prot_H-elongata_contig145129.3091.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig145129.3091.1
Unique Nameprot_H-elongata_contig145129.3091.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
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BLAST of mRNA_H-elongata_contig145129.3091.1 vs. uniprot
Match: A0A6H5KUW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW2_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.830e-9
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 0 
Query:    6 CVTERRERGVLPESVAKGRLEVATFLIQGIVQKHAGGERDRVDLSKVN 53
            CV+     G   ++V KGRLEVAT+L+QG V+K AGGERDRVDLSKV+
Sbjct:  369 CVSPGVGEGETSDAVVKGRLEVATYLLQGTVKKDAGGERDRVDLSKVD 416
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BLAST of mRNA_H-elongata_contig145129.3091.1 vs. uniprot
Match: D7G4G1_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G1_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.830e-9
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 0 
Query:    6 CVTERRERGVLPESVAKGRLEVATFLIQGIVQKHAGGERDRVDLSKVN 53
            CV+     G   ++V KGRLEVAT+L+QG V+K AGGERDRVDLSKV+
Sbjct:  380 CVSPGVGEGQTSDAVGKGRLEVATYLLQGTVKKDAGGERDRVDLSKVD 427
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145129.3091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUW2_9PHAE1.830e-962.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4G1_ECTSI1.830e-962.50Heat shock protein 40 like protein/ DnaJ domain co... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig145129contigH-elongata_contig145129:1030..1188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig145129.3091.1mRNA_H-elongata_contig145129.3091.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig145129 1030..1188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig145129.3091.1 ID=prot_H-elongata_contig145129.3091.1|Name=mRNA_H-elongata_contig145129.3091.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
MDDDRCVTERRERGVLPESVAKGRLEVATFLIQGIVQKHAGGERDRVDLS
KVN
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