prot_H-elongata_contig100233.29.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100233.29.1
Unique Nameprot_H-elongata_contig100233.29.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length449
Homology
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A6H5KC98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC98_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 3.530e-102
Identity = 186/302 (61.59%), Postives = 201/302 (66.56%), Query Frame = 0
Query:    2 YANASHALAKLGVPVALPGGGRGAAPQQLHLQQTVQQLQATQHLATHRA-------------FNGGDRGSLPAATGSRRASTAVSKEAASCLPPCFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDI----HWGGRHG----GNERELGGNR------------SRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            Y N SHA AKLG+PVALP GGRGAAPQQLHLQQT+QQLQATQ+                                          + AA   PPCF+C +D+THWG NAGNGEAI CARDGC RVFHVTCVA+LL+DAAA TPGG GA AGTWECP+H CA CG DENGLQLG       AG +       GR G    G  R+ G               SRRLWQCTWCSVAFC+ HLP QLATAGRKARVADANQCVHCRSPSPRVKLAILLE MCSR+ANHHLAIPFLRPF+PGIASP
Sbjct:  465 YTNPSHAFAKLGIPVALPEGGRGAAPQQLHLQQTMQQLQATQNFGATATPQQQRHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRXAAELPPPCFICKDDITHWGPNAGNGEAISCARDGCGRVFHVTCVAYLLQDAAARTPGGCGAEAGTWECPLHRCACCGADENGLQLGEKKDISNAGLVVLAPPLAGRSGVSGVGGWRKSGXXXXXXXXXXXXXAGSRRLWQCTWCSVAFCMKHLPSQLATAGRKARVADANQCVHCRSPSPRVKLAILLEGMCSRIANHHLAIPFLRPFMPGIASP 766          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: D8LPU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPU7_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 2.970e-88
Identity = 150/216 (69.44%), Postives = 163/216 (75.46%), Query Frame = 0
Query:   81 PPCFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDI----HWGGRHG----GNERELGGNR------------SRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASPLKNEED 276
            PPCF+C +D+THWG NAGNGEAI CARDGC RVFHVTCVA+LL+DAAA TPGG GA AGTWECP+H CA CG DENGLQLG       AG +       GR G    G  R+ G               SRRLWQCTWCSVAFC+ HLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLE MCSR+ANHHLAIPFLRPF+PGIASP  ++ D
Sbjct:  433 PPCFICKDDITHWGPNAGNGEAISCARDGCGRVFHVTCVAYLLQDAAARTPGGCGAEAGTWECPLHRCACCGADENGLQLGEKKDSSNAGLVVLASPLSGRSGVSGVGGWRKSGXXXXXXXXXXXXXXGSRRLWQCTWCSVAFCMKHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEGMCSRIANHHLAIPFLRPFMPGIASPFGDDND 648          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A7S2GUQ6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUQ6_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.750e-11
Identity = 61/230 (26.52%), Postives = 93/230 (40.43%), Query Frame = 0
Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGS----GAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLPPQL--------------------------------ATAGRKARVADAN----QCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPG--IASP 270
            C +CG            GE + C    C +VFH  CV       ++  P G     G   G W CP H+C  C        L + +R                      ++  +L++C+ C++++C  H+P +L                                ++A  K R A  +    +CV+C+ P  R  LA LLE   +R+ANH+LA+PFLRP+L G  +ASP
Sbjct:   48 CMVCG----------CQGELMLCDYPDCQKVFHKACVWP-----SSLGPAGGLSIDGRTTGEWICPRHYCCIC--------LSSESRD---------------------DQDFQLYKCSDCTISYCEHHVPDELIPGLNKGSGLDNNKATLRNSQTQACSHSHSQCSSAAEKTRAAGRSSEKFKCVYCKEPKARTILARLLESAWARMANHYLALPFLRPYLSGHQMASP 233          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A7S2SAQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAQ8_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.680e-8
Identity = 56/196 (28.57%), Postives = 78/196 (39.80%), Query Frame = 0
Query:   72 VSKEAASCLPP---CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFL 264
            V+K A+   P    C +C           G G  + C   GC +VFH  C   L     +  P  S  A   W C  H CA CG +E+           PA                         +C  C+++FC  H    +   G   R +   +C  C + SPRV LA +L +  + +ANH+LA+PFLRP L
Sbjct:  230 VNKTASEATPSEESCALC----------CGTGTLLVCDFPGCPKVFHRMCAWPL-----SILPVESPDA--PWFCQRHTCAICGAEED-----------PALPFD---------------------KCETCTISFCAEHRLQGIPEGGALGRPSSRFRCPCCDADSPRVGLAKILFQAWATIANHYLALPFLRPLL 376          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A397FHH6_9STRA (PHD domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FHH6_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.990e-8
Identity = 50/190 (26.32%), Postives = 72/190 (37.89%), Query Frame = 0
Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P
Sbjct:   39 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WICPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRP 178          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A3L6VEF1_9STRA (PHD-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VEF1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.330e-7
Identity = 50/190 (26.32%), Postives = 72/190 (37.89%), Query Frame = 0
Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P
Sbjct:  189 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WVCPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRP 328          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A6G0X3E3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3E3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.610e-7
Identity = 50/188 (26.60%), Postives = 70/188 (37.23%), Query Frame = 0
Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  EN +                               S+ +W C  C +    S LP   A + R ++      C HC +PSPRV+LA LLE++ S +A +   +PF  P L G+  P
Sbjct:  265 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAYPFPMDEETE---------WICPRHTCVISGRKENPMST---------------------------QTSKTMWHCLNCPIGVETSILPTHSALS-RHSKRDKTIICPHCNAPSPRVRLAKLLERIWSIVATNRQGMPFCGPLLVGVDRP 405          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A397DEQ7_9STRA (PHD-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DEQ7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.890e-7
Identity = 53/197 (26.90%), Postives = 75/197 (38.07%), Query Frame = 0
Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASPLKNEEDP 277
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P   E DP
Sbjct:  199 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WICPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRPA--EMDP 343          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A3R7E4K7_9STRA (PHD-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7E4K7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.020e-7
Identity = 53/197 (26.90%), Postives = 75/197 (38.07%), Query Frame = 0
Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASPLKNEEDP 277
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P   E DP
Sbjct:  464 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WICPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRPA--EMDP 608          
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Match: A0A6A4ZHF3_9STRA (PHD-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZHF3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.090e-7
Identity = 50/190 (26.32%), Postives = 72/190 (37.89%), Query Frame = 0
Query:   83 CFMCGEDVTHWGMNAGNGEAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCARCGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCSVAFCLSHLP--PQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRLANHHLAIPFLRPFLPGIASP 270
            CF+CG            GE + C    C +V+H  C+          T          W CP H C   G  E  +Q                              ++ +W C  C VA   + LP  P L+   R+ +      C HC +PSP+V+LA +LE++ S +A +   +PF  P L GI  P
Sbjct:  197 CFLCGL----------GGELVVCEFPRCTKVYHQLCLGAFPFPTDEDTE---------WVCPRHSCVLSGRKEPPVQTS----------------------------TKSIWHCLHCPVAVDDTVLPSHPALSKISRREKTMV---CPHCNAPSPKVRLAKILERIWSVIATNRQGMPFCGPLLVGIDRP 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100233.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KC98_9PHAE3.530e-10261.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPU7_ECTSI2.970e-8869.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2GUQ6_9STRA2.750e-1126.52Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2SAQ8_9STRA1.680e-828.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A397FHH6_9STRA6.990e-826.32PHD domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A3L6VEF1_9STRA1.330e-726.32PHD-type domain-containing protein n=2 Tax=Aphanom... [more]
A0A6G0X3E3_9STRA1.610e-726.60Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A397DEQ7_9STRA1.890e-726.90PHD-type domain-containing protein n=1 Tax=Aphanom... [more]
A0A3R7E4K7_9STRA2.020e-726.90PHD-type domain-containing protein n=2 Tax=Aphanom... [more]
A0A6A4ZHF3_9STRA2.090e-726.32PHD-type domain-containing protein n=2 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 79..162
e-value: 4.4E-6
score: 28.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100233contigH-elongata_contig100233:485..2320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100233.29.1mRNA_H-elongata_contig100233.29.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100233 485..2320 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100233.29.1 ID=prot_H-elongata_contig100233.29.1|Name=mRNA_H-elongata_contig100233.29.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=449bp
PYANASHALAKLGVPVALPGGGRGAAPQQLHLQQTVQQLQATQHLATHRA
FNGGDRGSLPAATGSRRASTAVSKEAASCLPPCFMCGEDVTHWGMNAGNG
EAIKCARDGCDRVFHVTCVAHLLRDAAACTPGGSGAAAGTWECPIHHCAR
CGVDENGLQLGASARQVPAGDIHWGGRHGGNERELGGNRSRRLWQCTWCS
VAFCLSHLPPQLATAGRKARVADANQCVHCRSPSPRVKLAILLEKMCSRL
ANHHLAIPFLRPFLPGIASPLKNEEDPAEASLGVSGLTAPQPGKAGKGQA
VTEASASVTTPEASTRGGDESDDLVVFDAEPIPIHPIKRHRVEWEGATAM
APSLKPRGLEGEVEATGVTVVGAVEAVGKIHVAQSVQSPQQAQGGGGRTR
KRSLPSAAMSRAGGCRSAKPVSSPLLPPRPDPEPSAAVGPVEGEPSGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD