prot_H-elongata_contig103611.301.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig103611.301.1
Unique Name	prot_H-elongata_contig103611.301.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	99

Homology

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 6.520e-49
Identity = 79/99 (79.80%), Postives = 89/99 (89.90%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVWG 99
            MD+S + FDE +A+NTRAPLLVSQVCL+GMIK K  KIVNITSQSAVIA K H+ YCASKAAMDGL++GLVCDL+QHNIQVNNIAPTVAWSDMG+K WG
Sbjct:  190 MDISSDTFDEVIAINTRAPLLVSQVCLQGMIKNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVCDLAQHNIQVNNIAPTVAWSDMGIKTWG 288

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: A0A832EU15_9RHOB (Glucose 1-dehydrogenase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A832EU15_9RHOB)

HSP 1 Score: 106 bits (265), Expect = 2.790e-26
Identity = 50/98 (51.02%), Postives = 72/98 (73.47%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVW 98
            +D+SV+D+DET+AVN RAP ++SQV   GMI+++  KI+NI+SQ+ VIA+ DH+ Y  SK A++ L   L+ + + HNIQVN I PTV  + MG +VW
Sbjct:  106 VDLSVDDWDETMAVNVRAPFVLSQVLAPGMIERRQGKIINISSQTGVIALADHAAYATSKGALNALTKSLMAEWAPHNIQVNAICPTVVLTPMGREVW 203

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: UPI000D3E5D78 (glucose 1-dehydrogenase n=1 Tax=Acuticoccus kandeliae TaxID=2073160 RepID=UPI000D3E5D78)

HSP 1 Score: 106 bits (264), Expect = 3.930e-26
Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVW 98
            MD++VED+D T+AVN RAP L+++    GMI Q++ KIVNI+SQ+ VIA+ +H+ Y ASK A++ L   L  + +QHN+QVN I PTV  + MG +VW
Sbjct:  106 MDLTVEDWDLTMAVNVRAPFLLARALAPGMIAQRWGKIVNISSQTGVIALPEHAAYAASKGALNALTKSLTAEWAQHNVQVNAICPTVVMTPMGKQVW 203

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: A0A8I1LNS6_9RHOB (SDR family oxidoreductase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A8I1LNS6_9RHOB)

HSP 1 Score: 105 bits (261), Expect = 9.690e-26
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVW 98
            +++SV D+D T+A+N RAP L+S+    GMI +K  KIVNI+SQ+ VIA+ DH+ Y ASK  ++ L   L+ +L+ HN+QVN I PTV  ++MG K+W
Sbjct:  100 IELSVADWDRTMAINLRAPFLLSRALAPGMIARKQGKIVNISSQTGVIAIPDHAAYAASKGGLNALTKSLMTELAPHNVQVNAICPTVVMTEMGQKIW 197

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: A0A1G6A723_9HYPH (NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family n=1 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6A723_9HYPH)

HSP 1 Score: 105 bits (261), Expect = 1.100e-25
Identity = 47/98 (47.96%), Postives = 69/98 (70.41%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVW 98
            ++ +VE +D T AVNTRAP L++Q     MI QK+ KI+N++SQ+  +A+ DH+ Y ASK A++ L   L C+ ++HNIQVN I PTV  + MG++VW
Sbjct:  106 LETTVEHWDHTFAVNTRAPFLLAQALAPQMIAQKWGKIINVSSQTGPLAIDDHAAYAASKGALNALTKSLTCEWAKHNIQVNAICPTVVMTPMGIRVW 203

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: A0A7W0MMG9_9RHOB (SDR family oxidoreductase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A7W0MMG9_9RHOB)

HSP 1 Score: 102 bits (254), Expect = 1.210e-24
Identity = 47/99 (47.47%), Postives = 70/99 (70.71%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVWG 99
            ++++VED+D  +AVN RAP L++Q    GMI Q++ KIVNI+SQ+ VIA+ DH+ Y +SK  ++ L   L+ + ++HN+QVN I PTV  + MG  VWG
Sbjct:  106 LEMAVEDWDAIMAVNLRAPFLLAQALAPGMIAQRWGKIVNISSQTGVIALDDHAAYASSKGGLNALTKSLMAEWARHNVQVNAICPTVVMTPMGRAVWG 204

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: A0A7C5IVK0_9HYPH (Glucose 1-dehydrogenase n=1 Tax=Devosia sp. TaxID=1871048 RepID=A0A7C5IVK0_9HYPH)

HSP 1 Score: 102 bits (253), Expect = 1.700e-24
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVW 98
            +D+++E +D T+AVN RAP L+SQ     MI Q++ KI+NI+SQ+ VIA+KDH+ Y  SK A++ L   L+ + ++HNIQVN I PTV  + MG ++W
Sbjct:  106 LDLTLEQWDRTMAVNLRAPFLLSQALAPKMIAQRWGKIINISSQTGVIALKDHAAYATSKGALNALTKSLMAEWAEHNIQVNAICPTVVLTPMGKELW 203

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: V7ENK8_9RHOB (Short-chain dehydrogenase n=5 Tax=Rhodobacteraceae TaxID=31989 RepID=V7ENK8_9RHOB)

HSP 1 Score: 100 bits (248), Expect = 9.380e-24
Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = 0

Query:    2 DVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVWG 99
            D+++ D+DET+AVN RAP L++Q     MI Q++ K++NI+SQ+ VIA+ DH+ Y  SK A++ L   L  + ++HN+QVN I PTV  + MG  VWG
Sbjct:  107 DLTLADWDETMAVNVRAPFLLAQALGPAMIAQRWGKVINISSQTGVIALDDHAAYATSKGALNALTKSLCAEWARHNVQVNAICPTVILTPMGKAVWG 204

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: UPI001F1AC034 (glucose 1-dehydrogenase n=1 Tax=Acuticoccus sp. M5D2P5 TaxID=2910977 RepID=UPI001F1AC034)

HSP 1 Score: 99.4 bits (246), Expect = 1.860e-23
Identity = 47/99 (47.47%), Postives = 70/99 (70.71%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVWG 99
            ++++ ED+D ++AVN RAP L+S+     MI Q+  KIVNI+SQ+ VIA+ DH+ Y +SK A++ L   L+ + ++HNIQVN I PTV  + MG +VWG
Sbjct:  106 LELTAEDWDLSMAVNVRAPFLLSRALAPAMIAQRSGKIVNISSQTGVIALDDHAAYASSKGALNALTKSLMAEWARHNIQVNAICPTVVLTPMGKEVWG 204

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BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Match: A0A7X3YXG8_9RHOB (SDR family oxidoreductase n=2 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A7X3YXG8_9RHOB)

HSP 1 Score: 99.0 bits (245), Expect = 2.320e-23
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 0

Query:    1 MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAVKDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVW 98
            +D S ED+D T+A+N RAP L+++    GMI  K  KI+NI+SQ+ VIA+ +H  Y  SK  ++ L   L+ +L+ HNIQVN I PTV  ++MG KVW
Sbjct:  100 LDYSAEDWDRTMAINLRAPFLLAKGLAPGMIAAKAGKIINISSQTGVIALAEHVAYATSKGGLNALTKSLMVELAPHNIQVNAICPTVVMTEMGKKVW 197

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot

BLAST of mRNA_H-elongata_contig103611.301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSQ4_ECTSI	6.520e-49	79.80	Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec...	[more]
A0A832EU15_9RHOB	2.790e-26	51.02	Glucose 1-dehydrogenase n=1 Tax=Rhodobacteraceae b...	[more]
UPI000D3E5D78	3.930e-26	51.02	glucose 1-dehydrogenase n=1 Tax=Acuticoccus kandel...	[more]
A0A8I1LNS6_9RHOB	9.690e-26	48.98	SDR family oxidoreductase n=1 Tax=Rhodobacteraceae...	[more]
A0A1G6A723_9HYPH	1.100e-25	47.96	NAD(P)-dependent dehydrogenase, short-chain alcoho...	[more]
A0A7W0MMG9_9RHOB	1.210e-24	47.47	SDR family oxidoreductase n=1 Tax=Rhodobacteraceae...	[more]
A0A7C5IVK0_9HYPH	1.700e-24	47.96	Glucose 1-dehydrogenase n=1 Tax=Devosia sp. TaxID=...	[more]
V7ENK8_9RHOB	9.380e-24	46.94	Short-chain dehydrogenase n=5 Tax=Rhodobacteraceae...	[more]
UPI001F1AC034	1.860e-23	47.47	glucose 1-dehydrogenase n=1 Tax=Acuticoccus sp. M5...	[more]
A0A7X3YXG8_9RHOB	2.320e-23	47.96	SDR family oxidoreductase n=2 Tax=Rhodobacteraceae...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 56..75 score: 33.38 coord: 30..46 score: 26.63 coord: 77..94 score: 31.02
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 2..93 e-value: 8.0E-23 score: 80.9
None	No IPR available	GENE3D	3.40.50.720		coord: 1..99 e-value: 2.8E-25 score: 91.0
None	No IPR available	PANTHER	PTHR44252:SF3	D-ERYTHRULOSE REDUCTASE	coord: 2..98
None	No IPR available	PANTHER	PTHR44252	FAMILY NOT NAMED	coord: 2..98
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 2..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig103611	contig	H-elongata_contig103611:64..2111 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig103611.301.1	mRNA_H-elongata_contig103611.301.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig103611 64..2111 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig103611.301.1 ID=prot_H-elongata_contig103611.301.1|Name=mRNA_H-elongata_contig103611.301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MDVSVEDFDETVAVNTRAPLLVSQVCLEGMIKQKYSKIVNITSQSAVIAV
KDHSVYCASKAAMDGLMNGLVCDLSQHNIQVNNIAPTVAWSDMGLKVWG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR036291	NAD(P)-bd_dom_sf