_TRITD (Uncharacterized protein n=4 Tax=Pooideae TaxID=147368 RepID=A0A446KT05_TRITD)

HSP 1 Score: 290 bits (741), Expect = 3.200e-86
Identity = 177/508 (34.84%), Postives = 268/508 (52.76%), Query Frame = 1
Query:   76 STGKGGK--PVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPK-LETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            ST KG K  PVLI+CP+  + +W     +W  F        N         V  +++   LEV+   +D F T   V+    W LVV DE H LKN KS+   A   +   + F GLTGT++QN++ E + + + +  G L     F EY+  P+ +G+R  A +R V++  +R + L  +  K +LRRTKE+ +G+L++GK   +VFC+++ VQK +YR +L  P+ ++L     PC CG      +CC            +  R ++W   H + L+ C   P CP+C  LP + KLQ+++NH     +E     P   + +Q          + A L     D D E+ G                  +SENF+ LS  + CGKM+ L+ LL  +     K+LLFSYS   LD+L+  +I++GY F RLDG T M  R +L+  +N+  +    VFLIST+AG  G+NL SAN+V+++D +WNP+QD QA+DR++R GQ   V V
Sbjct:  184 STDKGKKSSPVLILCPTSVIRNWENEFSEWANFSVAVYHGPN------RDLVLEKIEGQGLEVLITSFDTFRTRDKVLCDISWELVVVDEAHRLKNEKSKLYTACLGITTRKRF-GLTGTIMQNKIMELFNVFDWVVPGCLGDREHFREYYDEPLKHGQRLSAPERFVQVADKRKKHLVSVLKKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDIQILVNKDLPCSCGSPLTQVECC----------KKIEPRGIIWSYLHRENLDGC---PLCPFCLVLPCLVKLQQISNH-----LELIKPNPRDEIEKQK---------KDAELAAAVFDTDIELVGGSA---------------KSENFMGLSDSEHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMNARQSLVDEFNKSPSKQ--VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQKRHVTV 640          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A2G5CVL9_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CVL9_AQUCA)

HSP 1 Score: 293 bits (751), Expect = 6.500e-86
Identity = 185/511 (36.20%), Postives = 271/511 (53.03%), Query Frame = 1
Query:   67 VPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKL-ETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQ--GARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            V  + GK G PVLIVCPS  + +W     KW  F        N         +  +L + S+E++   +D F     ++A+  W +V+ DE H LKN K++  +A   +   + F GLTGT++QN++ E + L + +  G L T   F E++  P+ +G+R  A +R VE+  +R Q L  +  + +LRRTKE+ +G+L+MGK   VVFC L+ +QK +YR +L LPE + L     PC CG      +CC            +    ++WR  H +  E C    SCP+C  LP + KLQ+V+NH     +E     P   + +Q   A FA   F     L          VGG                  +SE+F+ LS  + CGKM+ L+ L++ +     K+LLFSYS   LD+L+ L+I++GY F RLDG T    R AL+  +N   +    VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ   V V
Sbjct:  175 VETNNGKKG-PVLIVCPSSVITNWENEFSKWSNFSVAVYHGPN------RDLILEKLKSHSIEMLITSFDTFRIQGTILAEVPWEIVIVDEAHRLKNEKAKLYEACLRIKTTKRF-GLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSSAPERFVEIADKRKQHLVNVLRRYLLRRTKEETIGHLMMGKEDNVVFCALSALQKRVYRRMLQLPEIQCLINKDLPCSCGSPLKQVECCR----------KIVPNGIIWRYLHRENPEGCD---SCPFCLVLPCLVKLQQVSNH-----LELIKPNPRDDMEKQKKDAEFASAVFGTDIEL----------VGGNA----------------QSESFMGLSDVEHCGKMRALEKLMQSWISHGDKILLFSYSVRMLDILEKLLIRKGYCFSRLDGSTPTSLRQALVDDFNTSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 631          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A6J1D950_MOMCH (switch 2 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D950_MOMCH)

HSP 1 Score: 290 bits (741), Expect = 1.260e-84
Identity = 174/504 (34.52%), Postives = 273/504 (54.17%), Query Frame = 1
Query:   82 GKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYH-PKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            GK   PVLIVCP+  + +W     KW  F       +N       +S+  +L+AG++E++   +D +  +  ++++ KW +++ DE H LKN K++   A   +   + F GLTGT++QN++ E + L +++  G L T   F E++  P+ +G+R  A +R V +  +R Q L  +  K +LRRTK++ +G+L++GK   VVFC ++ +QK +YR +L LP+ + L     PC CG      +CC         K +V +  ++W   H    E C    SCP+C  LP + KLQ+++NH  L++      +P    R+  A FA + F     L          VGG                  ++E+F+ LS    CGKM+ L+ L   +     K+LLFSYS   LD+L+  ++++GY+F RLDG T    R  L+  +N   +    VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ   V V
Sbjct:  195 GKKKGPVLIVCPTSVIHNWENEFSKWANFSVAVYHGAN------RESIYDKLEAGTMEILITSFDTYRIHGGILSEIKWEILIVDEAHRLKNEKAKLYSACAGIKTLKRF-GLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPERFVRIADKRKQHLAAVLHKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQCLINKDLPCSCGSPLTQAECC---------KRTVPD-GIIWPYLHRDNPEGCE---SCPFCIVLPCLVKLQQISNHLELIKPNPRD-DPDKQRRD--AEFASMVFGSDINL----------VGGSA----------------QNESFMALSDVRHCGKMRALEKLFSSWATQGDKILLFSYSVRMLDILEKFLVRKGYSFSRLDGSTPTNLRQTLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVV 647          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A164ZHJ8_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164ZHJ8_DAUCS)

HSP 1 Score: 288 bits (737), Expect = 3.090e-84
Identity = 177/500 (35.40%), Postives = 269/500 (53.80%), Query Frame = 1
Query:   94 KPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYH-PKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            +PVLI+CPS  + +W     KW  F   DV   +G  N+ +  +  +L+   +E++   +D F  + DV+++  W +V+ DE H LKN KS+  QA  + +G +   GLTGT++QN+L E + L + +  G L T   F E++  P+ +G+R  A +R V +   R Q L  +  K +LRRTKE+ +G+L+MGK   VVFC ++ VQK +Y+ +L +PE + L     PC CG      +CC          +      ++W   H    + C    SCPYC  LP + KLQ+++NH  L++            +++ A FA + F     +          VGG                  R+E+F+ LS    CGKM+ L+ L+  +     K+LLFSYS   LD+L+  +I++GYTF RLDG      R +L+  +N   +    VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ   V V
Sbjct:  184 RPVLIICPSSVIQNWENEFSKWASF---DVSIYHG-ANRDL--IMEKLEVHGVEILITSFDTFRIHGDVLSEIHWEIVIIDEAHRLKNDKSKLYQACLA-IGTKKRYGLTGTIMQNKLMELFNLFDWVVPGCLGTREHFREFYVEPLKHGQRSSAPERFVRIADARKQHLVAVLRKYLLRRTKEETIGHLMMGKEDNVVFCAMSEVQKRVYQRMLQIPEIQSLINKDLPCSCGSPLKQVECC----------NRTVPNGIIWSYLHRDNPDGCD---SCPYCVVLPCLIKLQQISNHLELIKPNP---RDDPEKQKKDAEFASMIFGHDVDV----------VGGNT----------------RNESFMGLSEVKHCGKMRALEKLMLSWISQGDKILLFSYSVRMLDILEKFLIRKGYTFSRLDGSIPTGLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVIV 632          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A1S4DX38_CUCME (switch 2 isoform X2 n=9 Tax=Benincaseae TaxID=1003877 RepID=A0A1S4DX38_CUCME)

HSP 1 Score: 286 bits (733), Expect = 4.650e-84
Identity = 173/504 (34.33%), Postives = 269/504 (53.37%), Query Frame = 1
Query:   82 GKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYH-PKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            GK   PVLIV P+  + +W     KW  F       +N         +  +L+AG++EV+   +D +  +  ++++ KW +++ DE H LKN KS+   A   +   + F GLTGT++QN++ E + L +++  G L T   F E+F  P+ +G+R  A +R + +   R Q L  +  K +LRRTK++ +G+L++GK   VVFC ++ +QK +YR +L LP+ + L     PCGCG      +CC         K +V    ++W   H    E C    SCP+C  LP + KLQ+++NH  L++      +     + + A FA   +     L          VGG                  ++E+F+ LS    CGKM+ L+ LL  +     K+LLFSYS   LD+L+  ++++GY+F RLDG T    R +L+  +N   +    VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ   V V
Sbjct:  196 GKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGTN------RDLIYDKLEAGAIEVLITSFDTYRIHGGILSEVKWEILIIDEAHRLKNEKSKLYSACAGIKTLKRF-GLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFFDEPLKHGQRSTAPERFIRIADERKQHLAAVLRKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQCLINKDLPCGCGSPLTQAECC---------KRTVPN-GIIWPYLHRDNPEGCD---SCPFCIVLPCLVKLQQISNHLELIKPSP---KDDPEKQRRDAEFASAVYGSDIDL----------VGGSA----------------QNESFMALSDVRHCGKMRALEKLLTSWTSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGSTPTNMRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVV 648          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: UPI00129E1627 (switch 2 isoform X1 n=2 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E1627)

HSP 1 Score: 288 bits (737), Expect = 5.580e-84
Identity = 176/498 (35.34%), Postives = 259/498 (52.01%), Query Frame = 1
Query:  103 LIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQ--GARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            LI+CP+  + +W   L  WG F        N         +  +L A  +E++   +D F     V+ KF W +VV DE H LKN KSQ  +A   +  ++ F GLTGT++QN++ E + L++ +  G L T   F EY+  P+ +G+R  A +R V +   R   L  +  K +LRRTK++ +G+L+MGK   VVFC ++ +QK +YR +LD P+ + L     PC CG      +CC             + + ++W   H   ++     SCP+C  LP + KLQ+++NH     +E     P   + +Q   A  A   F +   L          VGG                  +SENF+ LS  + CGKM+ L+ L+  + R   K+LLFSYS   LD+L+  +I++GY F RLDG T M  R  L+  +N        VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR +R GQ   V V
Sbjct:  201 LIICPTSVIHNWEHELSNWGNFGVAVYHGIN------RDLILEKLGARGVEILLTSFDTFRIQYMVLCKFNWDIVVIDEAHRLKNEKSQLYKACLGIKTSKRF-GLTGTIMQNKIMELFNLLDWVAPGSLGTREHFREYYDEPLKHGQRLSAPERFVLIADERKNHLATVLQKYLLRRTKQETIGHLMMGKEDNVVFCAMSELQKRVYRRMLDQPDVQALIQKDVPCSCGSPLTRAECC----------HRTAPKGIIWSYLH--RDSPDGCDSCPFCLVLPCLIKLQQISNH-----LELIKPNPKDEIEKQRKDADLAAAVFGDDITL----------VGGNT----------------QSENFMGLSDVEHCGKMRALQRLMATWIREGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMSSRQPLVDEFNSSPCKQ--VFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRTFRYGQRRHVLV 646          
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Match: A0A7J6X0X6_THATH (Switch n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6X0X6_THATH)

HSP 1 Score: 287 bits (734), Expect = 8.810e-84
Identity = 181/510 (35.49%), Postives = 265/510 (51.96%), Query Frame = 1
Query:   67 VPVSTGKGGKPVLIVCPSGFVDSWREHLEKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDVIAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELAEFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQELGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPECRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKLETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQ--GARFAEVAFTEKARLMMTPRDQDEEVGGXXXXXXXRGESGVDRRLLRSENFLQLSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYTFLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKVILYDVNWNPSQDTQAEDRAYRIGQTGRVEV 1590
            V +  GK G PVLIVCPS  + +W     KW  F        N         +  +L +  +E++   +D F     ++A+  W +V+ DE H LKN K++  +A   +   + F GLTGT++QN++ E + L + +  G L T   F E++  P+ +G+R  A  R VE+  +R Q L  +  + +LRRTKE+ +G+L+MGK   VVFC ++ +QK +YR +L LPE + L     PC CG      +CC            +    ++WR  H   E      SCP+C  LP + KLQ+V+NH     +E     P   + +Q   A FA   F     L          VGG                   SE+F+ LS  + CGKM+ L+ LL  +     K+LLFSYS   L++L+ L+I++GY F RLDG T    R +L+  +N   +    VFLIST+AGG GLNL SAN+V+++D NWNP+QD QA+DR++R GQ   V V
Sbjct:  173 VEIDDGKKG-PVLIVCPSSVITNWENEFSKWSNFSVAVYHGPN------RDLILDKLKSKGIEMLITSFDTFRIQGTILAEVPWEIVIVDEAHRLKNEKAKLYEACLGIKTTKRF-GLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSSAPDRFVEIADKRKQHLVNVLRRYLLRRTKEETIGHLMMGKEDNVVFCAMSALQKRVYRRMLQLPEIQCLINKDLPCSCGSPLKQVECCR----------RIVPNGIIWRYLH--RENPDGCDSCPFCLVLPCLLKLQQVSNH-----LELIKPNPKDDMEKQRKDAEFASAVFGTDIEL----------VGGNTP----------------SESFMGLSDVEHCGKMRALEKLLLTWISHGDKILLFSYSVRMLNILEKLLIRKGYCFSRLDGSTPTSLRQSLVDDFNTSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 629          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14969.3323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIQ3_ECTSI1.500e-16852.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FX84_ECTSI7.420e-11542.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A453B8D7_AEGTS4.710e-8734.65Uncharacterized protein n=2 Tax=Poaceae TaxID=4479... [more]
A0A446KT05_TRITD3.200e-8634.84Uncharacterized protein n=4 Tax=Pooideae TaxID=147... [more]
A0A2G5CVL9_AQUCA6.500e-8636.20Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]
A0A6J1D950_MOMCH1.260e-8434.52switch 2 n=1 Tax=Momordica charantia TaxID=3673 Re... [more]
A0A164ZHJ8_DAUCS3.090e-8435.40Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A1S4DX38_CUCME4.650e-8434.33switch 2 isoform X2 n=9 Tax=Benincaseae TaxID=1003... [more]
UPI00129E16275.580e-8435.34switch 2 isoform X1 n=2 Tax=Nymphaea colorata TaxI... [more]
A0A7J6X0X6_THATH8.810e-8435.49Switch n=1 Tax=Thalictrum thalictroides TaxID=4696... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14969contigH-elongata_contig14969:216..7765 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score530.4
Seed ortholog evalue9.6e-148
Seed eggNOG ortholog2880.D7FIQ3
KEGG koko:K11130,ko:K20098
KEGG Pathwayko03008,map03008
KEGG ModuleM00425
EggNOG free text desc.histone H2A-H2B dimer displacement
EggNOG OGsCOG0553@1,KOG0387@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons13
Model size1590
Cds size1590
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929884.961347-CDS-H-elongata_contig14969:215..4341622929884.961347-CDS-H-elongata_contig14969:215..434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 216..434 +
1691679195.0718884-CDS-H-elongata_contig14969:215..4341691679195.0718884-CDS-H-elongata_contig14969:215..434Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 216..434 +
1622929884.9720635-CDS-H-elongata_contig14969:718..8701622929884.9720635-CDS-H-elongata_contig14969:718..870Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 719..870 +
1691679195.0822523-CDS-H-elongata_contig14969:718..8701691679195.0822523-CDS-H-elongata_contig14969:718..870Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 719..870 +
1622929884.9821687-CDS-H-elongata_contig14969:1166..13081622929884.9821687-CDS-H-elongata_contig14969:1166..1308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 1167..1308 +
1691679195.0910258-CDS-H-elongata_contig14969:1166..13081691679195.0910258-CDS-H-elongata_contig14969:1166..1308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 1167..1308 +
1622929884.9965806-CDS-H-elongata_contig14969:1631..17601622929884.9965806-CDS-H-elongata_contig14969:1631..1760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 1632..1760 +
1691679195.0998178-CDS-H-elongata_contig14969:1631..17601691679195.0998178-CDS-H-elongata_contig14969:1631..1760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 1632..1760 +
1622929885.0080838-CDS-H-elongata_contig14969:2250..22951622929885.0080838-CDS-H-elongata_contig14969:2250..2295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 2251..2295 +
1691679195.1094341-CDS-H-elongata_contig14969:2250..22951691679195.1094341-CDS-H-elongata_contig14969:2250..2295Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 2251..2295 +
1622929885.0200403-CDS-H-elongata_contig14969:2835..29151622929885.0200403-CDS-H-elongata_contig14969:2835..2915Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 2836..2915 +
1691679195.1182446-CDS-H-elongata_contig14969:2835..29151691679195.1182446-CDS-H-elongata_contig14969:2835..2915Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 2836..2915 +
1622929885.0382025-CDS-H-elongata_contig14969:3363..35141622929885.0382025-CDS-H-elongata_contig14969:3363..3514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 3364..3514 +
1691679195.1279314-CDS-H-elongata_contig14969:3363..35141691679195.1279314-CDS-H-elongata_contig14969:3363..3514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 3364..3514 +
1622929885.054584-CDS-H-elongata_contig14969:3890..39851622929885.054584-CDS-H-elongata_contig14969:3890..3985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 3891..3985 +
1691679195.13609-CDS-H-elongata_contig14969:3890..39851691679195.13609-CDS-H-elongata_contig14969:3890..3985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 3891..3985 +
1622929885.072286-CDS-H-elongata_contig14969:4322..45511622929885.072286-CDS-H-elongata_contig14969:4322..4551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 4323..4551 +
1691679195.1443434-CDS-H-elongata_contig14969:4322..45511691679195.1443434-CDS-H-elongata_contig14969:4322..4551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 4323..4551 +
1622929885.0868585-CDS-H-elongata_contig14969:5243..53241622929885.0868585-CDS-H-elongata_contig14969:5243..5324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 5244..5324 +
1691679195.152427-CDS-H-elongata_contig14969:5243..53241691679195.152427-CDS-H-elongata_contig14969:5243..5324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 5244..5324 +
1622929885.1101286-CDS-H-elongata_contig14969:6059..62331622929885.1101286-CDS-H-elongata_contig14969:6059..6233Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 6060..6233 +
1691679195.1613214-CDS-H-elongata_contig14969:6059..62331691679195.1613214-CDS-H-elongata_contig14969:6059..6233Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 6060..6233 +
1622929885.1254895-CDS-H-elongata_contig14969:6881..69051622929885.1254895-CDS-H-elongata_contig14969:6881..6905Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 6882..6905 +
1691679195.1713226-CDS-H-elongata_contig14969:6881..69051691679195.1713226-CDS-H-elongata_contig14969:6881..6905Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 6882..6905 +
1622929885.1407022-CDS-H-elongata_contig14969:7696..77651622929885.1407022-CDS-H-elongata_contig14969:7696..7765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 7697..7765 +
1691679195.1801782-CDS-H-elongata_contig14969:7696..77651691679195.1801782-CDS-H-elongata_contig14969:7696..7765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14969 7697..7765 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14969.3323.1prot_H-elongata_contig14969.3323.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14969 216..7765 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14969.3323.1

>prot_H-elongata_contig14969.3323.1 ID=prot_H-elongata_contig14969.3323.1|Name=mRNA_H-elongata_contig14969.3323.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=530bp
LLSLLPGTKQDLKGIKERLKRKVPVSTGKGGKPVLIVCPSGFVDSWREHL
EKWGYFESQDVRSSNGRGNKSMQSVEARLDAGSLEVVCIGYDLFTTNRDV
IAKFKWLLVVFDEMHVLKNPKSQRSQAVESLVGAEVFVGLTGTLIQNELA
EFWWLMNMIQNGVLKTDSEFMEYFGRPILYGKRKGARKREVELRSRRLQE
LGFIRDKMVLRRTKEQVLGNLLMGKTGTVVFCKLAPVQKEIYRTILDLPE
CRLLAVAADPCGCGRNENSGKCCGVWPRDDSSKDSVSERAVLWRKYHPKL
ETCGPRPSCPYCCFLPIMQKLQKVANHPCLLQVETFAWEPSAVLREQGAR
FAEVAFTEKARLMMTPRDQDEEVGGGGGWGHGRGESGVDRRLLRSENFLQ
LSRDDLCGKMKTLKVLLRRFRRPAQKVLLFSYSTATLDLLQVLMIKEGYT
FLRLDGKTRMEERGALIKRYNERDAIDSFVFLISTKAGGTGLNLHSANKV
ILYDVNWNPSQDTQAEDRAYRIGQTGRVEV
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mRNA from alignment at H-elongata_contig14969:216..7765+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14969.3323.1 ID=mRNA_H-elongata_contig14969.3323.1|Name=mRNA_H-elongata_contig14969.3323.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7550bp|location=Sequence derived from alignment at H-elongata_contig14969:216..7765+ (Himanthalia elongata Himel1 dioecious)
CTCCTCTCGCTCCTGCCAGGCACGAAGCAGGACCTGAAAGGCATCAAGGA GAGGCTCAAGCGGAAGGTTCCCGTCAGCACCGGCAAGGGCGGCAAGCCCG TGCTGATCGTATGCCCGTCAGGCTTCGTGGACAGCTGGCGGGAGCACCTG GAAAAGTGGGGCTATTTTGAAAGCCAGGACGTGCGATCGAGCAATGGCAG AGGCAATAAGTCGATGCAGGTAAGCATCCGCGGGCGAAGCACGCGGGCGA GGGTGACACTGAAATATCTGACGGTTACAACGTGCTCCTTTTAGGGTTCC TTTTAATTTTCTTCCGCGTGTCGATGGTGCGCGATGGTGCAGGCAGTTTC TCCGTTAGGTCGAGTGTTTTTGCGTGTGGGCGAGATAGAGAGAGAGAGAG GAAGAAGTATGTTTCGTCCGTCTCCGTGTCTGTGATATGCTGCCGAAAAC ATCTCAAGACTCAACCCCTTCACCCCTCCACCCATTGTTATTCCGTCACA AAGAGCGTCGAGGCTAGATTGGACGCCGGGTCACTTGAGGTGGTGTGTAT CGGTTACGACCTCTTTACCACTAACCGAGACGTCATAGCAAAATTCAAGT GGCTGCTCGTGGTGTTCGACGAGATGCACGTGCTCAAGAATCCAAAATCC CAAAGGTGCCGTTGCCACTGCGCTTTTGTCAGATGCGCAAGGAGAATCAT AAGTGTATACTAGCTCCCTAACCAGGAGAGGGAGTGGCGGAGTGCGCGGA TAGCCATGATGTAGGAACAAGCAAGTAAATTTTTAAGTCGCCTTTCAACG CGCCATTGGCGTGGTATTTGCAATGCACTGTCTCACTCCCAAGCGCGTAG CGGACGAATCATCAGCTGTTGTTGCCTCTGCCCAGACTCTGCTGTAGTCC TCTTGGTCGCTATCGGCCCTCTCACGGAACTGTTTTTTCTCAACACGTCA GATCTCAGGCGGTGGAGAGTCTCGTGGGGGCGGAGGTCTTCGTCGGCCTG ACGGGAACCCTGATCCAGAACGAGCTGGCGGAGTTCTGGTGGCTCATGAA CATGATTCAGAACGGCGTCCTCAAGACGGACTCCGAATTCATGGTGATTT TCTTTTATCGAAAGAGGCATTTCGGCTTGATATAGCCCCTTTCTTGAAAA AGCCGTGTCAGTGCGCGTCCGGGCTACCTTTTGCGAAGATCTCGCTTTCT TGGTTCTCACAGATGCGATGCGGTCGAGTCCTCATGGACCCGTTATGCGG TCAAGCACAGATGCCATGCGGCCGAGTCTTCATGGACCCCGTTGCCTAGC GCTCCTAACGCTCCCGCAGCCCTGCTGCTTTTTCCATCGCCCGTTCTGAC TCAAAAATGAAAATGGAATTTCAATACGTAGCTCCCCCCCCCACCCCACC CCACCTACACACAAAGGAATACTTTGGTAGGCCAATCCTCTACGGCAAGA GGAAAGGAGCGAGAAAGCGCGAGGTTGAACTGAGGTCCAGAAGGCTGCAA GAGCTCGGATTCATCCGCGACAAAATGGTCCTGAGGCGTACCAAGGTGCC CGCGCGAAAGTCGTTTATTTCTCTCAGACGTCATGGGACAATCGGACGTT GCCGTGCTCAAATGGTGTTCCACAGGAGTAATTAATCCGTGCGTGATATC CTCGCGGGTTCCGAAGTGATGGGTACCCTTTAAGGAGTTGCGCTGTGAGA AAAAGGGCGTTCTGTGAAAGAAGAGTGAGAAGACGGCCGCACGGTAAATA TTACATTGTTCGAAGCAATTTCCCGAAAATCCGCGCCACTCCCACACAGA CCCATCAGAGCGCTACGAAAGCTCTGCGGGCTGTCGTCGTCGTTTGGCAG CGGCGCCATCCCAGTGCCAGTCACGCAGCACGCAGGCGATCCCGATCAAC GTTTTCTACCGAATGCGGAAAAACATTTGTGAGCTATCTTTTCACTCACG TGTAGCTCTTAGCTGCAGCATTACGCGAGATCTGCATTTACTTAGCTGCA GCATACGGCTCTTATGGTCTCGCTTGGCTCGGCAGGAACAAGTGCTGGGA AATCTTCTCATGGGAAAGACGGGCACGGTGGTGAGTGACCCCGCTGGGGC TAGCGCCGTGGATACGGACACGTTTCTCTTCAGACTGGCCCAGCGCTCAC GATGTAAAGCATGCGTTGGGTTCTTTTTGGTGGGTCTTGCGCGAGACGGC GGGTTTCGCTTAACCATGAAGGCGTTCGTTTACAGAACTAGTCTTGAATT CATCGCCGGGTTCTCAGGGGTGGATTGACCGCCCATCCGATCTTTCCCCA ACGCCTCCTTGCAAGCGAGGATCATATATCTTACTGTATGCATATATGTT GGCATGCTCGTGCCGAGAAGGTGGCTATCCTCTGCAAAATTCTCCTGCAT ATCACTCCCCCCCGCCTTGAACCTACACGCGGTTTTTCGGCGGGTCTTGA ATTGTTGTCATAAAGATACGCTGAACGTTCGGGCGCTCTGCTAAAAGATT GCTGTCTCCGACGTGTCGACAGACAAAAAAAAGTGATCAGGAGCAACAGT GCCTGTTACTCCTCGGCTTCGACCGGCCCCATCCTTGTTTCGCGGCTTTC GTTGCGGTCGTCACAAGCAGGTTTTCTGCAAGCTCGCTCCGGTGCAGAAG GAGATCTACCGGACGATTCTCGACCTGCCTGAGTGTAGGCTACTCGCCGT GTGAGTTCCGCCCATTGCTTGGAGGCGGCGCCGCTGTTTCCCCCTCGGTC GCCGCGACGATCGACGTCGTCCTGCTTCCACCCTCTCTCATAGACGCTTT ATATGTATATATATTTATATATTTATTTTTCTAGAAAAATGCCTATACTA CCGGCGGTGGCTCTCAGTTTTTTCTAATTATTTTTTACCGCTTAATCTTT CCGGAGACACGTTTTCTAAAACTTTGTCGATATTCCTTCACGTGAAACGA TGTGGTCGATGGTCGACCCCCGACACATATACACACATAAACACAAGGCA CACATTTCATAAGTAACATCTCGCAGCCCCTATATATATATATATGTTTC ACACACAGCACGCCGGCGCGATGCATCACGGGCGGTATTTGATATTGAGA ACGATTCGCTGCACAACCCATTCCCACAACAACGCCCCCGAGGAACAGGG CCGCCGATCCCTGCGGCTGCGGCCGAAACGAGAACTCCGGAAAGTGCTGC GGCGTTTGGCCCCGCGATGACAGCTCGAAGGACTCGGTGTCCGAGCGGGC CGTCTTGTGGAGGAAGTACCACCCCAAGCTCGAGACATGCGGCCCCAGGG TGCGTGTTTCCCAGTGCTTCCATCCCGCGTTATTTTAGGTTCTGACCGAG CTGCGCATCCCTGGCGGGACACCACCGTATATTCTACCCCGTGGTACATA TTTTATCAGTCGTCGTGGCGACACACTTCGGTAGTTGTTTCGAAGACATA AGGTAGCGATTTTCTTGAGATTTGTGTATCTCGCCGCTTTCGTTGAGAGA GAGCGGGGCGTCGTCTTGTGTCGCTTCGCGTCACCCCCTCCCCTGCTTGC TCCGATCAGCAGGGTCTGAGAGGAAGGCTTCGCTGACCCCGTTTGCCTTA GCGTGATGTCACCCTTTTGTTTCCTCTCCTCGTTCCTTCCCTCGTGCGTG ATGTGTGGTGTCTCGTCCCGAGAAGCCCTCGTGCCCGTACTGCTGCTTCC TCCCGATCATGCAAAAGCTTCAGAAGGTGGCGAACCATCCTTGCTTGCTC CAGGTAGAAACCTTCGCATGGTCATGCTCTTGTTTGTGTGTTATGCTCTT GCTTATCCGTAACAGTATGCGTGGTAATATGTGTATTTTGTGTCCCCGTC TCTACTTGCATGTCTGCCTGTCAGATCGTTTTGTGTAAGTTTGTTACCAT CGTTCAGCTTGGTGATAACATGTCCAGTCCCCATTTTTGGCCCGACTGCG CATAGTTTGCACGGGGTGGCATCGTAACGCCGCTCCTGAGAGTGTACTCC AGTTAGCTAGCCGACTCGTATGGGGATCCGAGGTACAACACTCCCGGTGC AACATTCACGCCGTGCCGAACCGGACCGTGCTTCGGCTGAAAGCAGGTGG ACACGAGGGAGCCCAGCGCCGTGCTGCGGGAGCAGGGCGCACGCTTCGCG GAAGTCGCCTTCACCGAGAAAGCCCGGTTAATGATGACACCCCGCGATCA GGACGAAGAAGTCGGGGGAGGGGGTGGCTGGGGGCACGGGCGTGGAGAGA GCGGTGTTGACCGGAGGCTGCTACGTTCTGAGAACTTTCTTCAGCTGAGC CGCGACGACCTATGTGGCAAGATGAAGACTCTCAAGGTGTACATATTTGC TGCATATGAATTAAAAGTGTATCATGTGTATATTTAGACCTGCCCTGTGA ATTTCGTAAAATGTTGTGTTATCAGGTGTACCATGCGACTTGAGTTACGT AAAATTATCAACATCCTAACCTGAAATAAACATCGCTTTGGAAATTAATG AATTTTCTGCATGCTACCGCCCCAACAACAGCTAACAAACAACAAAAGGG GCCCCCTTGTGATCTGACCATTTTGCCACACGATGAAAGGATGCCAAAAC ATGCGTGCTTACGTCAGCCAGGCGATCTTTTCTCGGAACGAGCTCTGCTT CCGCACAAAAAGATATTTAGGCTCTGCTGTCGAGTCCTCGCTAGAGTACT TCAAACAACCATATAGACGTACGGAGTTCCGCATATAGTGGGAAGAGGGG AAGGGAAGGGGAGGGGCGAGGTTTGGTCTCTCGATTGTAAATAGATCCCT TTAAGGCATCGTGGCGGTGGTTTTCTCTTAAGGATTGCAACGAGCTGACT TCCAAGAGAAGAATGAAAAAAATACAAGTAATATACATAAATGGCTAGCG GACCTTACTTGGCGGCTATTTATCCTCGCGCGACTGCTACCGTGGCCGCA ACTGCTCTTGAATGCTATATTTATTTTGCCGATGTTATTTGGTGTGCTAC TGATTTATATTATTTTGACTGTGCTCAGGTGCTGCTGAGGCGCTTCCGCC GCCCCGCCCAGAAGGTGCTCCTGTTCAGCTACAGTACCGCTACGCTCGAC CTCCTGCAGGTGTGGGACGCCAGAGCGCCCTTGCCATTCCCAATAACGCC CTCCATATGTTTTTAAATGTCATTCGTTTCCTCCTCTCACGTACACATGC GTAACATGTTGCGTGCCACAGCGGTGGCCTTTCGTAAAAGAAAAGCACAC AAACTATATGGAATAATTAGACATACCGTAGTGTCTAGGGGCTAGCATGT TAGGAATAATGTTACTATTATTACTATTATTATTATCATTACTAATATTA TTATTATTATTACTATTATTATTATTATTATTACTATTATTATTATTATT ATTATTATTACTAATATTATTATTATTATTATTATTATTACCATAATTAG TTACGCCACAAGGCAAGTGGCATTTCGCTTTTTCGTGCGTGACGTATTTC GTATTCTGCATATCATATCCTGTACCCGTACAAGTTCGTGTAACGCGACA TGTTACGTGTTTTCGATCACATGCATTCATTTTTTCCGCCTTGTTCATTA ACAGCACCCACTCTCCTCGATCACACACTCATCGGCAGTCAGGCAGAGAG GCGAGGACAGGCTAGGAATCGCTCGGTCCTAAACTTCACAGGCGGCGCAT GCCTAACTACACGGCATAAGGCTAGTTTTCTTTCCATCTCTCCCTCCCCC TCCCCCTCCCCATCGTGGTCGTAACGCAACCCCTAGAAATCGACAATTTT TTCGCCCGCCCGCCCGCCCGCCCGCGGCGCGCGTTGGCACGCAGGTACTG ATGATTAAAGAGGGCTACACGTTCCTCCGCCTCGACGGGAAGACTAGGAT GGAGGAGCGTGGGGCGCTGATCAAGCGTTACAACGAGAGGGACGCGATCG ACAGCTTCGTGTTCCTCATCAGCACCAAGGCGGGAGGGACGGGGCTCAAC TTGCACTCCGCGAACAAGGTGGCGCTGTTAGAGGGAGAGGAAAAGGAAAA CGGACAGGCAGACATGAATGGTTTAACGAGAAAGAACTGCATAAAGACTG CAATCTGCTTTCTCTTTTCTTGATGTCCGCTCGCGCTCTCAGAGCAACAT AGTAGTAGTAATAATAATAGTAATAGTATTAGCAGTAGTAGTAGTAGTGT TTGTTATATTCCAGCGTGTCGCGCGCGTTTTGAACCTTGCTTTGATTTTC TCTGTTGTCTTTTGAGCGTGCGAGCGCCAGCAAGCATATCCCCGCGCGAG TTACCCGGCCGGAAAAAGGGCCGTAGAGTAGAGCATGCTTCTCGAATATT TTATGAAAGAGAGAGAAAAAAACATAAGAGAGGGGTCTCGCCCTATCTCC TCTTTCTTTCTAATATTATTATTAGTATTTCCTCCTCCTTTCCGGTCTTT CCCCCTCCTTTCCTCTATCAACGCCGTAAACGTGGCCCGCGCGTGCGTCT GTGCTTGTGCTTGCCCTCATAGGATAACGGCGGTCGCAATATTTTATTCT TCTCTCTATATACTTCGTATATATATATATATATATTGCCGCTCTTTCTT GTTCCTATCGTCTTCGTATAATTTCTCCGGTTGTCCGGGCCGGTTCTTCG GTCGAGGACACGACAGGTTATCTTGTACGACGTCAACTGGGTGAGAAGTT ATTTTGGACTCGAGTATATATATACCGTATATAATACCGTCCATCTCTGT GGTGTTTTTGTCTTTGGTACGTGTTTTCGAAGTCGCTCTCCTCTTGTTCG ACTCGATCATAGCAACGCGCTATTGTCGTACAGGGTGAGGAATTCCAGGA AGATGATAAAGTGGCGTGTGTGTGTGTCCCTCCCTCACCCCCACCCCGCG CCATGTGGCAAGCGATCGCGGCCTGAGGATGGCCTCAACACTCGCCCCCC GAAGATGCGGCGGTAGCAGCAGCGGGTACTATAGATACTCTACAAAGGCG CGGCGGGCGGTGTTGATTTTCCTTATGCGCACTCCTCCCCCCCCCATCCA CGATCTAAATTTCCACCCCCCGCGCATGCACGAAAATCGATTATGCCGCT ACCTATACGTCTTTTTGTTTGAAAGCGTGACCCTGCCCTGGTATGTATGT CTGTCTTTCTCTACGCTGTTGTTGTGTTGTTGGTCTCACTTTTAACAGAA GGATCAACCGGATTTGGTTGCCTTCTGCTCGTGGTCAGCTGAACAGGAAA AATAATTTTCCCTTGTCCCCGTTCGCGCCTGAAAATTTGGTCTCTCGCGA GACGGGTTCAGCACTCCCGTCCCGCGTCGCGAAAATGAACAAACAGCGGA ATGATATATAGAAGGAATGTTTCGAGTACAGTACAGTAGATGGATTGTTA CCCTCACCGTCCGTGCTTCTTGTTCCTTCGAAGTACCCTGAAGTAACCCA CCCCACGTTCTCTTTCTCAATCTTTCCTCAGAACCCGTCCCAGGACACTC AGGCAGAGGACAGGGCGTATCGCATCGGACAGACGGGCAGGGTAGAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig14969:216..7765+

>mRNA_H-elongata_contig14969.3323.1 ID=mRNA_H-elongata_contig14969.3323.1|Name=mRNA_H-elongata_contig14969.3323.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3180bp|location=Sequence derived from alignment at H-elongata_contig14969:216..7765+ (Himanthalia elongata Himel1 dioecious)
CTCCTCTCGCTCCTGCCAGGCACGAAGCAGGACCTGAAAGGCATCAAGGA
GAGGCTCAAGCGGAAGGTTCCCGTCAGCACCGGCAAGGGCGGCAAGCCCG
TGCTGATCGTATGCCCGTCAGGCTTCGTGGACAGCTGGCGGGAGCACCTG
GAAAAGTGGGGCTATTTTGAAAGCCAGGACGTGCGATCGAGCAATGGCAG
AGGCAATAAGTCGATGCAGCTCCTCTCGCTCCTGCCAGGCACGAAGCAGG
ACCTGAAAGGCATCAAGGAGAGGCTCAAGCGGAAGGTTCCCGTCAGCACC
GGCAAGGGCGGCAAGCCCGTGCTGATCGTATGCCCGTCAGGCTTCGTGGA
CAGCTGGCGGGAGCACCTGGAAAAGTGGGGCTATTTTGAAAGCCAGGACG
TGCGATCGAGCAATGGCAGAGGCAATAAGTCGATGCAGAGCGTCGAGGCT
AGATTGGACGCCGGGTCACTTGAGGTGGTGTGTATCGGTTACGACCTCTT
TACCACTAACCGAGACGTCATAGCAAAATTCAAGTGGCTGCTCGTGGTGT
TCGACGAGATGCACGTGCTCAAGAATCCAAAATCCCAAAGAGCGTCGAGG
CTAGATTGGACGCCGGGTCACTTGAGGTGGTGTGTATCGGTTACGACCTC
TTTACCACTAACCGAGACGTCATAGCAAAATTCAAGTGGCTGCTCGTGGT
GTTCGACGAGATGCACGTGCTCAAGAATCCAAAATCCCAAAGATCTCAGG
CGGTGGAGAGTCTCGTGGGGGCGGAGGTCTTCGTCGGCCTGACGGGAACC
CTGATCCAGAACGAGCTGGCGGAGTTCTGGTGGCTCATGAACATGATTCA
GAACGGCGTCCTCAAGACGGACTCCGAATTCATGATCTCAGGCGGTGGAG
AGTCTCGTGGGGGCGGAGGTCTTCGTCGGCCTGACGGGAACCCTGATCCA
GAACGAGCTGGCGGAGTTCTGGTGGCTCATGAACATGATTCAGAACGGCG
TCCTCAAGACGGACTCCGAATTCATGGAATACTTTGGTAGGCCAATCCTC
TACGGCAAGAGGAAAGGAGCGAGAAAGCGCGAGGTTGAACTGAGGTCCAG
AAGGCTGCAAGAGCTCGGATTCATCCGCGACAAAATGGTCCTGAGGCGTA
CCAAGGAATACTTTGGTAGGCCAATCCTCTACGGCAAGAGGAAAGGAGCG
AGAAAGCGCGAGGTTGAACTGAGGTCCAGAAGGCTGCAAGAGCTCGGATT
CATCCGCGACAAAATGGTCCTGAGGCGTACCAAGGAACAAGTGCTGGGAA
ATCTTCTCATGGGAAAGACGGGCACGGTGGAACAAGTGCTGGGAAATCTT
CTCATGGGAAAGACGGGCACGGTGGTTTTCTGCAAGCTCGCTCCGGTGCA
GAAGGAGATCTACCGGACGATTCTCGACCTGCCTGAGTGTAGGCTACTCG
CCGTGTTTTCTGCAAGCTCGCTCCGGTGCAGAAGGAGATCTACCGGACGA
TTCTCGACCTGCCTGAGTGTAGGCTACTCGCCGTGGCCGCCGATCCCTGC
GGCTGCGGCCGAAACGAGAACTCCGGAAAGTGCTGCGGCGTTTGGCCCCG
CGATGACAGCTCGAAGGACTCGGTGTCCGAGCGGGCCGTCTTGTGGAGGA
AGTACCACCCCAAGCTCGAGACATGCGGCCCCAGGGGCCGCCGATCCCTG
CGGCTGCGGCCGAAACGAGAACTCCGGAAAGTGCTGCGGCGTTTGGCCCC
GCGATGACAGCTCGAAGGACTCGGTGTCCGAGCGGGCCGTCTTGTGGAGG
AAGTACCACCCCAAGCTCGAGACATGCGGCCCCAGGCCCTCGTGCCCGTA
CTGCTGCTTCCTCCCGATCATGCAAAAGCTTCAGAAGGTGGCGAACCATC
CTTGCTTGCTCCAGGTAGAAACCTTCGCATGCCCTCGTGCCCGTACTGCT
GCTTCCTCCCGATCATGCAAAAGCTTCAGAAGGTGGCGAACCATCCTTGC
TTGCTCCAGGTAGAAACCTTCGCATGGGAGCCCAGCGCCGTGCTGCGGGA
GCAGGGCGCACGCTTCGCGGAAGTCGCCTTCACCGAGAAAGCCCGGTTAA
TGATGACACCCCGCGATCAGGACGAAGAAGTCGGGGGAGGGGGTGGCTGG
GGGCACGGGCGTGGAGAGAGCGGTGTTGACCGGAGGCTGCTACGTTCTGA
GAACTTTCTTCAGCTGAGCCGCGACGACCTATGTGGCAAGATGAAGACTC
TCAAGGGAGCCCAGCGCCGTGCTGCGGGAGCAGGGCGCACGCTTCGCGGA
AGTCGCCTTCACCGAGAAAGCCCGGTTAATGATGACACCCCGCGATCAGG
ACGAAGAAGTCGGGGGAGGGGGTGGCTGGGGGCACGGGCGTGGAGAGAGC
GGTGTTGACCGGAGGCTGCTACGTTCTGAGAACTTTCTTCAGCTGAGCCG
CGACGACCTATGTGGCAAGATGAAGACTCTCAAGGTGCTGCTGAGGCGCT
TCCGCCGCCCCGCCCAGAAGGTGCTCCTGTTCAGCTACAGTACCGCTACG
CTCGACCTCCTGCAGGTGCTGCTGAGGCGCTTCCGCCGCCCCGCCCAGAA
GGTGCTCCTGTTCAGCTACAGTACCGCTACGCTCGACCTCCTGCAGGTAC
TGATGATTAAAGAGGGCTACACGTTCCTCCGCCTCGACGGGAAGACTAGG
ATGGAGGAGCGTGGGGCGCTGATCAAGCGTTACAACGAGAGGGACGCGAT
CGACAGCTTCGTGTTCCTCATCAGCACCAAGGCGGGAGGGACGGGGCTCA
ACTTGCACTCCGCGAACAAGGTACTGATGATTAAAGAGGGCTACACGTTC
CTCCGCCTCGACGGGAAGACTAGGATGGAGGAGCGTGGGGCGCTGATCAA
GCGTTACAACGAGAGGGACGCGATCGACAGCTTCGTGTTCCTCATCAGCA
CCAAGGCGGGAGGGACGGGGCTCAACTTGCACTCCGCGAACAAGGTTATC
TTGTACGACGTCAACTGGGTTATCTTGTACGACGTCAACTGGAACCCGTC
CCAGGACACTCAGGCAGAGGACAGGGCGTATCGCATCGGACAGACGGGCA
GGGTAGAGGTGAACCCGTCCCAGGACACTCAGGCAGAGGACAGGGCGTAT
CGCATCGGACAGACGGGCAGGGTAGAGGTG
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