mRNA_H-elongata_contig145111.3090.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: D7G9I1_ECTSI (Cyclopropane-fatty-acyl-phospholipid synthase/ oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I1_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 4.430e-16 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 1
Query: 1 SDERLMPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKV 159
SDERLMPKRR AWSAWNYLG+STE+AAA A+RG AD KP +VTYWLNK+
Sbjct: 401 SDERLMPKRRAAWSAWNYLGKSTEIAAA----AARGHAADTKPAFVTYWLNKL 449
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A6H5K6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Z7_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 1.040e-12 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 16 MPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNK 156
MPKRR AWSAWNYLG+STE+AAA A+RG AD KP +VTYWLNK
Sbjct: 1 MPKRRAAWSAWNYLGKSTEIAAA----AARGHAADTKPAFVTYWLNK 43
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A835ZDJ8_9STRA (Mycolic acid cyclopropane synthetase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ8_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 6.510e-9 Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = 1
Query: 1 SDERLMPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKVLR------VVLSLLENVDKPGSPQSRQRLAYQTSHNAAFAQG 267
SD LMP+RR AWSAWNY+G S A+ A+RG KPVYVTYWLNK+ V +SL N P P R+ +T+H +G
Sbjct: 85 SDAALMPRRRAAWSAWNYMGDS-------ADAAARGG-GGAKPVYVTYWLNKLQNLDCRDSVFVSL--NPSAPPDPAKTHRVI-ETTHPQFTPEG 168
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A7S3UT52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT52_HETAK) HSP 1 Score: 53.5 bits (127), Expect = 4.870e-7 Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1
Query: 1 SDERLMPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKV 159
SD LMP+R+ AW+AWNYLG S R A +PV+VTYWLNK+
Sbjct: 29 SDPALMPRRKAAWAAWNYLG-------------SSARGAQQQPVFVTYWLNKL 68
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A549T3F0_9HYPH (FAD-dependent oxidoreductase n=2 Tax=Rhizobium TaxID=379 RepID=A0A549T3F0_9HYPH) HSP 1 Score: 51.6 bits (122), Expect = 1.530e-5 Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = 1
Query: 1 SDERLMPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKV 159
SDERLMPKR+G WS+WNY+G R D P+ VTYW+N++
Sbjct: 302 SDERLMPKRKGVWSSWNYIGGK--------------RVDDEAPLCVTYWMNRL 340
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A164UGB6_9AGAM (FAD/NAD(P)-binding domain-containing protein (Fragment) n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A164UGB6_9AGAM) HSP 1 Score: 51.6 bits (122), Expect = 1.550e-5 Identity = 32/95 (33.68%), Postives = 47/95 (49.47%), Query Frame = 1
Query: 1 SDERLMPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKVLRVVLS----LLENVDKPGSPQSRQRL-AYQTSHNAAFAQGV 270
+D RLMPKRR AWS+WNYL + T A+V V +TYW+N + + +L ++ P P +R+ + YQ H A+ V
Sbjct: 310 ADTRLMPKRRLAWSSWNYLTKRTP------------EKANVNQVSLTYWMNNLQHISEKKYGPVLVTLNPPFEPDARKTIDQYQYDHPVVSAESV 392
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: A0A536UVB9_9PROT (FAD-dependent oxidoreductase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536UVB9_9PROT) HSP 1 Score: 50.4 bits (119), Expect = 3.890e-5 Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 1 SDERLMPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKV--LRVVLSLLENVDKPGSPQSRQRLA-YQTSH 246
+D RLMPKRR AW+AWNYL A A+VA KPV V+YWLN++ L L+ ++ P P+ ++A ++ SH
Sbjct: 294 TDTRLMPKRRRAWAAWNYL--------APADVAVG------KPVAVSYWLNRLQPLPFQTPLMVTLNPPLEPRPETQIAEFEYSH 364
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Match: B8NZK3_POSPM (Predicted protein n=3 Tax=Postia placenta TaxID=104341 RepID=B8NZK3_POSPM) HSP 1 Score: 50.1 bits (118), Expect = 5.350e-5 Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 4 DERLMPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKVLRV 168
D+RLMPKRR AWS WNYL RST + A+ A+V V +TYW+N++ +
Sbjct: 255 DKRLMPKRRVAWSCWNYLTRSTVDKSGNAK-------ANVDQVSLTYWMNELQHI 302 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145111.3090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig145111.3090.1 >prot_H-elongata_contig145111.3090.1 ID=prot_H-elongata_contig145111.3090.1|Name=mRNA_H-elongata_contig145111.3090.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp MPKRRGAWSAWNYLGRSTEMAAAEAEVASRGRTADVKPVYVTYWLNKVLRback to top mRNA from alignment at H-elongata_contig145111:897..1172- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig145111.3090.1 ID=mRNA_H-elongata_contig145111.3090.1|Name=mRNA_H-elongata_contig145111.3090.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=276bp|location=Sequence derived from alignment at H-elongata_contig145111:897..1172- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig145111:897..1172- >mRNA_H-elongata_contig145111.3090.1 ID=mRNA_H-elongata_contig145111.3090.1|Name=mRNA_H-elongata_contig145111.3090.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig145111:897..1172- (Himanthalia elongata Himel1 dioecious)back to top |