mRNA_H-elongata_contig14341.2990.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14341.2990.1
Unique NamemRNA_H-elongata_contig14341.2990.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 1.870e-124
Identity = 175/302 (57.95%), Postives = 219/302 (72.52%), Query Frame = 1
Query:    1 KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDYGSCEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            ++RLSKF+YFA DP  T  SEEVLL +A +   +H+ GW+GF+PSAYG  A YHD+YW+ GD   Q D  +H Q T  L GS++RISVP+DGTGYE+P+ N     L EICA GFRNPWRC FD  TDELYCG+VGH  +E I  +ECGNNYGW RFEGSRC E  E   G C D DRS++TFPI+EYCH DY S  + + ++  GVDICG R ++G  VIGGYVYRG  +AD++YGAYVF +    NI+YI+ QD+G W+ GTIISD SV V  F+ED +GEL +ID + +IY +PCGD+C
Sbjct:  201 RNRLSKFQYFAGDPAFTLASEEVLLTSAPKIGSIHSAGWVGFQPSAYGTIASYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVPADGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIYEYCHPDYSSDDADEADFVAGVDICGTRMVSGTAVIGGYVYRGTYFADVLYGAYVFGDNTSNNIYYIV-QDNGVWSVGTIISDSSVSVIGFAEDNNGELMVIDQDYNIYQLPCGDMC 501          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.070e-120
Identity = 170/304 (55.92%), Postives = 225/304 (74.01%), Query Frame = 1
Query:    1 KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDY--GSCEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            ++RL++F Y   DP+ T+ SEEVLL T  +   +H+ GWLGFKPS YG+++   DLYW+ GD GPQ D  +H+Q T  + G+++RI+VPSDG GY +PS NY G  L EICAIGFRNPWRC FD   D LYCG+VGH ++E I  +ECGNNYGW RFEGSRC E  ED+    +C+ + RS +TFP++EYCH DY ST    DE+T G DICGDR + GN VIGGYVYRG  ++DL+ GAY+F +   +NI+Y++E+D G W+ GTIISD SV++ SFSEDI+GE+ ++D  ++IY++PCGDLC
Sbjct:  265 RNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVYGNSSP-QDLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSDGDGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDYQSTGD--DEFTAGNDICGDRVLLGNAVIGGYVYRGNYFSDLLNGAYIFGDSTMKNIYYLVEED-GGWSLGTIISDASVQIISFSEDINGEIVLLDLQHNIYHMPCGDLC 564          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 1.980e-115
Identity = 164/282 (58.16%), Postives = 212/282 (75.18%), Query Frame = 1
Query:    1 KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSED-DYGS-CEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDI 840
            ++RL++F Y   DP  T+ SEEVLL +A + T +H+ GWLGFKPS YG+ A   DLYW+ GD GPQ D N+HAQ T  + G+++RI+VPSDG+GY +PS NY G  L EICAIGFRNPWRC FD  TD+LYCG+VGH ++E I  +ECGNNYGW RFEGSRC E  E+ +Y   C+ VDRS +TFP++EYCH DY  +S   DE+T GVDICGDR + GN VIGGYVYRG  ++DL+YG Y+F +   +NIFY++++ DG W+ GTIISD SV++ SF+ED+
Sbjct:  202 RNRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPSVYGN-ASPQDLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSDGSGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDY--SSVGDDEFTAGVDICGDRVLLGNAVIGGYVYRGNFFSDLLYGHYIFGDSTMKNIFYLVKEGDG-WSLGTIISDASVQIISFAEDV 479          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 1.130e-111
Identity = 160/304 (52.63%), Postives = 214/304 (70.39%), Query Frame = 1
Query:    1 KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDYGS--CEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            ++RL++F Y   DP +TR +EEVLL T  +   +H+ GWLGFKPS YG T                 D  +H+Q    + G+++RISVPSDGTGY +P  NYPGA+ +E+CAIG RNPWRCGFD L D LYCG+VGH  +E I  IECGNNYGW RFEGSRC E  +D+  +  C+ VDRS +T+P+FEYCH DY ST + + E+TGG D CGDR + GN VIGGYVYRG  ++DL+ GAY+F +   RNI+++ E++ G W  GTIISD SV++ SF+ED++GE+ ++D  + +Y++PCGDLC
Sbjct:  159 RNRLARFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYGST-----------------DPGNHSQDETTMLGAMMRISVPSDGTGYTIPPGNYPGAK-AEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADEQEFTGGADTCGDRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLREEEAG-WAVGTIISDASVQIVSFAEDVNGEIMMLDYQHRMYHMPCGDLC 443          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 2.210e-92
Identity = 155/307 (50.49%), Postives = 207/307 (67.43%), Query Frame = 1
Query:    7 RLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTAD-YHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSD--GTGYEVPSDN-YPGA--ELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSED-DYGSCEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            RLSKF Y+A D  +T  SEE+LL + E+ + +H+ GW+GF PS+Y D    YHD+YW+VGD GPQ D ++ AQ    L GSIVRISVPS   GTGYE+P+ N + GA  E  EICA G RNP RC FD+ TDELYCG+VG + +E +  IECG +YGW  FEGSRC +  E  D G C  +DR+ Y FP+FEYCH DY    SSQ+E+    D CGDR +TG +VIGG+VYRG  Y D++ G Y+FA++   ++ ++     G WT+GT++S    ++  F+E  DGEL+++    +IY +PCGDLC
Sbjct:  270 RLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDY---DSSQEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTVLS-SIPKIGGFAEGNDGELYMVGYQGNIYDLPCGDLC 568          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 3.930e-86
Identity = 140/304 (46.05%), Postives = 183/304 (60.20%), Query Frame = 1
Query:    1 KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDYGS--CEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            ++RL++F Y   D  +TR SEEVLL T  +   +H+ GWLGFKPSAYG    Y DLYW+ GD GPQ D  +H+Q                DGTGY +P  NY GA+ +EICAIG RNPWRC FD L D+LYCG+VG   +E I  IECGNNYGW RFEGSRC E  +D+  +  C+ + RS +TFP+FEYCH D+ ST + + ++TGG D CG+R                                       +E+DDG W  GTIISD S+++ SF+ED DGE+ ++D N++IY +PCG+LC
Sbjct:  120 RNRLARFTYVPGDAAATRASEEVLLTTVPKYNSVHSAGWLGFKPSAYGSPG-YQDLYWTTGDGGPQTDPFNHSQ----------------DGTGYTIPPGNYHGAK-AEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGISRSGFTFPLFEYCHPDFDSTDADEQKFTGGADTCGNR--------------------------------------FVEKDDGGWAVGTIISDASIQIISFAEDADGEIMLLDYNHNIYPMPCGNLC 367          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 8.610e-80
Identity = 135/305 (44.26%), Postives = 186/305 (60.98%), Query Frame = 1
Query:    7 RLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTA----DYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDYG-SCEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            RLS+F+Y  D   +T  SEE+L+ ++E+ + +H+ GW+GFKPS+YG+ A      H+L+W++GD+GPQ DT+D  Q  +IL GSI+RI V S               E+      G RNP+RC FD L D+LYCG+VGH  +ESI  IECGNNYGW +FEG RC +  ED +  +CE +DRS +TFP F YCH D++              ICGDR++ G  VI GYVYRG  Y DL+ G  +FA++    ++++     G W SGTI  D    V   +ED DGEL+++     I+ +PCGDLC
Sbjct:  167 RLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYGNDAVSAGAVHELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEVSS---------------EMGSGDKEGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYPVDHPS-YIVSDQSICGDRSVIGTAVIAGYVYRGAKYDDLLGGNLIFADFTLNRLYHLFPTKGGGWGSGTIKGDDFFAVSHIAEDNDGELYVVQYQGTIFEMPCGDLC 455          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 2.790e-74
Identity = 113/197 (57.36%), Postives = 152/197 (77.16%), Query Frame = 1
Query:  322 SEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDYGS--CEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            +EICAIG RNPWRC FD L D+LYCG+VG   +E I  IECGNNYGW RFEGSRC E  +D+  +  C+ VDRS +T+P+FEYCH D+ ST + + E+TGG D CG+R + GN VIGGYVYRG  ++DL+ GAY+F +   RNI+++ E++DG W  GTI+SD SV++ SF+ED++GE+ ++D N+DIY++PCGDLC
Sbjct:  289 AEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADEQEFTGGADTCGNRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLKEEEDG-WAVGTIVSDASVQIISFAEDVNGEIVLLDYNHDIYHMPCGDLC 484          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.890e-71
Identity = 116/214 (54.21%), Postives = 145/214 (67.76%), Query Frame = 1
Query:    1 KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDYGS--CEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGD 636
            ++RL++F Y   D  +TR SEEVLL T  R   +H  GWLGFKPSAYG+   Y DLYW+ GD GPQ D  +H+Q    + G+++RISVP+DGTGY +P  NY G++ +EICAIG RNPWRC FD L D+LYCG+VG    E I  +ECGNNYGW RFEGSRC E  +D+  +  C+ VDRS +TFP+FEYCH D+ ST           DIC D
Sbjct:  193 RNRLARFTYVPGDAAATRASEEVLLTTVPRFISVHAAGWLGFKPSAYGNPG-YQDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPPGNYHGSK-AEICAIGLRNPWRCSFDRLNDDLYCGDVGQISAEEINLVECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTFPLFEYCHPDFDST-----------DICAD 393          
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.320e-59
Identity = 114/302 (37.75%), Postives = 156/302 (51.66%), Query Frame = 1
Query:    1 KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDTADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSDNYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGNNYGWVRFEGSRCTEYSEDDYGSCEDVDRSSYTFPIFEYCHYDYFSTSSSQDEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIFYILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGDLC 906
            ++RL+KF YF +DP +TR SEEVLL T  +   +H+ GWLGFKPS YG+   Y DLYW+ GD GPQ D  +H+Q    + G+++RISVP+DGTGY +PS NYPGA+ +E+CAIG RNPWRCGFD L D+LYCG+VGH  +E I  IE                                                                                                    NI+++ E++DG W  GTIISD SV++ SF+ED++GE+ ++D  +++Y++PCGDLC
Sbjct:  219 RNRLAKFTYFPEDPVATRASEEVLLTTVPKYNSIHSAGWLGFKPSDYGNPG-YSDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPSGNYPGAK-AEVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIE----------------------------------------------------------------------------------------------------NIYFLREEEDG-WAVGTIISDASVQIVSFAEDVNGEIMLLDYQHNMYHMPCGDLC 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14341.2990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6T7_ECTSI1.870e-12457.95WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4P3_ECTSI1.070e-12055.92Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5JZF5_9PHAE1.980e-11558.16GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KT40_9PHAE1.130e-11152.63GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FJP1_ECTSI2.210e-9250.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G960_ECTSI3.930e-8646.05Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5KS07_9PHAE8.610e-8044.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G961_ECTSI2.790e-7457.36Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G962_ECTSI1.890e-7154.21GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G957_ECTSI1.320e-5937.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14341contigH-elongata_contig14341:27..3818 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.5
Seed ortholog evalue1.8e-103
Seed eggNOG ortholog2880.D7G6T7
KEGG rclassRC00194
KEGG koko:K04618,ko:K08254,ko:K11244,ko:K20929
KEGG ReactionR01098
KEGG Pathwayko00052,ko04011,ko04139,map00052,map04011,map04139
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC1.1.3.9,1.2.3.15,3.2.1.59
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons7
Model size906
Cds size906
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929850.4039505-CDS-H-elongata_contig14341:26..891622929850.4039505-CDS-H-elongata_contig14341:26..89Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 27..89 -
1691679182.7419481-CDS-H-elongata_contig14341:26..891691679182.7419481-CDS-H-elongata_contig14341:26..89Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 27..89 -
1622929850.4271834-CDS-H-elongata_contig14341:354..4571622929850.4271834-CDS-H-elongata_contig14341:354..457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 355..457 -
1691679182.754443-CDS-H-elongata_contig14341:354..4571691679182.754443-CDS-H-elongata_contig14341:354..457Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 355..457 -
1622929850.4409292-CDS-H-elongata_contig14341:810..8861622929850.4409292-CDS-H-elongata_contig14341:810..886Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 811..886 -
1691679182.7632573-CDS-H-elongata_contig14341:810..8861691679182.7632573-CDS-H-elongata_contig14341:810..886Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 811..886 -
1622929850.4540083-CDS-H-elongata_contig14341:1123..13471622929850.4540083-CDS-H-elongata_contig14341:1123..1347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 1124..1347 -
1691679182.7728531-CDS-H-elongata_contig14341:1123..13471691679182.7728531-CDS-H-elongata_contig14341:1123..1347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 1124..1347 -
1622929850.4693701-CDS-H-elongata_contig14341:1465..15891622929850.4693701-CDS-H-elongata_contig14341:1465..1589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 1466..1589 -
1691679182.7820938-CDS-H-elongata_contig14341:1465..15891691679182.7820938-CDS-H-elongata_contig14341:1465..1589Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 1466..1589 -
1622929850.4812202-CDS-H-elongata_contig14341:2234..24001622929850.4812202-CDS-H-elongata_contig14341:2234..2400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 2235..2400 -
1691679182.7947133-CDS-H-elongata_contig14341:2234..24001691679182.7947133-CDS-H-elongata_contig14341:2234..2400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 2235..2400 -
1622929850.5031424-CDS-H-elongata_contig14341:3668..38181622929850.5031424-CDS-H-elongata_contig14341:3668..3818Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 3669..3818 -
1691679182.8089767-CDS-H-elongata_contig14341:3668..38181691679182.8089767-CDS-H-elongata_contig14341:3668..3818Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14341 3669..3818 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14341.2990.1prot_H-elongata_contig14341.2990.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14341 27..3818 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14341.2990.1

>prot_H-elongata_contig14341.2990.1 ID=prot_H-elongata_contig14341.2990.1|Name=mRNA_H-elongata_contig14341.2990.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=302bp
KSRLSKFEYFADDPDSTRDSEEVLLETAERPTYMHNGGWLGFKPSAYGDT
ADYHDLYWSVGDAGPQKDTNDHAQRTDILFGSIVRISVPSDGTGYEVPSD
NYPGAELSEICAIGFRNPWRCGFDSLTDELYCGNVGHNYIESIYNIECGN
NYGWVRFEGSRCTEYSEDDYGSCEDVDRSSYTFPIFEYCHYDYFSTSSSQ
DEYTGGVDICGDRNITGNTVIGGYVYRGQAYADLIYGAYVFAEYEGRNIF
YILEQDDGAWTSGTIISDGSVRVYSFSEDIDGELFIIDDNNDIYYVPCGD
LC
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mRNA from alignment at H-elongata_contig14341:27..3818-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14341.2990.1 ID=mRNA_H-elongata_contig14341.2990.1|Name=mRNA_H-elongata_contig14341.2990.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3792bp|location=Sequence derived from alignment at H-elongata_contig14341:27..3818- (Himanthalia elongata Himel1 dioecious)
AAAAGCCGCCTGTCAAAGTTCGAGTACTTCGCTGACGATCCGGATTCAAC CCGTGACAGCGAGGAGGTGCTCCTAGAAACCGCCGAAAGACCAACATACA TGCACAACGGGGGTTGGCTTGGCTTCAAGCCCAGCGCCTACGGTGACACG GTGAGTTCATGATGGCGCGACCGGTTTTGAGTGAAGTGATTTTTTATAAA TATTATTAATCTCAGAATAAATATGCAGCTGGGCACTGAACCAGTCTCAT ATCAGTGACACTGAGGAGGTTTAGCGATCTAATACCATGGTTACCACATA CTACCCCCTATAAGTTTTAAAAACGTTTAGTTCTCAAAATCCATTGCCGA GAGAGCCATTCAGTGCAGTGATGCTGACCATACAATGCCAGGATACTTAT CCTGGGCTATTCCCAAGTGACGATGACGTAGGGGCGTCACGATGCACGGA CTACCTACTTCCTCCCCTGTACAACGGCACAATATATGTGCCAATCCAGT GGATTACTTCGTTTGAAATCATTGTAGCAAAATAAGAATTACCTGTGGAT TGAACACGGAGTAAAATAAGAGTGCACACATGGTGGGGCGGTTATCCTAT TTCGTTTAACATTTGCCATGGTTTCGTGGTTCTGCTTGTCACAACGCTCT CCTGGCCACCGGATAATATGCAGGTGACGCGAGAGGTAGCTAGTCGGTAC CATGCTATAATCAATCGTGGTGTCCTTCTGACGATGCACTCTAAAGTATC TATTTTTTGTTTTTGCGCGTCACCTTCCGCACATATTTCATCCGCCAACC CATAAGGGTATCAGGGAAGGATTATCAAAACTCGCTATCATTCCTCTATC TGTCTGGTTATTCGTGCTCAAACTGAGCCCCGCTGGGTTTATCTCTGGGC CTCTTTCTTGAAAAATAATGCGCGAATCTTACCCTCTTTCTGACAAGAAT TGATGTTTGTATTCGTCGAATACAGCACTGCATACGTACGGGGGGACAAC GTAGGAATATAATGAAATAATTGTAAGTAGTGTTCGATCGTGTGTGTACT ATGAACAGTCAGCGATGGGGTCTAACCTCAACGCAATCATTTGGGCAGAA TTAAAGTAAGAAGTGCTGTAAGAGTCCAGAGGTATACTAGTGACGGGTCA ATATATTATCTGGTCGGCTCACTTGGACTAGTATTAGTGGTGAGGATTTT GGATTAGATAAATATGAAAACCGGGGTATATTTTCCCCGTCCCAGCTCAA GTCAAAAGTGCGCAACCTTTCCCTACCAGCATTCATAATTATATCTTTGA GCTTTCGCATCGCGGCAAGAGGTCATCACCAAATTGTGTAGAAATACCTG CGAAATTGCTCCGCATCTTAAATCTCCGTCGCGCCTTTCCTCCTCATACA CCCCAAACAATACCGCAGGCCGACTACCATGATCTGTACTGGTCCGTAGG AGACGCAGGGCCGCAAAAAGACACAAACGACCACGCCCAGCGCACCGACA TCCTTTTCGGGTCTATTGTGCGGATTTCGGTTCCATCGGACGGCACAGGC TACGAAGTTCCAAGTGACAACTACCCGGGCGCAGGTAGTGGACCCTCGAC GGGCGCGTTATTTGTGCCCAAGATGCGTGTCTCGTTCGTTACAAACGGGC TTCGGCCTAAAGACCCTCTCATATTGTTTTGAGATTGGCCAGGAGATTGT TTTGGGGCTGTCCTCTGCAATACAGAATAATTGCAAAGCTTGGCTCGGAT TTATCACCTTCCCATCATCGACGAATTACTTCATGTTGTCATGAGCTTCA CATCATCCCACACCAGACATTCATGTTGGCTGAACGTGAAAGATTACCAC ATTCGCCTCATAAATGTGATTCTGGCCGTACCTTTTTCTAGATCGCCGTG AAAGTACGTCAACCTTCCATAAAATTGAAATGATGTCCAAATAATGAAGT AAGGTGGAATATCCGGGCCTGAGAAGGTGCTTACAAAGACACCAAACAGT TTACAACACAACTCTAGGTTCAATATTGTAGTAGAGATATTGCCTGTTAT CCTTACCGACCCAAGAGACGTTCAAAAAGGCACCGACTGGGAAATAACAG CAGCATATACCTCCTCGGAGGATGATATTCATTTTTAAAAGTGAGAGACA TCCGGAGAGTGCACTCTATGACTACAAACATGTATTCAATTTCACTGACT CCTGCATGTACGCTTCCGACAACCGGTAGAATTGTCCGAGATCTGCGCCA TAGGTTTCCGTAACCCCTGGAGGTGTGGCTTTGACAGTCTTACCGATGAG CTCTACTGCGGGAATGTCGGTCACAATTACATCGAGAGCATCTACAACAT CGAGTGAGTAACAACACATGAAGTTTTATTTCAACGCTCTATGCCTCACT AGTTCACTGTGTCTTACGATGGCCCCTGCCTAACTCTAAACTACACGGAT GGATTACAAACCCCTTGGCAGATGCGGAAACAACTACGGTTGGGTGCGGT TTGAGGGATCGCGATGCACAGAGTATTCTGAAGACGATTATGGCTCGTGC GAGGATGTTGACCGATCGAGCTACACCTTCCCAATCTTTGAGTACTGCCA CTACGACTATTTTTCTACCTCATCTTCCCAAGACGAGTACACGGGTGGTG TCGACATATGTGGGGACAGGAATATTACCGGTAACACAGTCATTGGTGAG TGTACCGCTTAGTTGCCTAACTCGGGAGGGGGAAAGAGGTGGGCCATTCT AGGCTCATTTTCCCAGGCAGTGGCTCTACTATATACTAGAACCAGGAGGT GACTGAAACGAAGAAATGAGTTTCGCCGTACATGTTCATGTGTGTTACAG TAATGAGATGAGGCAAAATAATGATATTACTTCCGCCCTCGCCAGATCAT TTTCCTGTCCATTTTTCGCTCACATCATTCAGGAGGATACGTGTACAGAG GACAAGCGTACGCTGACCTAATATACGGGGCTTACGTATTCGCTGAGTAC GAGGGCAGGTCAGTGGCAGCCATTTCTAAACACCTGTAAATACCAACTAA ATCTCTACAAGCGCGACTTACGTCGTCTGCCGGTGCTCACTACTATCATT GATGGTCGTCACGCCACCGTCGTCACGAATTTCCCGCAGATCAGGCGCTT TTATGAGTTGCCGCTGGAAGACACATGTTTTCGTCTGTATTGATATTTGT TTGCGGATGCTGCTCGGGAAGGGGAAATGCCCCACTCGGGGGCTAGCTTA ATACGTTTCCCAAAAGTTTTATGGCCTTTTTTTTTATCGCAAGCGATTAC TAATTGAGCAACGTCCAACTTGTACGTCGCTTGCTTCTTCACTCCAAATT GCACGAGCCAGAAACATTTTCTACATTCTGGAACAGGACGACGGAGCATG GACGTCGGGCACTATCATTAGCGACGGAAGTGTACGTGTCTACTCCTTCT CCGAGGACATCGACGTGAGCAAGGGATACGCTTTGTGTACCCCATTATAT GCCACAGTGGGTCTCATTTTGCTTACCAGCCAAATCATGCGTGGTAGTGC AATATGGCAAAGGAGCTTATTATCCTGAATTTATAGACGTGTAATACAGT ACACAATCTTACATATATCCCATAGGCGTCCACGTATGTCTCATTGTCCC TCACGTGTGCTAGAACGACCCTCGCTATTCCTTCATACTGCATTTCATAC TTTTACGGATTTTTGATCCGGCGTTTCAGGGGGAGTTATTTATAATCGAC GACAACAATGACATATATTATGTGCCCTGCGGTGATCTCTGC
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Coding sequence (CDS) from alignment at H-elongata_contig14341:27..3818-

>mRNA_H-elongata_contig14341.2990.1 ID=mRNA_H-elongata_contig14341.2990.1|Name=mRNA_H-elongata_contig14341.2990.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1812bp|location=Sequence derived from alignment at H-elongata_contig14341:27..3818- (Himanthalia elongata Himel1 dioecious)
AAAAGCCGCCTGTCAAAGTTCGAGTACTTCGCTGACGATCCGGATTCAAC
CCGTGACAGCGAGGAGGTGCTCCTAGAAACCGCCGAAAGACCAACATACA
TGCACAACGGGGGTTGGCTTGGCTTCAAGCCCAGCGCCTACGGTGACACG
AAAAGCCGCCTGTCAAAGTTCGAGTACTTCGCTGACGATCCGGATTCAAC
CCGTGACAGCGAGGAGGTGCTCCTAGAAACCGCCGAAAGACCAACATACA
TGCACAACGGGGGTTGGCTTGGCTTCAAGCCCAGCGCCTACGGTGACACG
GCCGACTACCATGATCTGTACTGGTCCGTAGGAGACGCAGGGCCGCAAAA
AGACACAAACGACCACGCCCAGCGCACCGACATCCTTTTCGGGTCTATTG
TGCGGATTTCGGTTCCATCGGACGGCACAGGCTACGAAGTTCCAAGTGAC
AACTACCCGGGCGCAGGCCGACTACCATGATCTGTACTGGTCCGTAGGAG
ACGCAGGGCCGCAAAAAGACACAAACGACCACGCCCAGCGCACCGACATC
CTTTTCGGGTCTATTGTGCGGATTTCGGTTCCATCGGACGGCACAGGCTA
CGAAGTTCCAAGTGACAACTACCCGGGCGCAGAATTGTCCGAGATCTGCG
CCATAGGTTTCCGTAACCCCTGGAGGTGTGGCTTTGACAGTCTTACCGAT
GAGCTCTACTGCGGGAATGTCGGTCACAATTACATCGAGAGCATCTACAA
CATCGAAATTGTCCGAGATCTGCGCCATAGGTTTCCGTAACCCCTGGAGG
TGTGGCTTTGACAGTCTTACCGATGAGCTCTACTGCGGGAATGTCGGTCA
CAATTACATCGAGAGCATCTACAACATCGAATGCGGAAACAACTACGGTT
GGGTGCGGTTTGAGGGATCGCGATGCACAGAGTATTCTGAAGACGATTAT
GGCTCGTGCGAGGATGTTGACCGATCGAGCTACACCTTCCCAATCTTTGA
GTACTGCCACTACGACTATTTTTCTACCTCATCTTCCCAAGACGAGTACA
CGGGTGGTGTCGACATATGTGGGGACAGGAATATTACCGGTAACACAGTC
ATTGATGCGGAAACAACTACGGTTGGGTGCGGTTTGAGGGATCGCGATGC
ACAGAGTATTCTGAAGACGATTATGGCTCGTGCGAGGATGTTGACCGATC
GAGCTACACCTTCCCAATCTTTGAGTACTGCCACTACGACTATTTTTCTA
CCTCATCTTCCCAAGACGAGTACACGGGTGGTGTCGACATATGTGGGGAC
AGGAATATTACCGGTAACACAGTCATTGGAGGATACGTGTACAGAGGACA
AGCGTACGCTGACCTAATATACGGGGCTTACGTATTCGCTGAGTACGAGG
GCAGGAGGATACGTGTACAGAGGACAAGCGTACGCTGACCTAATATACGG
GGCTTACGTATTCGCTGAGTACGAGGGCAGAAACATTTTCTACATTCTGG
AACAGGACGACGGAGCATGGACGTCGGGCACTATCATTAGCGACGGAAGT
GTACGTGTCTACTCCTTCTCCGAGGACATCGACAAACATTTTCTACATTC
TGGAACAGGACGACGGAGCATGGACGTCGGGCACTATCATTAGCGACGGA
AGTGTACGTGTCTACTCCTTCTCCGAGGACATCGACGGGGAGTTATTTAT
AATCGACGACAACAATGACATATATTATGTGCCCTGCGGTGATCTCTGCG
GGGAGTTATTTATAATCGACGACAACAATGACATATATTATGTGCCCTGC
GGTGATCTCTGC
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