mRNA_H-elongata_contig146745.3173.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A8F0FAV1_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAV1_9PHAE) HSP 1 Score: 174 bits (440), Expect = 6.570e-55 Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNIKILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNCKRLNYC+IYSIVEQKHGEK++NI+I F PQSPIL CINFFSKK YT+EWDVNECLSYQEKPGSWLIKDS+EL+FSSYLSFDL F
Sbjct: 1 MCICLNCKRLNYCEIYSIVEQKHGEKKNNIQIFFFPQSPILACINFFSKKNSYTIEWDVNECLSYQEKPGSWLIKDSIELDFSSYLSFDLLF 92
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A344PFD3_9PHAE (Uncharacterized protein n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A344PFD3_9PHAE) HSP 1 Score: 140 bits (354), Expect = 8.620e-42 Identity = 65/92 (70.65%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNIKILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R+N C++YSI+EQ+H EK F+PQ+PIL CINFFSKK+LYTLEWDVNECLSYQEKPGSWL + LNFSSYL FDL F
Sbjct: 1 MCICLNCDRINSCRVYSIIEQQHQEKLKCQTKPFSPQAPILLCINFFSKKRLYTLEWDVNECLSYQEKPGSWLESNQKRLNFSSYLLFDLLF 92
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A8F0F818_9PHAE (Uncharacterized protein n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F818_9PHAE) HSP 1 Score: 140 bits (352), Expect = 1.740e-41 Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNIKILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC+R+N C+IYSI+EQKH EK+ ++ +F PQSPIL CINFFSKKK Y EWDVNECLSYQEKPG WL+ + L SSYL+FDL F
Sbjct: 1 MCICLNCERINNCEIYSIIEQKHNEKRKRVENIFFPQSPILLCINFFSKKKNYLFEWDVNECLSYQEKPGKWLLLNPEILGSSSYLTFDLLF 92
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A5A4MIQ9_9PHAE (Uncharacterized protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MIQ9_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.470e-40 Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNIKILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R+N C++YSI+EQ+H EK F+PQ+PIL CINFFSKK+LY LEWDV+ECLSYQEKPGSWL + LNFSSYL FDL F
Sbjct: 1 MCICLNCDRINRCRVYSIIEQQHKEKMKCQTKPFSPQAPILLCINFFSKKRLYALEWDVSECLSYQEKPGSWLESNKKSLNFSSYLLFDLFF 92
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A1I9LVZ6_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVZ6_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.670e-39 Identity = 59/92 (64.13%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNIKILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R+N C++Y I+E++H EK +K F+PQ PIL C+NFF KK+LY +EWDVNECLSYQEKPGSWL ++ +L FSSYL FDL F
Sbjct: 1 MCICLNCDRINKCRLYFIIEEQHQEKIKGLKKSFSPQGPILVCLNFFFKKRLYIIEWDVNECLSYQEKPGSWLDRNQKKLKFSSYLLFDLLF 92
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A8F0F920_9PHAE (Uncharacterized protein n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0F920_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.020e-38 Identity = 64/94 (68.09%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNIKIL--FAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R++ C++YSIVEQKH EK+ K F PQSP L CINFFSKKKLY LEWDVNECLSYQEKPGSW+ + SSYLSFDL F
Sbjct: 1 MCICLNCNRIDNCEVYSIVEQKHNEKKKYQKKTRQFFPQSPTLLCINFFSKKKLYLLEWDVNECLSYQEKPGSWMSFNQKNFQHSSYLSFDLLF 94
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A0S0GLR5_COSCS (Conserved hypothetical plastid protein n=1 Tax=Costaria costata TaxID=2872 RepID=A0A0S0GLR5_COSCS) HSP 1 Score: 132 bits (331), Expect = 2.850e-38 Identity = 63/93 (67.74%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQS-NIKILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R+N C++YSIVEQKH EKQ+ K F PQSP L CINFFSK LY LEWDVNECLSYQEKPG+W++ SSYLSFDL F
Sbjct: 1 MCICLNCDRINNCEVYSIVEQKHNEKQAYKKKRQFFPQSPTLLCINFFSKNNLYLLEWDVNECLSYQEKPGNWMLISQKNSKNSSYLSFDLLF 93
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A7U3NIB4_9PHAE (Uncharacterized protein n=7 Tax=Laminariaceae TaxID=33636 RepID=A0A7U3NIB4_9PHAE) HSP 1 Score: 132 bits (331), Expect = 2.940e-38 Identity = 64/94 (68.09%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNI--KILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R+N C +Y IVEQKH EK+++ K F PQSP L CINFFSKK LY LEWDVNECLSYQEKPGSW+ D + SSYLSFDL F
Sbjct: 1 MCICLNCNRINNCDVYFIVEQKHNEKKNSHTKKRPFFPQSPTLLCINFFSKKNLYLLEWDVNECLSYQEKPGSWMAFDQKKSRNSSYLSFDLFF 94
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A8F0FAC9_9PHAE (Uncharacterized protein n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FAC9_9PHAE) HSP 1 Score: 130 bits (326), Expect = 1.700e-37 Identity = 64/94 (68.09%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNI--KILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R++ C++Y IVEQKH EKQ K LF PQSP L CIN FSKKKLY LEWDVNECLSYQEKPGSW+ + SSYLSFDL F
Sbjct: 1 MCICLNCNRIDNCKVYFIVEQKHNEKQKYYTKKKLFFPQSPTLLCINSFSKKKLYLLEWDVNECLSYQEKPGSWMSFNQKNSRNSSYLSFDLLF 94
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Match: A0A8F0F822_9PHAE (Uncharacterized protein n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0F822_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.170e-36 Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 1 MCICLNCKRLNYCQIYSIVEQKHGEKQSNI--KILFAPQSPILTCINFFSKKKLYTLEWDVNECLSYQEKPGSWLIKDSLELNFSSYLSFDLSF 276
MCICLNC R+ C++Y +VEQKH EK+++ K LF PQSP L CINFFS+K LY LEWD+NECLSYQEKPG+W++ +SYLSFDL F
Sbjct: 1 MCICLNCNRITNCEVYFVVEQKHNEKKNHHIKKSLFFPQSPTLVCINFFSQKNLYLLEWDINECLSYQEKPGNWIVFKQKNCREASYLSFDLFF 94 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig146745.3173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig146745.3173.1 >prot_H-elongata_contig146745.3173.1 ID=prot_H-elongata_contig146745.3173.1|Name=mRNA_H-elongata_contig146745.3173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp MCICLNCKRLNYCQIYSIVEQKHGEKQSNIKILFAPQSPILTCINFFSKKback to top mRNA from alignment at H-elongata_contig146745:588..866+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig146745.3173.1 ID=mRNA_H-elongata_contig146745.3173.1|Name=mRNA_H-elongata_contig146745.3173.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=279bp|location=Sequence derived from alignment at H-elongata_contig146745:588..866+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig146745:588..866+ >mRNA_H-elongata_contig146745.3173.1 ID=mRNA_H-elongata_contig146745.3173.1|Name=mRNA_H-elongata_contig146745.3173.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at H-elongata_contig146745:588..866+ (Himanthalia elongata Himel1 dioecious)back to top |