prot_H-elongata_contig14468.3071.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14468.3071.1
Unique Nameprot_H-elongata_contig14468.3071.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length184
Homology
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: D7FQ23_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ23_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 8.460e-91
Identity = 140/179 (78.21%), Postives = 154/179 (86.03%), Query Frame = 0
Query:    3 RVACNASRRA-SMVRLLSSSTTARAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            RVACNA+RR  S  R++SSS  ARAPA LP+L YDYGELEPAISGEIMKIHHTKHHQA        YINNLNAA+EKLA+AE KGDVTAI+QLQ AIKFNGGGHLNHSIFWKNLAP  KGGG+MV G L++MIE QY S+GELTEK+S+A+V VQGSGWGWLGYDKVNKRLAIATCANQ
Sbjct:    5 RVACNAARRVPSAGRMISSSAAARAPAVLPDLTYDYGELEPAISGEIMKIHHTKHHQA--------YINNLNAAMEKLADAEAKGDVTAILQLQAAIKFNGGGHLNHSIFWKNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQ 175          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: A0A835YN63_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN63_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.820e-65
Identity = 109/170 (64.12%), Postives = 126/170 (74.12%), Query Frame = 0
Query:   12 ASMVRLLSSSTTARAP-ATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            A   +LLS+  TA A  ATLPEL Y Y +LEP I G+IM+IHH+KHH          Y+ NLNAA+ KLA+AE KGDV AIVQLQGAIKFNGGGH+NHSIFWKNLAP   GGGK+  G L + I+ Q+GS+  L EKLS+AAV VQGSGWGWL YDKV  +LAIAT ANQ
Sbjct:   14 AQQAKLLSAGRTALASQATLPELGYGYKDLEPYIDGQIMEIHHSKHHNT--------YVTNLNAAMTKLADAEAKGDVGAIVQLQGAIKFNGGGHINHSIFWKNLAPTSAGGGKLECGSLKDAIDSQFGSLDGLKEKLSAAAVGVQGSGWGWLAYDKVACKLAIATTANQ 175          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: A0A7S2D386_9STRA (Superoxide dismutase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D386_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.640e-63
Identity = 104/180 (57.78%), Postives = 130/180 (72.22%), Query Frame = 0
Query:    1 MRRVACNASRRASMVRLLSSSTTARAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            MR +  N S+   + R +S+S   R+  TLP+L Y YGELEP I+GEIM+IHH+KHH          Y+ NLN A EKLA AE  GDVTA+VQLQGAIKFNGGGHLNHSIFW+NLAP  KGGG +  G L+ +I+ ++GS   + EK+++A VAVQGSGWGWLGYDK +  +A+A CANQ
Sbjct:    8 MRSIVINTSKFRGISRSVSAS---RSIFTLPDLKYGYGELEPVITGEIMEIHHSKHHNT--------YVTNLNIASEKLAAAEAAGDVTAMVQLQGAIKFNGGGHLNHSIFWENLAPPSKGGGGVPEGELAALIDAKFGSFDAMKEKMTAATVAVQGSGWGWLGYDKTSGSVAVACCANQ 176          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: A0A7S2SP93_9STRA (Superoxide dismutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP93_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.950e-62
Identity = 95/162 (58.64%), Postives = 123/162 (75.93%), Query Frame = 0
Query:   19 SSSTTARAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            S++ ++R+  TLP+L+Y YGELEP ISGEIM++HH+KHH          Y+ NLNA +E+LAEAE KGDVT IVQLQ AIKFNGGGHLNHSIFW+NLAP  KGGG    G L+ +I++++GS   + +K+++A VAVQGSGWGWLGYDK +  +A+  C NQ
Sbjct:   19 STTASSRSVFTLPDLSYGYGELEPVISGEIMELHHSKHHNT--------YVTNLNAGMEQLAEAEHKGDVTKIVQLQQAIKFNGGGHLNHSIFWENLAPPSKGGGGEPTGELAALIDKKFGSFDAMKDKMTAATVAVQGSGWGWLGYDKASDSVAVTCCFNQ 172          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: A0A7S4M2S9_9EUKA (Superoxide dismutase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2S9_9EUKA)

HSP 1 Score: 197 bits (501), Expect = 1.060e-60
Identity = 97/175 (55.43%), Postives = 123/175 (70.29%), Query Frame = 0
Query:    8 ASRRASMVRLLSSSTTA--RAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            ASRR+  +R+L  + +A      TLP+L YDYG LEPA+SGEIM IHHTKHHQ         Y+ NLNAA EK+ +A+ KGD+ A++ LQGAIKFNGGGH+NHSIFW+NL P  +GGG +  GPLS  I  ++GS+     K ++   A+QGSGWGWLGYDK   ++ IATCANQ
Sbjct:   12 ASRRSLALRVLPRAFSAVPSTSFTLPDLTYDYGALEPAVSGEIMTIHHTKHHQT--------YVTNLNAAYEKMLDAQAKGDIDAVIALQGAIKFNGGGHVNHSIFWQNLCPISEGGGVLQDGPLSAAITAEFGSLEAFQAKFNATTAAIQGSGWGWLGYDKAADKIKIATCANQ 178          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: A0A151ZF37_9MYCE (Superoxide dismutase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZF37_9MYCE)

HSP 1 Score: 195 bits (496), Expect = 4.170e-60
Identity = 92/159 (57.86%), Postives = 118/159 (74.21%), Query Frame = 0
Query:   22 TTARAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            +T+  P TLP+L YDYG LEP ISG+IMK+HH KHHQA        Y+ NLN +LEK A+AE+  DV  ++QLQ AIKFNGGGH+NHSIFWKNLAP+ + GG    GPL++ I +Q+GS+ +L +K+S+  +A+QGSGWGWLGYDK   +L I T ANQ
Sbjct:   17 STSGTPYTLPDLPYDYGALEPVISGDIMKLHHQKHHQA--------YVTNLNVSLEKYAKAEEAKDVATMIQLQSAIKFNGGGHVNHSIFWKNLAPKNQLGGVAPEGPLADAINKQFGSLDKLIDKMSATTLAIQGSGWGWLGYDKATDKLVITTQANQ 167          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: C1BRR0_CALRO (Superoxide dismutase n=2 Tax=Caligus rogercresseyi TaxID=217165 RepID=C1BRR0_CALRO)

HSP 1 Score: 194 bits (492), Expect = 1.790e-59
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 0
Query:   14 MVRLLSSSTTARAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            M + LS    +R+  TLP+L Y YG LEP ISG IM++HH+KHHQ         Y+NNLNAA EKL+EA  K D++ ++ LQGA+KFNGGGHLNHSIFW NL P      K   G L E+I   +GS+G + EKLS + VA+QGSGWGWLGY K  K+L IATCANQ
Sbjct:    9 MPKRLSPLVVSRSKHTLPDLPYSYGALEPVISGAIMELHHSKHHQT--------YVNNLNAAEEKLSEAIAKNDISTVISLQGALKFNGGGHLNHSIFWTNLCPSDSSSSKEPSGQLLELINRDFGSLGAMKEKLSGSTVAIQGSGWGWLGYCKAEKKLKIATCANQ 167          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: F0YBC5_AURAN (Superoxide dismutase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC5_AURAN)

HSP 1 Score: 191 bits (486), Expect = 1.450e-58
Identity = 95/168 (56.55%), Postives = 116/168 (69.05%), Query Frame = 0
Query:   13 SMVRLLSSSTTARAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            S  R ++  + AR   TLP L+YDYG LEP ISG+IM+IHH+KHH          Y+ NLNAA+E L +A   GDVTAIV  QGAIKFNGGGHLNHSIFW+NLAP  +GGG    G L+  I+ ++G V  +  KLS+  V VQGSGWGWLGY+K   +LA+ATC NQ
Sbjct:    8 STARAVALRSGARTKFTLPALSYDYGALEPVISGQIMEIHHSKHHNT--------YVTNLNAAVETLEQATAAGDVTAIVAAQGAIKFNGGGHLNHSIFWENLAPPSEGGGAPPTGALAAAIDAEFGGVDAMKTKLSAMTVGVQGSGWGWLGYNKATGKLALATCPNQ 167          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: A0A7S3EZA5_9EUKA (Superoxide dismutase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EZA5_9EUKA)

HSP 1 Score: 191 bits (485), Expect = 2.400e-58
Identity = 89/152 (58.55%), Postives = 109/152 (71.71%), Query Frame = 0
Query:   29 TLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            TLP+L YDY  LEP +SGEIM IHHTKHHQ         Y+ NLNAA EKL +A+ KGD+ A + LQGAIKFNGGGH+NHSIFW+NL P   GGG++  GPL E I  ++GS+  L  K ++   A+QGSGWGWLG+DK   ++ IATCANQ
Sbjct:   30 TLPDLPYDYAALEPVVSGEIMTIHHTKHHQT--------YVTNLNAAYEKLLDAQAKGDIDAAIALQGAIKFNGGGHVNHSIFWQNLCPVSMGGGQLQDGPLKEAIMAEFGSLEALQAKFNATTAAIQGSGWGWLGFDKAAGKIKIATCANQ 173          
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Match: F4QFT0_CAVFA (Superoxide dismutase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QFT0_CAVFA)

HSP 1 Score: 189 bits (481), Expect = 1.950e-57
Identity = 94/166 (56.63%), Postives = 118/166 (71.08%), Query Frame = 0
Query:   15 VRLLSSSTTARAPATLPELNYDYGELEPAISGEIMKIHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKFNGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSSAAVAVQGSGWGWLGYDKVNKRLAIATCANQ 180
            VR   S++T+    TLP+L YDY  LEP I+GEIM+IHH KHHQA        Y+ NLNA+LEK A AE   DV A++ LQ AIKFNGGGH+NHSIFW NLAP+   GG    GPL++ I +Q+GS+ +  EK ++  VA+QGSGWGWLGYDK N +L I++CANQ
Sbjct:   15 VRYYGSTSTSY---TLPDLPYDYKALEPVIAGEIMEIHHKKHHQA--------YVTNLNASLEKYAAAESAKDVAAMIGLQSAIKFNGGGHVNHSIFWTNLAPKNAQGGVSPSGPLADAINQQFGSLEKFIEKFNAQTVAIQGSGWGWLGYDKANSKLVISSCANQ 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14468.3071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ23_ECTSI8.460e-9178.21Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YN63_9STRA2.820e-6564.12Superoxide dismutase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2D386_9STRA2.640e-6357.78Superoxide dismutase n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SP93_9STRA1.950e-6258.64Superoxide dismutase n=1 Tax=Rhizochromulina marin... [more]
A0A7S4M2S9_9EUKA1.060e-6055.43Superoxide dismutase n=1 Tax=Prymnesium polylepis ... [more]
A0A151ZF37_9MYCE4.170e-6057.86Superoxide dismutase n=1 Tax=Tieghemostelium lacte... [more]
C1BRR0_CALRO1.790e-5956.29Superoxide dismutase n=2 Tax=Caligus rogercresseyi... [more]
F0YBC5_AURAN1.450e-5856.55Superoxide dismutase n=1 Tax=Aureococcus anophagef... [more]
A0A7S3EZA5_9EUKA2.400e-5858.55Superoxide dismutase n=1 Tax=Haptolina ericina Tax... [more]
F4QFT0_CAVFA1.950e-5756.63Superoxide dismutase n=1 Tax=Cavenderia fasciculat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001189Manganese/iron superoxide dismutasePRINTSPR01703MNSODISMTASEcoord: 31..42
score: 57.45
coord: 99..112
score: 61.01
coord: 155..163
score: 71.31
coord: 52..65
score: 38.78
IPR001189Manganese/iron superoxide dismutasePIRSFPIRSF000349MnSOD_FeSODcoord: 1..183
e-value: 1.9E-46
score: 156.1
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyGENE3D1.10.287.990coord: 45..116
e-value: 1.3E-23
score: 85.4
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilySUPERFAMILY46609Fe,Mn superoxide dismutase (SOD), N-terminal domaincoord: 21..117
IPR019832Manganese/iron superoxide dismutase, C-terminalPFAMPF02777Sod_Fe_Ccoord: 128..181
e-value: 1.3E-10
score: 41.3
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyGENE3D2.40.500.20coord: 117..183
e-value: 2.1E-13
score: 52.2
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilySUPERFAMILY54719Fe,Mn superoxide dismutase (SOD), C-terminal domaincoord: 120..180
IPR019831Manganese/iron superoxide dismutase, N-terminalPFAMPF00081Sod_Fe_Ncoord: 29..116
e-value: 2.2E-27
score: 95.3
NoneNo IPR availablePANTHERPTHR11404:SF6SUPEROXIDE DISMUTASE [MN], MITOCHONDRIALcoord: 28..181
NoneNo IPR availablePANTHERPTHR11404SUPEROXIDE DISMUTASE 2coord: 28..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14468contigH-elongata_contig14468:4305..7848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14468.3071.1mRNA_H-elongata_contig14468.3071.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14468 4305..7848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14468.3071.1 ID=prot_H-elongata_contig14468.3071.1|Name=mRNA_H-elongata_contig14468.3071.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
MRRVACNASRRASMVRLLSSSTTARAPATLPELNYDYGELEPAISGEIMK
IHHTKHHQATMHDKEPAYINNLNAALEKLAEAEDKGDVTAIVQLQGAIKF
NGGGHLNHSIFWKNLAPECKGGGKMVPGPLSEMIEEQYGSVGELTEKLSS
AAVAVQGSGWGWLGYDKVNKRLAIATCANQVSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001189Mn/Fe_SOD
IPR036324Mn/Fe_SOD_N_sf
IPR019832Mn/Fe_SOD_C
IPR036314SOD_C_sf
IPR019831Mn/Fe_SOD_N