mRNA_H-elongata_contig147817.3227.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: D7FSF6_ECTSI (Diphthine--ammonia ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF6_ECTSI) HSP 1 Score: 242 bits (617), Expect = 1.350e-77 Identity = 113/143 (79.02%), Postives = 129/143 (90.21%), Query Frame = 1
Query: 1 ITDVLAQARHERLDALVVPLGGGTGPYPDSYAVTLKAALKPLRVKALAFGDLHLQELRSWREDTFSGAYPCEFPLFEVPYEELLARLWAE--KGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLPEGVDAMGENGEFHTHV 423
ITDVL QARHE +D L VPLGGG+GP+PD+Y+VTLKAALKPLRVKALAFGDLHLQEL+SWR+D FSGAYPCEFPLFEVPYEELL+RLW E GV L++ +VST H+GLEG+S GDVYC+AF+KRLP+ VDAMGENGEFHTHV
Sbjct: 163 ITDVLEQARHEGVDLLAVPLGGGSGPFPDAYSVTLKAALKPLRVKALAFGDLHLQELKSWRQDVFSGAYPCEFPLFEVPYEELLSRLWEEIAAGVTLKVSSVSTDHKGLEGISVGDVYCEAFVKRLPDIVDAMGENGEFHTHV 305
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A835YXG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG3_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.630e-36 Identity = 77/151 (50.99%), Postives = 94/151 (62.25%), Query Frame = 1
Query: 1 ITDVLAQARHERLDALVVPLGGG-----TGPYPDSYAVTLKAALKPL--RVKALAFGDLHLQELRSWREDTFSGAYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGL--EG-LSKGDVYCKAFIKRLPEGVDAMGENGEFHTHV 423
I DV+ QA+ ++D L VPL GG GPY D+ + AAL+P R++AL FGDLHL ++R+WRE TF+ YPC FPLF PY EL ARLWAE VS + L +G L G Y AF+ LP+GVD MGENGEFHTHV
Sbjct: 155 IRDVMDQAKALQVDLLAVPLKGGEASTGAGPYVDA----VMAALEPFKQRIRALCFGDLHLVDIRAWREATFTDTYPCRFPLFNTPYAELKARLWAEAERGTISVTVSAVRDDLLEQGPLRIGAQYDAAFVGALPQGVDEMGENGEFHTHV 301
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A345YEE0_9SPHN (Diphthami_syn_2 domain-containing protein n=1 Tax=Erythrobacter aureus TaxID=2182384 RepID=A0A345YEE0_9SPHN) HSP 1 Score: 100 bits (250), Expect = 3.000e-23 Identity = 62/146 (42.47%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 1 ITDVLAQARHERLDALVVPLGGGTGPYPDSYAVTLKAALKPLRVKALAFGDLHLQELRSWREDTF-----SGAYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLPEGVDAMGENGEFHTHV 423
I +V+AQA H L + VPL G Y D A L AL P L FGDLHL +RSWRE+ F + FPL++ Y LLA+L A + CA+S LE +S GD++ + +LP G+DA GENGEFHT V
Sbjct: 129 IAEVVAQAEHLGLPLIGVPLQSGPD-YLDQVAPAL--ALVP-GCSGLCFGDLHLTHIRSWREEAFRKHPATSGMQLSFPLWQQDYALLLAKLAASGAI----CAISAVRHDLESVSVGDIFDANCVAKLPRGIDAFGENGEFHTRV 266
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A6I7QBU6_9BACT (Diphthami_syn_2 domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7QBU6_9BACT) HSP 1 Score: 97.8 bits (242), Expect = 9.600e-23 Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 1 ITDVLAQARHERLDALVVPLGGGTGPYPDSYAVTLKAALK-----PLRVKALAFGDLHLQELRSWREDTFSG-AYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLPEGVDAMGENGEFHTHV 423
I V QA L VPL YP S LK K P + L FGDLHL+++R WRE+ FS Y C FP+++ PYEEL RL E+ V++++ V ++++G + GD++ + + LP+ +D MGE GEFHT V
Sbjct: 56 IRRVQNQAMKLGLILYTVPLS-----YPSSNEQYLKTLSKSFEQLPFSIHHLIFGDLHLEDIRKWREEQFSEMGYKCRFPIWKKPYEELFDRL-EEENVSIKVSGVMSEYDGY--IKPGDLFTREYAHSLPKQIDRMGEKGEFHTEV 194
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A1X6PBK6_PORUM (Diphthine--ammonia ligase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBK6_PORUM) HSP 1 Score: 97.1 bits (240), Expect = 4.110e-21 Identity = 65/147 (44.22%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 7 DVLA-QARHERLDALVVPLGGGTGPYPDSYAVTLKAAL-------KPLRVKALAFGDLHLQELRSWREDTFSGAYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLPEGVDAMGENGEFHTHV 423
DV+A QA L + VPL G SY ++A + + L V A FGDLHL +R WRE F G FPL+ VPY EL RL A G +RL AV + G++ GDV+ A + RLP GVDA GENGEFHT V
Sbjct: 229 DVVARQAVALHLPLVAVPLPSGGAGAGTSYGDRIRAVVGWLAAPPRRLAVGAFVFGDLHLAHIREWREAEFVGV-ALRFPLWRVPYAELGRRLVAA-GHPVRLTAVEDEACVAAGVAVGDVFDAALVARLPPGVDAWGENGEFHTVV 373
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A1Y2C0D4_9FUNG (Diphthine--ammonia ligase (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0D4_9FUNG) HSP 1 Score: 94.7 bits (234), Expect = 3.200e-20 Identity = 62/168 (36.90%), Postives = 91/168 (54.17%), Query Frame = 1
Query: 1 ITDVLAQARHERLDALVVPLGGGTGPYPDSYAVTLKAALKPLR-------------VKALAFGDLHLQELRSWREDTFSGAYPCEFPLFEVPYEE-LLARLWA---EKGVALRLCAVSTQ-------HEGLEGLSKGDV-YCKAFIKR--LPEGVDAMGENGEFHTHV 423
I D+ AQ+ L L+VP G + ++Y T+ AL+ L ++ L FGDL L+++R+WRE +FS YPC FPLFE+ +++ L+ RLW E + + A+ + EGLE +G+V Y K+ ++R PE VD MGE GEFHT V
Sbjct: 220 IGDISAQSSCLNLPLLLVPRGADSK--NETYIKTITDALEQLSREMSALDSSKSSTIQYLVFGDLFLEDIRAWRESSFSNLYPCRFPLFELDFQKNLMPRLWELCEEYEIRISFSAMENEVMKKWVNDEGLEKDDEGNVRYTKSLVERSDFPETVDLMGERGEFHTKV 385
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A358DN45_9DELT (Diphthami_syn_2 domain-containing protein n=2 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A358DN45_9DELT) HSP 1 Score: 91.7 bits (226), Expect = 1.010e-19 Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 1
Query: 7 DVLAQA-RHER----LDALVVPLGGGTGPYPDSYAVTLKAALKPLRVKALAFGDLHLQELRSWREDTFSG-----AYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLPEGVDAMGENGEFHTHV 423
+VL Q RH+R ++VPL GTG Y D + ++ V L FGDLHL +R+WRED FS + P PL+ +PYEELL L + V R+ AV+ + + +S GD++ + I RLP+G DA GENGEFH+ +
Sbjct: 122 EVLVQEIRHQRKRLGCAQVLVPLFPGTG-YMDRVLLGIQTLQFRTPVARLVFGDLHLDHVRTWREDAFSACSDIASIPIHLPLWGIPYEELLNDLESAP-VQARVSAVADE-TCAQVISVGDLFNRDLIARLPKGTDAFGENGEFHSCI 267
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A7X4E254_9BACT (Diphthami_syn_2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4E254_9BACT) HSP 1 Score: 89.4 bits (220), Expect = 8.090e-19 Identity = 60/145 (41.38%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 1 ITDVLAQARHERLDALVVPLGGGTGPYPDSYAVTLKAALKPLRVKALAFGDLHLQELRSWREDTFS------GAYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLPEGVDAMGENGEFHT 417
+ ++ QA H + L VPL G PY D + L P RV FGDLHL+ +R WR+ TF GA FPL+ VPY+EL+A L A GV + AV+ EG+ + GD + + I+RLP+ +D GENGEFHT
Sbjct: 130 LNQIVRQAEHLGVPLLGVPLHPGH-PYVDR--IHEAVGLVP-RVARFVFGDLHLEHIREWRDTTFRDLADELGA-TLHFPLWGVPYQELIADLEAS-GVPCEVSAVTEPAEGV--VEVGDWFDREMIERLPDRIDPFGENGEFHT 266
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A7S2KC50_9STRA (Diphthine--ammonia ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KC50_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.810e-18 Identity = 57/147 (38.78%), Postives = 85/147 (57.82%), Query Frame = 1
Query: 1 ITDVLAQARHERLDALVVPLGGGTGPYPDSYAVTLKAALKPLR------VKALAFGDLHLQELRSWREDTFSG-AYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLP-EGVDAMGENGEFHT 417
I +VL QA H + + VP+ G+ +SY +K ALK ++ VK+L FGDLHL+ ++SWR+D E+PL++VPY+ L+A L A + VA + A +T + +S+G + F K + +G DA GENGEFHT
Sbjct: 294 IDEVLKQAEHLDISLVGVPVHRGSS---ESYLTRIKCALKHIKDTTGQPVKSLVFGDLHLEHIKSWRDDELGKLGLELEYPLWKVPYDTLMADLVASE-VACVVSASTT-----DKVSEGTRFSSEFSKEIALQGCDAFGENGEFHT 431
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Match: A0A316TU23_9BACT (Diphthami_syn_2 domain-containing protein n=1 Tax=Rhodohalobacter mucosus TaxID=2079485 RepID=A0A316TU23_9BACT) HSP 1 Score: 85.1 bits (209), Expect = 7.520e-18 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 85 DSYAVTLKAALK--PLRVKALAFGDLHLQELRSWREDTFSG-AYPCEFPLFEVPYEELLARLWAEKGVALRLCAVSTQHEGLEGLSKGDVYCKAFIKRLPEGVDAMGENGEFHTHV 423
D+Y LK A + P +++ L FGDLHL+++R WRE+ F Y FP++ +EL+ RL E V +R+ AV E ++ GD+Y + + LP+ +D MGENGEFHT V
Sbjct: 82 DTYLNALKNAFQAIPYQIERLIFGDLHLKDIRKWREEQFHALGYNTAFPIWAKSVDELIDRLEKEP-VTIRVSAVMQSCR--EHIAPGDLYNRDYAYSLPDHIDPMGENGEFHTEV 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147817.3227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig147817.3227.1 >prot_H-elongata_contig147817.3227.1 ID=prot_H-elongata_contig147817.3227.1|Name=mRNA_H-elongata_contig147817.3227.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp ITDVLAQARHERLDALVVPLGGGTGPYPDSYAVTLKAALKPLRVKALAFGback to top mRNA from alignment at H-elongata_contig147817:516..938+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig147817.3227.1 ID=mRNA_H-elongata_contig147817.3227.1|Name=mRNA_H-elongata_contig147817.3227.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=423bp|location=Sequence derived from alignment at H-elongata_contig147817:516..938+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig147817:516..938+ >mRNA_H-elongata_contig147817.3227.1 ID=mRNA_H-elongata_contig147817.3227.1|Name=mRNA_H-elongata_contig147817.3227.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=846bp|location=Sequence derived from alignment at H-elongata_contig147817:516..938+ (Himanthalia elongata Himel1 dioecious)back to top |