prot_H-elongata_contig149468.3309.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149468.3309.1
Unique Nameprot_H-elongata_contig149468.3309.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: D7FZH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZH3_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 3.280e-56
Identity = 79/145 (54.48%), Postives = 114/145 (78.62%), Query Frame = 0
Query:    1 MADWTAFTTIGTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMSQWCR 145
            + DW+AFT +G +++GT+LH W+ FLE +  S+V+ +R+K+K+GRVVLQV +D TIGA+++N+G FA +T+ +A LTGR  PLP+L S++  +V+S +  MMM N +LWPWVSF+NF ++PA  RVLV+N VAV W YLMS+WCR
Sbjct:  145 LVDWSAFTLVGAVFIGTVLHHWYGFLERMGNSEVITSRIKSKWGRVVLQVVLDQTIGASLVNSGYFACHTVCLAGLTGRAFPLPELGSSIVEKVTSRYVVMMMNNFRLWPWVSFVNFAFIPADLRVLVSNFVAVLWGYLMSKWCR 289          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A7S2SVB6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVB6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 6.900e-21
Identity = 46/129 (35.66%), Postives = 74/129 (57.36%), Query Frame = 0
Query:   13 LYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            L+LG  LH WFNF++ + +   +    K+   RV++Q  +D T+G   +N G F    +L   L G L PL         +++S  W  ++ N +LWP  +++NF++VP K+RVL +N VAVFW+  +S
Sbjct:  130 LFLGPSLHYWFNFIDYVGKLPAIAKLKKSV--RVLVQTFVDQTVGVVTINGGFFFFFAVLQNTLDGTLFPLTRTLGQGWEKITSLMWVTLLANWRLWPLANWVNFQFVPLKYRVLFSNFVAVFWSIYLS 256          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A7S0UHY9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UHY9_HEMAN)

HSP 1 Score: 72.0 bits (175), Expect = 2.880e-12
Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 0
Query:    7 FTTIGTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTI---LVAALTGRLSPLPDLWSA--------VRH---RVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMSQ 142
            F   G      L   W+  +ES     +       KF R +L+  +D T+ +  + T  F   T+   L+A L  +++ LP + S         V H   +V+ N W  ++EN K+WP V  +NF  VP KF+VL  NLVA++WN+++S 
Sbjct:  134 FALWGAFGFTPLAFKWYGGMESALSQDI-------KF-RFLLKTALDQTVFSTGITTLTFMCITVVEGLLAPLEWKMNALPRITSQSVLPLTTLVDHGWTKVTRNLWETLLENWKVWPAVQLLNFSVVPVKFQVLFVNLVAIWWNFVLSM 275          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: UPI001E8CB821 (uncharacterized protein n=1 Tax=Boeremia exigua TaxID=749465 RepID=UPI001E8CB821)

HSP 1 Score: 67.4 bits (163), Expect = 3.260e-11
Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 0
Query:   11 GTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            G L  G     W+  L              +K G +V +V  D  + A + N G+F  +   +A L G         S++R R+ + + P + +N  +WPWV F+NF+YVPA  RVLV N++++ WN  +S
Sbjct:   26 GGLIFGPAATTWYGLLTR-------HVNFASKNGTIVARVACDQLLFAPV-NMGLFLSS---MAYLEG---------SSIRDRLGAAYVPGLTKNFMVWPWVQFVNFKYVPADLRVLVVNVISLGWNCYLS 136          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A162YUK6_DIDRA (Integral component of membrane n=1 Tax=Didymella rabiei TaxID=5454 RepID=A0A162YUK6_DIDRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.000e-11
Identity = 41/131 (31.30%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   11 GTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            G +  G     W+  L            + +K G +V +V  D  + A + N G+F  +   +A L G         S+V+ R++S + P + +N  +WPWV F+NF+YVPA  RVLV N++++ WN  +S
Sbjct:  137 GGIIFGPAATTWYGILTK-------HVNLSSKNGTIVARVACDQFLFAPV-NMGLFLTS---MAYLEG---------SSVKDRLNSAYVPGLTKNFMVWPWVQFVNFKYVPADLRVLVVNVISLGWNCYLS 247          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A8H7IWD6_9PLEO (Uncharacterized protein n=2 Tax=Didymellaceae TaxID=683158 RepID=A0A8H7IWD6_9PLEO)

HSP 1 Score: 67.8 bits (164), Expect = 4.020e-11
Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   11 GTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            G +  G     W+  L            + +K G ++ +V  D  + A + N G+F  +   +A L G         S+V+ R++S + P + +N  +WPWV F+NF+YVPA  RVLV N++++ WN  +S
Sbjct:   57 GGVIFGPAATTWYGILTK-------HVNLSSKNGTILARVACDQFLFAPV-NMGLFLTS---MAYLEG---------SSVKERLNSAYVPGLTKNFMVWPWVQFVNFKYVPADLRVLVVNVISLGWNCYLS 167          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A0U5FUK1_ASPCI (Uncharacterized protein n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5FUK1_ASPCI)

HSP 1 Score: 66.6 bits (161), Expect = 8.260e-11
Identity = 43/145 (29.66%), Postives = 66/145 (45.52%), Query Frame = 0
Query:    9 TIGTLYLGTLLHIWFNFLES------------LAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            T   L L  L  +W   LES              ++K  + + K      V ++ +D  IG A         NT+   A  G L      +  ++ ++ ++FWP+M+  LKLWP+VS +NF  VPA  R+LV +L  V W   +S
Sbjct:   47 TTSALILSPLSFLWLEGLESRFPSFINDKPTATGKAKTNKKKPKLNVRNTVAKIIVDQVIGGAW--------NTVAFIATMGLLRGQD--YEVIKGQIQNDFWPIMLAGLKLWPFVSILNFTVVPADKRLLVGSLFGVVWGIYLS 181          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A1Y2MAH0_EPING (Uncharacterized protein n=1 Tax=Epicoccum nigrum TaxID=105696 RepID=A0A1Y2MAH0_EPING)

HSP 1 Score: 66.6 bits (161), Expect = 1.090e-10
Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   11 GTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            G +  G     W+  L              +K G +V +V  D  + A + N G+F ++T+  A L G         S+VR R++  + P + +N  +WPWV F+NF+YVPA  RVLV N++++ WN  +S
Sbjct:   57 GGIIFGPAATKWYGLLTK-------HVNFASKNGTIVARVACDQLVFAPV-NMGLF-LSTM--AYLEG---------SSVRDRLAQAYVPGLTKNFMVWPWVQFVNFKYVPADLRVLVVNVISLGWNCYLS 167          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A5M3Z2N4_ASPTE (Integral membrane protein n=1 Tax=Aspergillus terreus TaxID=33178 RepID=A0A5M3Z2N4_ASPTE)

HSP 1 Score: 65.5 bits (158), Expect = 2.260e-10
Identity = 45/147 (30.61%), Postives = 68/147 (46.26%), Query Frame = 0
Query:    7 FTTIGTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGR------------VVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            FTT   +    L+ +W   LE      V   R K+K                V+++ +D T+GA          NT+L  A  G L    + + A+  ++ ++FWPM++  LKLWP VS +NF  VP   R+LV +L  V W   +S
Sbjct:   46 FTTYAFIS-SPLMFLWGEGLEKAFPGSVESERTKSKTDNDKTQKPRLNVKNTVVKITIDQTVGAVW--------NTVLFIATLGLLRG--EAFEAILDQIRTDFWPMVIAGLKLWPLVSIMNFTVVPVDQRLLVGSLFGVVWAVYLS 181          
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Match: A0A1L9S9L5_9EURO (Uncharacterized protein n=1 Tax=Penicilliopsis zonata CBS 506.65 TaxID=1073090 RepID=A0A1L9S9L5_9EURO)

HSP 1 Score: 64.7 bits (156), Expect = 4.130e-10
Identity = 41/134 (30.60%), Postives = 70/134 (52.24%), Query Frame = 0
Query:   18 LLHIWFNFLES--------LAQSKVVRTRVKTKFG--RVVLQVGMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWPMMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMS 141
            L+ +W N LE+          +++   T+ KT+      V +V +D T+G A +     A+    + AL G+     D +  +  ++ ++FWP+M+  LK+WP+VS +NF  VPA  R+LV +L  V W   +S
Sbjct:   54 LIFLWLNGLEAQFPGTTTTTTKTEKGETQKKTQLNVPNTVAKVVLDQTVGGAWIT----ALFIATMGALRGQ-----D-YGLIMEQIKTDFWPIMIAGLKMWPFVSILNFTVVPADQRLLVNSLFGVIWAVYLS 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149468.3309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH3_ECTSI3.280e-5654.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SVB6_9STRA6.900e-2135.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0UHY9_HEMAN2.880e-1231.33Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
UPI001E8CB8213.260e-1131.30uncharacterized protein n=1 Tax=Boeremia exigua Ta... [more]
A0A162YUK6_DIDRA4.000e-1131.30Integral component of membrane n=1 Tax=Didymella r... [more]
A0A8H7IWD6_9PLEO4.020e-1130.53Uncharacterized protein n=2 Tax=Didymellaceae TaxI... [more]
A0A0U5FUK1_ASPCI8.260e-1129.66Uncharacterized protein n=1 Tax=Aspergillus calido... [more]
A0A1Y2MAH0_EPING1.090e-1032.06Uncharacterized protein n=1 Tax=Epicoccum nigrum T... [more]
A0A5M3Z2N4_ASPTE2.260e-1030.61Integral membrane protein n=1 Tax=Aspergillus terr... [more]
A0A1L9S9L5_9EURO4.130e-1030.60Uncharacterized protein n=1 Tax=Penicilliopsis zon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 87..141
e-value: 3.8E-17
score: 62.2
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 5..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..145
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 46..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149468contigH-elongata_contig149468:203..1491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149468.3309.1mRNA_H-elongata_contig149468.3309.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149468 203..1494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149468.3309.1 ID=prot_H-elongata_contig149468.3309.1|Name=mRNA_H-elongata_contig149468.3309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MADWTAFTTIGTLYLGTLLHIWFNFLESLAQSKVVRTRVKTKFGRVVLQV
GMDSTIGAAMLNTGVFAINTILVAALTGRLSPLPDLWSAVRHRVSSNFWP
MMMENLKLWPWVSFINFRYVPAKFRVLVTNLVAVFWNYLMSQWCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22