mRNA_H-elongata_contig149679.3321.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: D7FNC8_ECTSI (Enoyl-ACP reductase enoyl-ACP reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNC8_ECTSI) HSP 1 Score: 167 bits (422), Expect = 2.850e-48 Identity = 86/112 (76.79%), Postives = 97/112 (86.61%), Query Frame = 1
Query: 22 QAVANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFSAVV 357
+A ANYN+MGPAK+SLESCARALA ELGG+ S GPGG+RVNCLSPGPVRTMAARGI GFD MR+EAA +AP+GR A +EIA ATFLAS L S+VTGQT+YADCGFSAVV
Sbjct: 255 RAAANYNVMGPAKASLESCARALAAELGGDTTSQGPGGVRVNCLSPGPVRTMAARGIAGFDQMRREAAGRAPLGRAAEIDEIAAAATFLASPLSSAVTGQTLYADCGFSAVV 366
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: A0A835YLZ8_9STRA (Enoyl-reductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLZ8_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.100e-35 Identity = 69/110 (62.73%), Postives = 83/110 (75.45%), Query Frame = 1
Query: 28 VANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFSAVV 357
V NYNIMGPAK+SLESCARALA ELG +RVNCLSPGPVRT+AA+GI GF M++ A+ +APM R A+ EEI ATFLAS+ S++TGQ +Y DCGFSAV+
Sbjct: 49 VPNYNIMGPAKASLESCARALAYELGEK-------NVRVNCLSPGPVRTLAAKGIKGFSEMQRMASERAPMQRTANMEEITSSATFLASNYASAITGQIIYVDCGFSAVI 151
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: W2RHY9_PHYPN (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2RHY9_PHYPN) HSP 1 Score: 109 bits (272), Expect = 8.720e-27 Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 28 VANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFSAV 354
V NYN+MGPAK++LE+ AR LA ELG P GIRVNCLSPGP+ T++ARGI G MR+ A AP+ R +S+ ++ VATFL+S L +++TGQT+Y D G A+
Sbjct: 168 VPNYNVMGPAKAALEATARQLAYELG-------PEGIRVNCLSPGPMNTVSARGIPGISKMRKYAENHAPLRRNSSNGDVGSVATFLSSDLAAAITGQTIYVDGGLGAM 269
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: A0A0P1A8U3_PLAHL (Short-chain dehydrogenase reductase sdr n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8U3_PLAHL) HSP 1 Score: 107 bits (266), Expect = 5.990e-26 Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 28 VANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFSAV 354
V NYN+MGPAK++LE+ AR LA ELG P GIRVNCLSPGP+ T++ARGI G MR A AP+ R +S+ ++ VA FL+S L ++V+GQT++ D G SA+
Sbjct: 163 VPNYNVMGPAKAALEATARQLAYELG-------PDGIRVNCLSPGPINTVSARGIPGISKMRTYAETHAPLRRNSSNSDVGSVAAFLSSDLAAAVSGQTIFVDGGLSAM 264
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: A0A4Y8PHD6_9BACT (Enoyl-[acyl-carrier-protein] reductase [NADH] n=2 Tax=unclassified Methylacidiphilum TaxID=2628272 RepID=A0A4Y8PHD6_9BACT) HSP 1 Score: 106 bits (264), Expect = 9.280e-26 Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 28 VANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFS 348
++NY IMGPAK++LES R LA ELG + GIRVN LSPGP+ T+AARGITGF +E A K+P+G+ ++A A FLA ++TGQT+Y DCG+S
Sbjct: 156 ISNYKIMGPAKAALESAVRYLAYELGKD-------GIRVNALSPGPINTLAARGITGFTKFLKECASKSPLGKNTEASDVASAALFLAKDESRAITGQTIYIDCGYS 255
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: D0MUJ3_PHYIT (Enoyl-[acyl-carrier-protein] reductase [NADH], putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MUJ3_PHYIT) HSP 1 Score: 105 bits (263), Expect = 1.630e-25 Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 28 VANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFSAV 354
V NYN+MGPAK++LE+ AR LA ELG P GIRVNCLSPGP+ T++ARGI G MR+ A AP+ R +S ++ VA FL+S L ++VTGQT + D G SA+
Sbjct: 165 VPNYNVMGPAKAALEATARQLAYELG-------PDGIRVNCLSPGPMNTVSARGIPGISKMRRYAENHAPLRRNSSSGDVGSVAAFLSSDLAAAVTGQTFHVDGGLSAM 266
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: B3DWM4_METI4 (Enoyl-[acyl-carrier-protein] reductase [NADH] n=4 Tax=Methylacidiphilum TaxID=511745 RepID=B3DWM4_METI4) HSP 1 Score: 105 bits (261), Expect = 3.560e-25 Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 28 VANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFS 348
++NY IMGPAK++LES R LA ELG + GIRVN LSPGP+ T+AARGI+GF +E A K+P+GR ++A A FLA+ ++TGQT+Y DCG+S
Sbjct: 172 ISNYKIMGPAKAALESTVRYLAYELGKD-------GIRVNALSPGPINTLAARGISGFTKFLKECASKSPLGRNTETTDVASAALFLATDESRAITGQTLYIDCGYS 271
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: A0A2W6Y1T1_9RHOO (Enoyl-[acyl-carrier-protein] reductase [NADH] n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2W6Y1T1_9RHOO) HSP 1 Score: 104 bits (259), Expect = 4.920e-25 Identity = 57/111 (51.35%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 22 QAVANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFSAV 354
+AV NY +MGP K++LES R +A ELG P GIRV+ +SPGP+ T AA GI FD + A RK+P+GR + EEIAG+ TFL S S +TGQT+Y D G+ AV
Sbjct: 153 EAVPNYGLMGPVKAALESMVRYMAMELG-------PAGIRVHAVSPGPILTRAASGIASFDELMDSAIRKSPLGRLVTLEEIAGLTTFLCSDAASGMTGQTLYVDAGYHAV 256
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: A0A8K1FCD2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCD2_PYTOL) HSP 1 Score: 104 bits (259), Expect = 6.910e-25 Identity = 59/107 (55.14%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 28 VANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFS 348
V NYNIMGPAK++LE+ R LA ELG GIRVNCLSPGP+ T++ARGI G MR+ A AP+ R AS EE+ +A FLAS+ S++TGQT+Y D G S
Sbjct: 164 VPNYNIMGPAKAALEATTRQLAFELGVE-------GIRVNCLSPGPMNTVSARGIPGISKMRKYAEEHAPLHRNASGEEVGELAAFLASNSASAITGQTLYVDGGLS 263
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Match: A0A7W8I6A5_9DEIO (Enoyl-[acyl-carrier-protein] reductase [NADH] n=4 Tax=Deinococcus TaxID=1298 RepID=A0A7W8I6A5_9DEIO) HSP 1 Score: 103 bits (257), Expect = 1.060e-24 Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 22 QAVANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCLSPGPVRTMAARGITGFDAMRQEAARKAPMGRGASDEEIAGVATFLASSLGSSVTGQTVYADCGFS 348
Q V YN+MG AK++LE+ R LA ELG G+RVN +S GP+RT+AAR I GF M ++AA+ AP+GR A+ EE+ +A FL S LGS +TGQTVY D G S
Sbjct: 153 QVVPKYNVMGVAKAALEAATRYLASELGAQ-------GVRVNTISAGPMRTIAARSIPGFGTMYEKAAQSAPLGRNATPEEVGKLALFLLSDLGSGITGQTVYVDAGAS 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149679.3321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig149679.3321.1 >prot_H-elongata_contig149679.3321.1 ID=prot_H-elongata_contig149679.3321.1|Name=mRNA_H-elongata_contig149679.3321.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp MSSSVWWQAVANYNIMGPAKSSLESCARALAQELGGNPASVGPGGIRVNCback to top mRNA from alignment at H-elongata_contig149679:312..671+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig149679.3321.1 ID=mRNA_H-elongata_contig149679.3321.1|Name=mRNA_H-elongata_contig149679.3321.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=360bp|location=Sequence derived from alignment at H-elongata_contig149679:312..671+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig149679:312..671+ >mRNA_H-elongata_contig149679.3321.1 ID=mRNA_H-elongata_contig149679.3321.1|Name=mRNA_H-elongata_contig149679.3321.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at H-elongata_contig149679:312..671+ (Himanthalia elongata Himel1 dioecious)back to top |