mRNA_H-elongata_contig14887.3276.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A6H5LAB2_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB2_9PHAE) HSP 1 Score: 357 bits (916), Expect = 5.340e-116 Identity = 183/281 (65.12%), Postives = 216/281 (76.87%), Query Frame = 1
Query: 1 ASEIINRATLALVEPADKAPARYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDLTPLLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLVAAINIS----------------GGGNDEMMATTSRPTRRS 795
A+E ++RA A + K PARYVRAFCGN++ AL+RW+ATL+WR+E+ ID+IL EPQ FF +IRR FPSH+SG+SR G+IVV+EKLG VD++TL+RKLGVTVP LRHW FVSEYMYRVLQPTDSAQQ+ I D+K ++IQ++AG QEY+K AQLAR +YVER HK FVVNAPAWFGLSFRVVSPFLS RT+QKIRILGSDLT L DEI+PQ LPVEYGG T PV DSPEER+LRRLV AIN + GGG T RP+ RS
Sbjct: 112 AAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYEKLGAVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLTVLQDEIDPQLLPVEYGGTMTEPVSDSPEERNLRRLVDAINANADAEATVAATPKNGDDGGGAKXXXXPTRRPSFRS 392
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: D7G7T8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T8_ECTSI) HSP 1 Score: 304 bits (779), Expect = 1.950e-98 Identity = 150/221 (67.87%), Postives = 183/221 (82.81%), Query Frame = 1
Query: 1 ASEIINRATLALVEPADKAPARYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDLTPLLDEIEPQFLPVEYG 663
A+E ++RA A + K PARYVRAFCGN++ AL+RW+ATL+WR+E+ ID+IL EPQ FF +IRR FPSH+SG+SR G+IVV++KLG VD++TL+RKLGVTVP LRHW FVSEYMYRVLQPTDSAQQ+ I D+K ++IQ++AG QEY+K AQLAR +YVER HK FVVNAPAWFGLSFRVVSPFLS RT+QKIRILGSDL+ L DEI PQ + + G
Sbjct: 114 AAEAMDRAAAAPLALEHKIPARYVRAFCGNEKHALERWKATLKWRKENEIDAILNEPQQFFHDIRRYFPSHMSGRSRGGHIVVYDKLGGVDMRTLRRKLGVTVPMLLRHWIFVSEYMYRVLQPTDSAQQINIEDMKDVRIQTLAGKIQEYVKAVAQLARLHYVERCHKTFVVNAPAWFGLSFRVVSPFLSARTRQKIRILGSDLSALQDEIAPQAVMRDLG 334
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A485K5A0_9STRA (Aste57867_436 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5A0_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.780e-50 Identity = 89/229 (38.86%), Postives = 145/229 (63.32%), Query Frame = 1
Query: 64 RYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDLT--PLLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLVAAINISG 744
R++ A G++E RW AT +WR+E+NID +L EPQP F I++ +P + GKS++G+ V +E+LG VD KTLK K G+ + LRH+ F++E++++VL+P+DS + +T++DV+ + GD ++++ A +Y ERS ++ V+N P WF +++R +SP + P TK KIRI S + LL I+ LP YGG + + +S EE+ L + V + +SG
Sbjct: 31 RFIAAEKGDEEKGRHRWEATRQWRRENNIDGLLHEPQPHFDIIKKNYPQYFHGKSKNGHCVYYERLGYVDFKTLK-KSGLNMDQLLRHYMFITEFLWKVLEPSDSGRSITVLDVENFGFYDLTGDVTSFIRQAMAFAAAHYPERSAQIIVINVPGWFYMTWRAMSPMIDPVTKAKIRICNSSTSRDELLAAIDLDQLPSNYGGTSCA-LGESDEEKRLAQHVQSY-LSG 256
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A835YIT9_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIT9_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.910e-50 Identity = 93/219 (42.47%), Postives = 137/219 (62.56%), Query Frame = 1
Query: 151 DSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQK----------------------IRILGSDLTPLLD-EIEPQFLPVEYGGLNTTPVEDSPEERDLRRLVAAINI 738
D IL EPQP F I++ FP+ I G+ R G++VV+EK+G + +K L + GVT+P LRH+ F EY++RV++P AQ +TI DV+G+ + + G E+ K AQ A +YVER ++ F++N+PAWF L + +SPF+ RTK+K +R+LGS+ P+L EIEP +P+EYGG TTP+ +SPEE +L +V AIN+
Sbjct: 96 DMILSEPQPMFNIIKQHFPAFIYGRGRKGHVVVYEKVGSIHMKELAHQ-GVTLPMLLRHYVFSMEYLWRVVEPRGDAQLITIQDVQGIGLSDLTGMALEFAKGAAQTASKHYVERCYRTFIINSPAWFPLLWAAISPFVPLRTKKKASALDCPCGNCLSNHVATASIHVRVLGSNYRPVLQQEIEPDMIPLEYGGSCTTPLHESPEEANLSAMVTAINM 313
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A7S3Y7R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7R1_HETAK) HSP 1 Score: 182 bits (463), Expect = 7.580e-50 Identity = 91/243 (37.45%), Postives = 148/243 (60.91%), Query Frame = 1
Query: 58 PARYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSD-LTPLLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLVAAIN-------ISGGGNDEM 762
P RY+R G+ E A +RW TLRWR+E N+D IL EPQP+F I++ +P + R+G + +E++G+ DI+ ++ + GVT+ +RH+ FVSE+++R ++ D AQ +TI+D++G GD +E+ ++ + + +++YVERS+K+FV+NAP WF + ++VV P L T++KI I G LL + P+ +P EYGG +S E+ + V N +G G+DEM
Sbjct: 161 PDRYIRGCDGDLEEARRRWALTLRWRREQNVDGILDEPQPYFFVIKKYYPHFTYKRGRNGCVTYYEQVGRADIEAMRAR-GVTIAALVRHYVFVSEFLWRRIEADDDAQAITIMDIEGCGFSQFKGDTKEFFQQCSSVIQSHYVERSNKIFVINAPGWFNMIWKVVRPMLHENTQRKISICGKGRYEELLAYVGPENVPAEYGGTCRDAFYNSELEKPMHDFVREKNQASPLGLYTGEGDDEM 402
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A3R6Z8R0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z8R0_9STRA) HSP 1 Score: 177 bits (449), Expect = 7.020e-48 Identity = 88/230 (38.26%), Postives = 141/230 (61.30%), Query Frame = 1
Query: 64 RYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDLTP--LLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLVAAINISGG 747
R++ A GN E R+ +TL+WR+E+N+D +L EPQP F I++ +P + GKS G+ V +EK+GK+D+K +K G+T+ LRH+ +++EYM+ +L+P+DS + VT++DV G+ +AGD ++++ Y ERS ++F+VN P WF + + VVSP + P TK+KIRI LL I LP +YGG ++ + +S EE L + V + + G
Sbjct: 321 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAA-GLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGG-SSVKLGESDEEVALAKYVDQVLAASG 548
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A6G0WJQ6_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJQ6_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.230e-47 Identity = 85/222 (38.29%), Postives = 139/222 (62.61%), Query Frame = 1
Query: 64 RYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDLTP--LLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLV 723
R++ A GN E +R+ ATL+WR+E+ ID++L EPQP F I++ +P + GKS++G+ V +E+LG VD KTLK K G+++ L H+ +++E+++++L+P+DS + +T++DV + GD ++++ A +Y ERS ++ V+N P WF ++R +SP + P TK KIRI S LL I+ LP YGG + + +S EER L + V
Sbjct: 32 RFIAAEKGNLEKGRQRYEATLKWRRENRIDTLLYEPQPHFHIIKQNYPQYFHGKSKNGHRVYYERLGYVDFKTLK-KSGLSMDQLLHHYMYITEFLWKILEPSDSGRSITVLDVANFGFFDLTGDVTSFIRQAMAFAGEHYPERSAQIIVINVPGWFNATYRAMSPLIDPVTKAKIRICTSSTATQELLAAIDIDQLPSNYGGTSCA-LGESEEERILAQHV 251
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A024UU13_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU13_9STRA) HSP 1 Score: 177 bits (448), Expect = 7.150e-47 Identity = 91/233 (39.06%), Postives = 143/233 (61.37%), Query Frame = 1
Query: 64 RYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPTDSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDLTP--LLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLV-AAINISGGGN 753
R++ A GN E R+ +TL+WR+E+N+D +L EPQP F I++ +P + GKS G+ V +EK+GK+D+K +K G+T+ LRH+ +++EYM+ +L+P+DS + VT++DV G+ +AGD ++++ Y ERS ++F+VN P WF + + VVSP + P TK+KIRI LL I LP +YGG ++ + +S EE L + V A+ SG N
Sbjct: 477 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAA-GLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGG-SSVKLGESDEEVALAKYVDQALAASGHPN 707
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: A0A6H5K979_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K979_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.020e-46 Identity = 94/230 (40.87%), Postives = 147/230 (63.91%), Query Frame = 1
Query: 58 PARYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPT-DSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDL----TPLLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLVAAI 732
P RY+R G+ A +RWR TL WR + ID +L EPQP F I+R +P +I ++R+G V E G++D+ + R GV+ RH+ FV+EYM+ VL+P ++ Q VT++DV+GL ++ +AG+ ++K+ + + +YVERS+++F+VNAP++F L +RV+ P L+ RT+ KI I+ +D LL+ I P+ LP +YGG + +S EE DLR VA+I
Sbjct: 302 PGRYLRGCAGDPVEAERRWRLTLEWRAKERIDEVLREPQPHFELIKRHYPHYIHRRARNGCPVWIELPGRIDLPAI-RSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGMRDLAGEALGFVKQATAIIQDHYVERSNRMFIVNAPSYFSLIWRVIRPMLNERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLGESEEETDLRAYVASI 530
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Match: D8LBN1_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN1_ECTSI) HSP 1 Score: 177 bits (450), Expect = 1.690e-46 Identity = 94/230 (40.87%), Postives = 147/230 (63.91%), Query Frame = 1
Query: 58 PARYVRAFCGNKEVALKRWRATLRWRQESNIDSILGEPQPFFRNIRRCFPSHISGKSRSGNIVVFEKLGKVDIKTLKRKLGVTVPDFLRHWTFVSEYMYRVLQPT-DSAQQVTIVDVKGLKIQSVAGDFQEYLKKTAQLARTYYVERSHKVFVVNAPAWFGLSFRVVSPFLSPRTKQKIRILGSDL----TPLLDEIEPQFLPVEYGGLNTTPVEDSPEERDLRRLVAAI 732
P RY+R G+ A +RWR TL WR + ID +L EPQP F I+R +P +I ++R+G V E G++D+ + R GV+ RH+ FV+EYM+ VL+P ++ Q VT++DV+GL ++ +AG+ ++K+ + + +YVERS+++F+VNAP++F L +RV+ P L+ RT+ KI I+ +D LL+ I P+ LP +YGG + +S EE DLR VA+I
Sbjct: 304 PGRYLRGCAGDPVEAERRWRLTLEWRAKERIDEVLREPQPHFELIKRHYPHYIHRRARNGCPVWIELPGRIDLPAI-RSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGMRDLAGEALGFVKQATAIVQDHYVERSNRMFIVNAPSYFSLIWRVIRPMLNERTQAKIGIINTDAKKIAAALLECIAPENLPRQYGGTCPLDLGESEEELDLRTYVASI 532 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14887.3276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig14887.3276.1 >prot_H-elongata_contig14887.3276.1 ID=prot_H-elongata_contig14887.3276.1|Name=mRNA_H-elongata_contig14887.3276.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=302bp ASEIINRATLALVEPADKAPARYVRAFCGNKEVALKRWRATLRWRQESNIback to top mRNA from alignment at H-elongata_contig14887:382..2823+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig14887.3276.1 ID=mRNA_H-elongata_contig14887.3276.1|Name=mRNA_H-elongata_contig14887.3276.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2442bp|location=Sequence derived from alignment at H-elongata_contig14887:382..2823+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig14887:382..2823+ >mRNA_H-elongata_contig14887.3276.1 ID=mRNA_H-elongata_contig14887.3276.1|Name=mRNA_H-elongata_contig14887.3276.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1812bp|location=Sequence derived from alignment at H-elongata_contig14887:382..2823+ (Himanthalia elongata Himel1 dioecious)back to top |